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Nicolas Maillet , Guillaume Collet , Thomas Vannier , Dominique Lavenier , Pierre Peterlongo : Commet: Comparing and combining multiple metagenomic datasets. BIBM 2014 : 94-98 export record
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journals/corr/PeterlongoST14 share record
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Pietro Peterlongo , Massimiliano Sala , Claudia Tinnirello : A Discrete Logarithm-based Approach to Compute Low-Weight Multiples of Binary Polynomials. CoRR abs/1411.4024 (2014 )2012 export record
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journals/bmcbi/MailletLCLP12 share record
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Nicolas Maillet , Claire Lemaitre , Rayan Chikhi , Dominique Lavenier , Pierre Peterlongo : Compareads: comparing huge metagenomic experiments. BMC Bioinform. 13 (S-19 ) : S10 (2012 )export record
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journals/bmcbi/PeterlongoC12 share record
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Pierre Peterlongo , Rayan Chikhi : Mapsembler, targeted and micro assembly of large NGS datasets on a desktop computer. BMC Bioinform. 13 : 48 (2012 )export record
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journals/bmcbi/SacomotoKCUASPL12 share record
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Gustavo Akio Tominaga Sacomoto , Janice Kielbassa , Rayan Chikhi , Raluca Uricaru , Pavlos Antoniou , Marie-France Sagot , Pierre Peterlongo , Vincent Lacroix : KISSPLICE: de-novo calling alternative splicing events from RNA-seq data. BMC Bioinform. 13 (S-6 ) : S5 (2012 )export record
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conf/stringology/HolleyP12 share record
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Guillaume Holley , Pierre Peterlongo : BlastGraph: Intensive Approximate Pattern Matching in Sequence Graphs and de-Bruijn Graphs. Stringology 2012 : 53-63 2011 export record
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conf/stringology/FedericoPPS11 share record
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Maria Federico , Pierre Peterlongo , Nadia Pisanti , Marie-France Sagot : Finding Long and Multiple Repeats with Edit Distance. Stringology 2011 : 83-97 2010 share record
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Maria Federico , Pierre Peterlongo , Nadia Pisanti : An optimized filter for finding multiple repeats in DNA sequences. AICCSA 2010 : 1-8 export record
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conf/spire/PeterlongoSPSL10 share record
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Pierre Peterlongo , Nicolas Schnel , Nadia Pisanti , Marie-France Sagot , Vincent Lacroix : Identifying SNPs without a Reference Genome by Comparing Raw Reads. SPIRE 2010 : 147-158 2009 export record
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journals/almob/PeterlongoSLPS09 share record
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Pierre Peterlongo , Gustavo Akio Tominaga Sacomoto , Alair Pereira do Lago , Nadia Pisanti , Marie-France Sagot : Lossless filter for multiple repeats with bounded edit distance. Algorithms Mol. Biol. 4 (2009 )share record
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Matthias Gallé , Pierre Peterlongo , François Coste : In-Place Update of Suffix Array while Recoding Words. Int. J. Found. Comput. Sci. 20 (6 ) : 1025-1045 (2009 )export record
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conf/prib/PeterlongoNLVQ09 share record
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Pierre Peterlongo , Jacques Nicolas , Dominique Lavenier , Raoul Vorc'h , Joël Querellou : c-GAMMA: Comparative Genome Analysis of Molecular Markers. PRIB 2009 : 255-269 2008 export record
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journals/bmcbi/PeterlongoNLNKG08 share record
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Pierre Peterlongo , Laurent Noé , Dominique Lavenier , Van Hoa Nguyen , Gregory Kucherov , Mathieu Giraud : Optimal neighborhood indexing for protein similarity search. BMC Bioinform. 9 (2008 )export record
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journals/ijfcs/PeterlongoAS08 share record
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Pierre Peterlongo , Julien Allali , Marie-France Sagot : Indexing Gapped-Factors Using a Tree. Int. J. Found. Comput. Sci. 19 (1 ) : 71-87 (2008 )export record
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journals/jda/PeterlongoPBLS08 share record
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Pierre Peterlongo , Nadia Pisanti , Frédéric Boyer , Alair Pereira do Lago , Marie-France Sagot : Lossless filter for multiple repetitions with Hamming distance. J. Discrete Algorithms 6 (3 ) : 497-509 (2008 )export record
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conf/stringology/GallePC08 share record
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Matthias Gallé , Pierre Peterlongo , François Coste : In-place Update of Suffix Array while Recoding Words. Stringology 2008 : 54-67 2007 share record
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Pavlos Antoniou , Maxime Crochemore , Costas S. Iliopoulos , Pierre Peterlongo : Application of suffix trees for the acquisition of common motifs with gaps in a set of strings. LATA 2007 : 57-66 export record
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conf/ppam/PeterlongoNLGJKG07 share record
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Pierre Peterlongo , Laurent Noé , Dominique Lavenier , Gilles Georges , Julien Jacques , Gregory Kucherov , Mathieu Giraud : Protein Similarity Search with Subset Seeds on a Dedicated Reconfigurable Hardware. PPAM 2007 : 1240-1248 2006 share record
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Pierre Peterlongo : Filtrage de séquences d'ADN pour la recherche de longues répétitions multiples. (DNA sequence filtration for the problem of finding long multiple repetitions). University of Marne-la-Vallée, Marne la Vallée, France, 2006 export record
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conf/stringology/PeterlongoAS06 share record
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Pierre Peterlongo , Julien Allali , Marie-France Sagot : The gapped-factor tree. Stringology 2006 : 182-196 share record
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Pavlos Antoniou , Jan Holub , Costas S. Iliopoulos , Borivoj Melichar , Pierre Peterlongo : Finding Common Motifs with Gaps Using Finite Automata. CIAA 2006 : 69-77 2005 export record
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journals/ijfcs/IliopoulosMPPRS05 share record
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Costas S. Iliopoulos , James A. M. McHugh , Pierre Peterlongo , Nadia Pisanti , Wojciech Rytter , Marie-France Sagot : A first approach to finding common motifs with gaps. Int. J. Found. Comput. Sci. 16 (6 ) : 1145-1154 (2005 )export record
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conf/spire/PeterlongoPBS05 share record
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Pierre Peterlongo , Nadia Pisanti , Frédéric Boyer , Marie-France Sagot : Lossless Filter for Finding Long Multiple Approximate Repetitions Using a New Data Structure, the Bi-factor Array. SPIRE 2005 : 179-190 2004 export record
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conf/stringology/IliopoulosMPPRS04 share record
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Costas S. Iliopoulos , James A. M. McHugh , Pierre Peterlongo , Nadia Pisanti , Wojciech Rytter , Marie-France Sagot : A First Approach to Finding Common Motifs With Gaps. Stringology 2004 : 88-97