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Journal Articles
- 2024
[j6]Hyun Jung Lee, Utku Ozbulak
, Homin Park, Stephen Depuydt, Wesley De Neve, Joris Vankerschaver:
Assessing the reliability of point mutation as data augmentation for deep learning with genomic data. BMC Bioinform. 25(1): 170 (2024)- 2023
- [j5]Ho-min Park, Jongbum Won, Yunseol Park, Esla Timothy Anzaku, Joris Vankerschaver, Arnout Van Messem, Wesley De Neve, Hyunjin Shim:
CRISPR-Cas-Docker: web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins. BMC Bioinform. 24(1): 167 (2023) - [j4]Utku Ozbulak, Hyun Jung Lee, Beril Boga, Esla Timothy Anzaku, Ho-min Park, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver:
Know Your Self-supervised Learning: A Survey on Image-based Generative and Discriminative Training. Trans. Mach. Learn. Res. 2023 (2023) - 2022
- [j3]Joris Vankerschaver, Steven J. Kern, Robert Kern:
VPsearch: fast exact sequence similarity search for genomic sequences. J. Open Source Softw. 7(78): 4236 (2022) - [j2]Dong Eui Chang, Matthew Perlmutter, Joris Vankerschaver:
Feedback Integrators for Mechanical Systems with Holonomic Constraints. Sensors 22(17): 6487 (2022) - 2014
- [j1]Joris Vankerschaver, Melvin Leok:
A Novel Formulation of Point Vortex Dynamics on the Sphere: Geometrical and Numerical Aspects. J. Nonlinear Sci. 24(1): 1-37 (2014)
Conference and Workshop Papers
- 2024
- [c7]Negin Harandi, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver:
Grasshopper Optimization Algorithm (GOA): A Novel Algorithm or A Variant of PSO? ANTS 2024: 84-97 - [c6]Utku Ozbulak, Esla Timothy Anzaku, Solha Kang, Wesley De Neve, Joris Vankerschaver:
Self-supervised Benchmark Lottery on ImageNet: Do Marginal Improvements Translate to Improvements on Similar Datasets? IJCNN 2024: 1-8 - [c5]Solha Kang, Joris Vankerschaver, Utku Ozbulak:
Identifying Critical Tokens for Accurate Predictions in Transformer-Based Medical Imaging Models. MLMI@MICCAI (2) 2024: 169-179 - 2023
- [c4]Khoa Tuan Nguyen, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve:
Towards Abdominal 3-D Scene Rendering from Laparoscopy Surgical Videos Using NeRFs. MLMI@MICCAI (1) 2023: 83-93 - 2012
- [c3]Scott David Kelly, Joris Vankerschaver:
Hamiltonian mechanics and nonlinear dynamics of a body subject to time-varying gyroscopic and potential forces. CDC 2012: 4436-4441 - 2010
- [c2]Joris Vankerschaver, Hiroaki Yoshimura, Melvin Leok, Jerrold E. Marsden:
Stokes-Dirac structures through reduction of infinite-dimensional Dirac structures. CDC 2010: 6265-6270 - 2009
- [c1]Yizhar Or, Joris Vankerschaver, Scott David Kelly, Richard M. Murray, Jerrold E. Marsden:
Geometric control of particle manipulation in a two-dimensional fluid. CDC 2009: 19-26
Informal and Other Publications
- 2023
- [i4]Utku Ozbulak, Hyun Jung Lee, Beril Boga, Esla Timothy Anzaku, Ho-min Park, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver:
Know Your Self-supervised Learning: A Survey on Image-based Generative and Discriminative Training. CoRR abs/2305.13689 (2023) - [i3]Woowon Jang, Shiwoo Koak, Jiwon Im, Utku Ozbulak, Joris Vankerschaver:
BRCA Gene Mutations in dbSNP: A Visual Exploration of Genetic Variants. CoRR abs/2309.00311 (2023) - [i2]Khoa Tuan Nguyen, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve:
Towards Abdominal 3-D Scene Rendering from Laparoscopy Surgical Videos using NeRFs. CoRR abs/2310.11645 (2023) - 2022
- [i1]Utku Ozbulak, Solha Kang, Jasper Zuallaert, Stephen Depuydt, Joris Vankerschaver:
Utilizing Mutations to Evaluate Interpretability of Neural Networks on Genomic Data. CoRR abs/2212.06151 (2022)
Coauthor Index
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