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Steve Pettifer

Stephen Pettifer – Stephen Robert Pettifer

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Books and Theses

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1999
[b1]
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Stephen Robert Pettifer:
An operating environment for large scale virtual reality. University of Manchester, UK, 1999

Journal Articles

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2025
[j29]
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David Petrescu, Paul A. Warren, Zahra Montazeri, Gabriel Strain, Steve Pettifer:
The Effects of Visual Behavior and Ego-Movement on Foveated Rendering Performance in Virtual Reality. SN Comput. Sci. 6(4): 386 (2025)
2016
[j28]
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Alexandru Constantin, Silvio Peroni, Steve Pettifer, David M. Shotton, Fabio Vitali:
The Document Components Ontology (DoCO). Semantic Web 7(2): 167-181 (2016)
2014
[j27]
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Alasdair J. G. Gray, Paul Groth, Antonis Loizou, Sune Askjaer, Christian Y. A. Brenninkmeijer, Kees Burger, Christine Chichester, Chris T. A. Evelo, Carole A. Goble, Lee Harland, Steve Pettifer, Mark Thompson, Andra Waagmeester, Antony J. Williams:
Applying linked data approaches to pharmacology: Architectural decisions and implementation. Semantic Web 5(2): 101-113 (2014)
[j26]
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Paul Groth, Antonis Loizou, Alasdair J. G. Gray, Carole A. Goble, Lee Harland, Steve Pettifer:
API-centric Linked Data integration: The Open PHACTS Discovery Platform case study. J. Web Semant. 29: 12-18 (2014)
2013
[j25]
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Jon C. Ison, Matús Kalas, Inge Jonassen, Dan M. Bolser, Mahmut Uludag, Hamish McWilliam, James Malone, Rodrigo Lopez, Steve Pettifer, Peter M. Rice:
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats. Bioinform. 29(10): 1325-1332 (2013)
[j24]
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Andy Brown, Robert Stevens, Steve Pettifer:
Making Graph-Based Diagrams Work in Sound: The Role of Annotation. Hum. Comput. Interact. 28(3): 193-221 (2013)
2012
[j23]
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Bas Vroling, David Thorne, Philip McDermott, Henk-Jan Joosten, Teresa K. Attwood, Steve Pettifer, Gert Vriend:
NucleaRDB: information system for nuclear receptors. Nucleic Acids Res. 40(Database-Issue): 377-380 (2012)
2011
[j22]
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Bas Vroling, David Thorne, Philip McDermott, Teresa K. Attwood, Gert Vriend, Steve Pettifer:
Integrating GPCR-specific information with full text articles. BMC Bioinform. 12: 362 (2011)
[j21]
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Steve Pettifer, Philip McDermott, James Marsh, David Thorne, Alice Villéger, Terri K. Attwood:
Ceci n'est pas un hamburger: modelling and representing the scholarly article. Learn. Publ. 24(3): 207-220 (2011)
2010
[j20]
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Alice Villéger, Stephen Pettifer, Douglas B. Kell:
Arcadia: a visualization tool for metabolic pathways. Bioinform. 26(11): 1470-1471 (2010)
[j19]
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Terri K. Attwood, Douglas B. Kell, Philip McDermott, James Marsh, Stephen Pettifer, David Thorne:
Utopia documents: linking scholarly literature with research data. Bioinform. 26(18) (2010)
[j18]
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Matús Kalas, Pål Puntervoll, Alexandre Joseph, Edita Bartaseviciute, Armin Töpfer, Prabakar Venkataraman, Steve Pettifer, Jan Christian Bryne, Jon C. Ison, Christophe Blanchet, Kristoffer Rapacki, Inge Jonassen:
BioXSD: the common data-exchange format for everyday bioinformatics web services. Bioinform. 26(18) (2010)
[j17]
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Alain Coletta, John W. Pinney, David Y. Weiss Solís, James Marsh, Steve Pettifer, Teresa K. Attwood:
Low-complexity regions within protein sequences have position-dependent roles. BMC Syst. Biol. 4: 43 (2010)
[j16]
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Steve Pettifer, Jon C. Ison, Matús Kalas, Dave Thorne, Philip McDermott, Inge Jonassen, Ali Liaquat, José María Fernández, José Manuel Rodriguez, David G. Pisano, Christophe Blanchet, Mahmut Uludag, Peter M. Rice, Edita Bartaseviciute, Kristoffer Rapacki, Maarten L. Hekkelman, Olivier Sand, Heinz Stockinger, Andrew B. Clegg, Erik Bongcam-Rudloff, Jean Salzemann, Vincent Breton, Teresa K. Attwood, Graham Cameron, Gert Vriend:
