Volume 17, Number 1, January 2001 Ditorial
, Golan Yona
: Variations on probabilistic suffix trees: statistical modeling and prediction of protein families.
: A Web interface generator for molecular biology programs in Unix.
Volume 17, Numer 2, February Editorial
: On the Importance of Standardisation in Life Sciences.
: Distribution of genes for lysine biosynthesis through the aminoadipate pathway among prokaryotic genomes.
P. M. Stothard
: COMBOSA3D: combining sequence alignments with three-dimensional structures.
Volume 17, Number 3, March 2001 Original Papers
Kurt S. Thorn
, Andrew A. Bogan
: ASEdb: a database of alanine mutations and their effects on the free energy of binding in protein interactions.
, Douglas B. Kell
: MEG (Model Extender for Gepasi): a program for the modelling of complex, heterogeneous, cellular systems.
Volume 17, Number 4, April 2001 Editorial
Volume 17, Number 5, May 2001 Editorial
: Bioinformatics needs to adopt statistical thinking - Editorial.
: Comparison of genomic DNA sequences: solved and unsolved problems.
Alexander V. Lukashin
, Rainer Fuchs
: Analysis of temporal gene expression profiles: clustering by simulated annealing and determining the optimal number of clusters.
: Efficient large-scale sequence comparison by locality-sensitive hashing.
: A-Cell: graphical user interface for the construction of biochemical reaction models.
Volume 17, Number 6, June 2001 Editorial
: ExScript: An `EX'-Centric Approach to the Description of Transcript Diversity.
, Anthony D. Long
: A Bayesian framework for the analysis of microarray expression data: regularized t -test and statistical inferences of gene changes.
: Prediction of quaternary structure from primary structure.
John M. Ward
: Identification of novel families of membrane proteins from the model plant Arabidopsis thaliana.
Malay Kumar Basu
: SeWeR: a customizable and integrated dynamic HTML interface to bioinformatics services.
Volume 17, Supplement, June 2001 Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, July 21-25, 2001, Copenhagen, Denmark.
Volume 17, Number 7, July 2001 Editorial
: T-REX: reconstructing and visualizing phylogenetic trees and reticulation networks.
: A Java applet for visualizing protein-protein interaction.
Volume 17, Number 8, August 2001 Original Papers
, Birong Hu
: Evaluation of protein multiple alignments by SAM-T99 using the BAliBASE multiple alignment test set.
, Zhirong Sun
: Support vector machine approach for protein subcellular localization prediction.
: SIR: a simple indexing and retrieval system for biological flat file databases.
Volume 17, Number 9, September 2001 Editorial
: A non-parametric approach to translating gene region heterogeneity associated with phenotype into location heterogeneity.
Volume 17, Number 10, October 2001 Editorial
, Eugene V. Koonin
, Chris Burge
, James W. Fickett
, John Logsdon
, Andrej Sali
, Gary D. Stormo
, Igor B. Zhulin
: The Third Georgia Tech-Emory International Conference on Bioinformatics: In Silico Biology; Bioinformatics After Human Genome (November 15-18, 2001, Atlanta, Georgia, USA).
R. R. Mallios
: Predicting class II MHC/peptide multi-level binding with an iterative stepwise discriminant analysis meta-algorithm.
Volume 17, Number 11, November 2001 Editorial
Volume 17, Number 12, December 2001 Editorial
: Towards Computer Aided Design (CAD) of Useful Microorganisms.
: How to reconstruct a large genetic network from n gene perturbations in fewer than n2 easy steps.
Michael V. Boland
, Robert F. Murphy
: A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells.
: Evolution of amino acid biosynthesis and enzymes with broad substrate specificity.
Nicolas Le Novère
: MELTING, computing the melting temperature of nucleic acid duplex.
, Michael Q. Zhang
: Promoter Extraction from GenBank (PEG): automatic extraction of eukaryotic promoter sequences in large sets of genes.
: ToolShop: prerelease inspections for protein structure prediction servers.