The EMBRACE web service collection. Nucleic Acids Res. 38(Web-Server-Issue): 683-688 (2010)
[j15]
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Jiten Bhagat, Franck Tanoh, Eric Nzuobontane, Thomas Laurent, Jerzy Orlowski, Marco Roos, Katy Wolstencroft, Sergejs Aleksejevs, Robert Stevens, Steve Pettifer, Rodrigo Lopez, Carole A. Goble:
BioCatalogue: a universal catalogue of web services for the life sciences. Nucleic Acids Res. 38(Web-Server-Issue): 689-694 (2010)
[j14]
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Maarten L. Hekkelman, Tim A. H. te Beek, Steve Pettifer, David Thorne, Terri K. Attwood, Gert Vriend:
WIWS: a protein structure bioinformatics Web service collection. Nucleic Acids Res. 38(Web-Server-Issue): 719-723 (2010)
2009
[j13]
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Steve Pettifer, David Thorne, Philip McDermott, Terri K. Attwood, J. Baran, Jan Christian Bryne, Taavi Hupponen, D. Mowbray, Gert Vriend:
An active registry for bioinformatics web services. Bioinform. 25(16): 2090-2091 (2009)
[j12]
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Steve Pettifer, David Thorne, Philip McDermott, James Marsh, Alice Villéger, Douglas B. Kell, Teresa K. Attwood:
Visualising biological data: a semantic approach to tool and database integration. BMC Bioinform. 10(S-6) (2009)
2008
[j11]
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Heinz Stockinger, Teresa K. Attwood, Shahid Nadeem Chohan, Richard G. Côté, Philippe Cudré-Mauroux, Laurent Falquet, Pedro L. Fernandes, Robert D. Finn, Taavi Hupponen, Eija Korpelainen, Alberto Labarga, Aurélie Laugraud, Tania Lima, Evangelos Pafilis, Marco Pagni, Steve Pettifer, Isabelle Phan, Nazim Rahman:
Experience using web services for biological sequence analysis. Briefings Bioinform. 9(6): 493-505 (2008)
[j10]
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Duncan Hull, Steve Pettifer, Douglas B. Kell:
Defrosting the Digital Library: Bibliographic Tools for the Next Generation Web. PLoS Comput. Biol. 4(10) (2008)
2007
[j9]
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Manuel Corpas, James Sinnott, Dave Thorne, Steve Pettifer, Terri K. Attwood, et al.:
PFF - an integrated database of residues and fragments critical for protein folding. BMC Syst. Biol. 1(S-1): P48 (2007)
[j8]
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Craig D. Murray, Jezz Fox, Steve Pettifer:
Absorption, dissociation, locus of control and presence in virtual reality. Comput. Hum. Behav. 23(3): 1347-1354 (2007)
[j7]
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John M. Brooke, James Marsh, Steve Pettifer, L. S. Sastry:
The importance of locality in the visualization of large datasets. Concurr. Comput. Pract. Exp. 19(2): 195-205 (2007)
2006
[j6]
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Craig D. Murray, Emma Patchick, Stephen Pettifer, Fabrice Caillette, Toby Howard:
Immersive Virtual Reality as a Rehabilitative Technology for Phantom Limb Experience: A Protocol. Cyberpsychology Behav. Soc. Netw. 9(2): 167-170 (2006)
[j5]
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James Marsh, Mashhuda Glencross, Steve Pettifer, Roger J. Hubbold:
A Network Architecture Supporting Consistent Rich Behavior in Collaborative Interactive Applications. IEEE Trans. Vis. Comput. Graph. 12(3): 405-416 (2006)
2004
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Andy Brown, Steve Pettifer, Robert Stevens:
Evaluation of a non-visual molecule browser. ACM SIGACCESS Access. Comput. 77-78: 40-47 (2004)
2002
[j3]
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  - journals/jnca/EconomouMP02
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Daphne Economou, William L. Mitchell, Steve Pettifer:
Problem driven CVE technology development. J. Netw. Comput. Appl. 25(4): 243-262 (2002)
2001
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Roger J. Hubbold, Jonathan Cook, Martin J. Keates, Simon Gibson, Toby Howard, Alan Murta, Adrian J. West, Steve Pettifer:
GNU/MAVERIK: A micro-kernel for large-scale virtual environments. Presence Teleoperators Virtual Environ. 10(1): 22-34 (2001)
2000
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Craig D. Murray, John M. Bowers, Adrian J. West, Steve Pettifer, Simon Gibson:
Navigation, Wayfinding and Place Experience within a Virtual City. Presence Teleoperators Virtual Environ. 9(5): 435-447 (2000)

Conference and Workshop Papers

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2025
[c42]
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Paul Christopher Gloumeau, Stephen Robert Pettifer:
Intuitive Visual Feedback in Virtual Reality for the Teleoperation of Robots. VR 2025: 115-124
2024
[c41]
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David Petrescu, Paul A. Warren, Zahra Montazeri, Gabriel Strain, Steve Pettifer:
Thinking on Your Feet: Enhancing Foveated Rendering in Virtual Reality During User Activity. VISIGRAPP (1): GRAPP, HUCAPP, IVAPP 2024: 140-150
[c40]
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Paul Christopher Gloumeau, Stephen Robert Pettifer:
Exploring Visual Conditions in Virtual Reality for the Teleoperation of Robots. VRST 2024: 16:1-16:10
2023
[c39]
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David Petrescu, Paul A. Warren, Zahra Montazeri, Boris Otkhmezuri, Steve Pettifer:
Foveated Walking: Translational Ego-Movement and Foveated Rendering. SAP 2023: 7:1-7:8
[c38]
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David Petrescu, Paul A. Warren, Zahra Montazeri, Steve Pettifer:
Velocity-Based LOD Reduction in Virtual Reality: A Psychophysical Approach. Eurographics (Short Papers) 2023: 41-44
2020
[c37]
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Pejman Saeghe, Gavin Abercrombie, Bruce Weir, Sarah Clinch, Stephen Pettifer, Robert Stevens:
Augmented Reality and Television: Dimensions and Themes. IMX 2020: 13-23
2019
[c36]
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James Marsh, Stephen Pettifer, Cliff Richardson, Jai Kulkarni:
Experiences of treating phantom limb pain using immersive virtual reality. SIGGRAPH Talks 2019: 16:1-16:2
[c35]
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Pejman Saeghe, Sarah Clinch, Bruce Weir, Maxine Glancy, Vinoba Vinayagamoorthy, Ollie Pattinson, Stephen Robert Pettifer, Robert Stevens:
Augmenting Television With Augmented Reality. TVX 2019: 255-261
2014
[c34]
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Colin R. Batchelor, Christian Y. A. Brenninkmeijer, Christine Chichester, Mark Davies, Daniela Digles, Ian Dunlop, Chris T. A. Evelo, Anna Gaulton, Carole A. Goble, Alasdair J. G. Gray, Paul Groth, Lee Harland, Karen Karapetyan, Antonis Loizou, John P. Overington, Steve Pettifer, Jon Steele, Robert Stevens, Valery Tkachenko, Andra Waagmeester, Antony J. Williams, Egon L. Willighagen:
Scientific Lenses to Support Multiple Views over Linked Chemistry Data. ISWC (1) 2014: 98-113
2013
[c33]
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Alexandru Constantin, Steve Pettifer, Andrei Voronkov:
PDFX: fully-automated PDF-to-XML conversion of scientific literature. ACM Symposium on Document Engineering 2013: 177-180
[c32]
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Christian Y. A. Brenninkmeijer, Carole A. Goble, Alasdair J. G. Gray, Paul Groth, Antonis Loizou, Steve Pettifer:
Including Co-referent URIs in a SPARQL Query. COLD 2013
[c31]
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Christian Y. A. Brenninkmeijer, Ian Dunlop, Carole A. Goble, Alasdair J. G. Gray, Steve Pettifer, Robert Stevens:
Computing Identity Co-Reference Across Drug Discovery Datasets. SWAT4LS 2013
[c30]
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Ian Dunlop, Rishi Ramgolam, Steve Pettifer, Alasdair J. G. Gray, James M. Eales, Carole A. Goble, Jan Velterop:
OpenPHACTS Explorer 2: Bringing the Web to the Semantic Web. SWAT4LS 2013
2012
[c29]
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Philip McDermott, Steve Pettifer, Paul Abeles:
ASARM - A System for CFS/ME Monitoring and Treatment. BIODEVICES 2012: 160-166
[c28]
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Steve Pettifer, Toby Howard, Benjamin James Blundell, David Edwards, Ilan Lieberman:
An Immersive Virtual Environment for Phantom Limb Pain Rehabilitation. GRAPP/IVAPP 2012: 426-433
[c27]
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Alasdair J. G. Gray, Sune Askjaer, Christian Y. A. Brenninkmeijer, Kees Burger, Christine Chichester, James M. Eales, Chris T. A. Evelo, Carole A. Goble, Paul Groth, Lee Harland, Antonis Loizou, Steve Pettifer, Rishi Ramgolam, Mark Thompson, Andra Waagmeester, Antony J. Williams:
The Pharmacology Workspace: A Platform for Drug Discovery. ICBO 2012
[c26]
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Christian Y. A. Brenninkmeijer, Chris T. A. Evelo, Carole A. Goble, Alasdair J. G. Gray, Paul Groth, Steve Pettifer, Robert Stevens, Antony J. Williams, Egon L. Willighagen:
Scientific Lenses over Linked Data: An Approach to Support Task Specific Views of the Data. A Vision. LISC@ISWC 2012
2011
[c25]
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Paul Thompson, Yoshinobu Kano, John McNaught, Steve Pettifer, Teresa K. Attwood, John A. Keane, Sophia Ananiadou:
Promoting Interoperability of Resources in META-SHARE. Workshop on Language Resources@IJCNLP 2011: 50-58
2010
[c24]
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Paolo Missier, Katy Wolstencroft, Franck Tanoh, Peter Li, Sean Bechhofer, Khalid Belhajjame, Steve Pettifer, Carole A. Goble:
Functional Units: Abstractions for Web Service Annotations. SERVICES 2010: 306-313
2007
[c23]
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Steve Pettifer, Katy Wolstencroft, Pinar Alper, Teresa K. Attwood, Alain Coletta, Carole A. Goble, Peter Li, Philip McDermott, James Marsh, Tom Oinn, James Sinnott, David Thorne:
^myGrid and UTOPIA: An Integrated Approach to Enacting and Visualising in Silico Experiments in the Life Sciences. DILS 2007: 59-70
2006
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Benjamin James Blundell, Gary Ng, Steve Pettifer:
A visualization framework for design and evaluation. Visualization and Data Analysis 2006: 606008
2005
[c21]
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Dave Thorne, Steve Pettifer, Terri K. Attwood:
Integrating Abstract and Physical Molecular Model Interaction. TPCG 2005: 75-82
2004
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  - conf/assets/BrownPS04
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Andy Brown, Steve Pettifer, Robert Stevens:
Evaluation of a non-visual molecule browser. ASSETS 2004: 40-47
[c19]
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Andy Brown, Robert Stevens, Steve Pettifer:
Issues in the Non-Visual Presentation of Graph Based Diagrams. IV 2004: 671-676
[c18]
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Benjamin James Blundell, Steve Pettifer:
Requirements for the Visualisation of Ontological Evolution. TPCG 2004: 18-23
[c17]
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James Marsh, Mashhuda Glencross, Steve Pettifer, Roger J. Hubbold, Jonathan Cook, Sylvain Daubrenet:
Minimising latency and maintaining consistency in distributed virtual prototyping. VRCAI 2004: 386-389
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James Marsh, Steve Pettifer, Daniel Hanlon, Stephen Pickles, Jon MacLaren, Martyn Foster:
GRENADE: A Grid Enabled Desktop Environment. WETICE 2004: 343-344
2003
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Luc Moreau, Simon Miles, Carole A. Goble, Robert Mark Greenwood, Vijay Dialani, Matthew Addis, Mahmut Nedim Alpdemir, Rich Cawley, David De Roure, Justin Ferris, Robert J. Gaizauskas, Kevin Glover, Chris Greenhalgh, Peter Li, Xiaojian Liu, Phillip W. Lord, Michael Luck, Darren Marvin, Thomas M. Oinn, Norman W. Paton, Steve Pettifer, Milena V. Radenkovic, Angus Roberts, Alan J. Robinson, Tom Rodden, Martin Senger, Nick Sharman, Robert Stevens, Brian Warboys, Anil Wipat, Chris Wroe:
On the Use of Agents in BioInformatics Grid. CCGRID 2003: 653-660
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Sylvain Daubrenet, Steve Pettifer:
A Unifying Model for the Composition and Simulation of Behaviours in Distributed Virtual Environments. TPCG 2003: 201-208
2002
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Mojtaba Hosseini, Steve Pettifer, Nicolas D. Georganas:
Visibility-based interest management in collaborative virtual environments. CVE 2002: 143-144
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Mashhuda Glencross, James Marsh, Jonathan Cook, Sylvain Daubrenet, Steve Pettifer, Roger J. Hubbold:
DIVIPRO: Distributed Interactive VIrtual PROtotoyping. SIGGRAPH Abstracts and Applications 2002: 170
2001
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Ashweeni Kumar Beeharee, Steve Pettifer, Adrian J. West:
A Framework for Optimising Network Usage for Plausible Distributed Virtual Environments. Virtual Reality: Cognitive Foundations, Technological Issues & Philosophical Implications 2001: 141-158
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Daphne Economou, William L. Mitchell, Steve Pettifer, Jonathan Cook, James Marsh:
User centred virtual actor technology. Virtual Reality, Archeology, and Cultural Heritage 2001: 323-332
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Mashhuda Glencross, Toby Howard, Steve Pettifer:
Iota: An Approach to Physically-Based Modelling in Virtual Environments. VR 2001: 287-288
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Steve Pettifer, Jonathan Cook, John A. Mariani, Jonathan Trevor:
Exploring Realtime Visualisation of Large Abstract Data Spaces with QSPACE. VR 2001: 293-294
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Steve Pettifer, James Marsh:
A Collaborative Access Model for Shared Virtual Environments. WETICE 2001: 257-262
2000
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William L. Mitchell, Daphne Economou, Steve Pettifer, Adrian J. West:
Choosing and using a driving problem for CVE technology development. VRST 2000: 16-24
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Steve Pettifer, Jonathan Cook, James Marsh, Adrian J. West:
DEVA3: architecture for a large-scale distributed virtual reality system. VRST 2000: 33-40
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Daphne Economou, William L. Mitchell, Steve Pettifer, Adrian J. West:
CVE Technology Development Based on Real World Application and User Needs. WETICE 2000: 12-20
1999
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Roger J. Hubbold, Jonathan Cook, Martin J. Keates, Simon Gibson, Toby Howard, Alan Murta, Adrian J. West, Steve Pettifer:
GNU/MAVERIK: a micro-kernel for large-scale virtual environments. VRST 1999: 66-73
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Daphne Economou, Steve Pettifer, William L. Mitchell, Adrian J. West:
The Kahun project: CVE technology development based on real world application and user needs. VRST 1999: 168-169
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Steve Pettifer, Adrian J. West:
Subjectivity and the relaxing of synchronization in networked virtual environments. VRST 1999: 170-171

Parts in Books or Collections

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2005
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Steve Pettifer, James Sinnott, Teresa K. Attwood:
Integrated Approaches for Bioinformatic Data Analysis and Visualization - Challenges, Opportunities and New Solutions. Data Analysis and Visualization in Genomics and Proteomics 2005: 135-152
2004
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Carole A. Goble, Chris Greenhalgh, Steve Pettifer, Robert Stevens:
Knowledge Integration. The Grid 2, 2nd Edition 2004: 121-134

Informal and Other Publications

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What is the meaning of the colors in the publication lists?

2023
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David Petrescu, Paul A. Warren, Zahra Montazeri, Stephen Pettifer:
Velocity-Based LOD Reduction in Virtual Reality: A Psychometric Approach. CoRR abs/2301.09394 (2023)
2016
[i1]
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Tanmay Basu, Shraman Kumar, Abhishek Kalyan, Priyanka Jayaswal, Pawan Goyal, Stephen Pettifer, Siddhartha Jonnalagadda:
A Novel Framework to Expedite Systematic Reviews by Automatically Building Information Extraction Training Corpora. CoRR abs/1606.06424 (2016)

Coauthor Index

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