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ORCIDIWBBIO 2016: Granada, Spain
- Francisco M. Ortuño Guzman, Ignacio Rojas:
Bioinformatics and Biomedical Engineering - 4th International Conference, IWBBIO 2016, Granada, Spain, April 20-22, 2016, Proceedings. Lecture Notes in Computer Science 9656, Springer 2016, ISBN 978-3-319-31743-4
Bioinformatics for Healthcare and Diseases
- Giuseppe Lancia
, Paolo Serafini:
The Complexity of Some Pattern Problems in the Logical Analysis of Large Genomic Data Sets. 3-12 - Timothy A. Vincent, A. Wilson, John G. Hattersley, Michael J. Chappell, Julian W. Gardner:
Development of a Handheld Side-Stream Breath Analyser for Point of Care Metabolic Rate Measurement. 13-21 - Ana Paula Moreira Bezerra, Samara Cardoso Da Silva-Santiago, José Francisco Diogo Da Silva Jr., Emanuel Diego S. Penha, Monalisa M. Silveira, Myrna S. Ramos, Mônica Moraes Silva, Ana Carolina L. Pacheco, Diana Magalhaes de Oliveira:
Confluence of Genes Related to the Combined Etiology DOISm (Diabetes, Obesity, Inflammation and Metabolic Syndrome) in Dissecting Nutritional Phenotypes. 22-37 - A. Díez-Gandía, Rafael J. Villanueva, José Antonio Moraño, Luis Acedo, J. Mollar, J. Díez-Domingo:
Studying the Herd Immunity Effect of the Varicella Vaccine in the Community of Valencia, Spain. 38-46 - Ginés Almagro-Hernández, Francisco García-Sánchez, María Eugenia de la Morena-Barrio, Javier Corral, Jesualdo Tomás Fernández-Breis:
Angel: Towards a Multi-level Method for the Analysis of Variants in Individual Genomes. 47-58 - Adoración Zafra, José Carlos Jimenez-Lopez, Rosario Carmona, M. Gonzalo Claros, Juan de Dios Alché:
Transcriptome-Based Identification of a Seed Olive Legumin (11S Globulin). Characterization of Subunits, 3D Modelling and Molecular Assessment of Allergenicity. 59-70 - Hao Shen, Wen Zhang, Peng Chen, Jun Zhang, Aiqin Fang, Bing Wang:
A Feature Selection Scheme for Accurate Identification of Alzheimer's Disease. 71-81 - Horacio Emilio Pérez Sánchez, Jorge Peña-García, Helena den-Haan, Ricardo Rodríguez-Schmidt, José Pedro Cerón-Carrasco, Adriano N. Raposo, Mounira Bouarkat, Sid Ahmed Sabeur, Francisco Guillermo Díaz-Baños:
HYDROWEB, an Online Tool for the Calculation of Hydrodynamic Properties of Macromolecules. 82-90 - Nikola Stambuk, Pasko Konjevoda, Zoran Manojlovic, Renata Novak Kujundzic:
The Use of the Miyazawa-Jernigan Residue Contact Potential in Analyses of Molecular Interaction and Recognition with Complementary Peptides. 91-102 - Anna Krawczyk, Joanna Polanska:
Comparative Analysis of microRNA-Target Gene Interaction Prediction Algorithms - The Attempt to Compare the Results of Three Algorithms. 103-112 - Grzegorz Mrukwa, Grzegorz Drazek, Monika Pietrowska, Piotr Widlak, Joanna Polanska:
A Novel Divisive iK-Means Algorithm with Region-Driven Feature Selection as a Tool for Automated Detection of Tumour Heterogeneity in MALDI IMS Experiments. 113-124 - Joanna Zyla, Christophe Badie, Ghazi Alsbeih, Joanna Polanska:
Multigene P-value Integration Based on SNPs Investigation for Seeking Radiosensitivity Signatures. 125-134 - Borong Shao, Tim O. F. Conrad:
Epithelial-Mesenchymal Transition Regulatory Network-Based Feature Selection in Lung Cancer Prognosis Prediction. 135-146
Biomedical Image Analysis
- Hiroshi Noborio, Kaoru Watanabe, Masahiro Yagi, Yasuhiro Ida, Shigeki Nankaku, Katsuhiko Onishi, Masanao Koeda, Masanori Kon, Kosuke Matsui, Masaki Kaibori:
Tracking a Real Liver Using a Virtual Liver and an Experimental Evaluation with Kinect v2. 149-162 - Ramon Sancibrian, Maria C. Gutierrez-Diez, Carlos Redondo-Figuero, Esther G. Sarabia, Maria A. Benito-Gonzalez, Jose C. Manuel-Palazuelos:
Thermal Imaging-Based Muscular Activity in the Biomechanical Study of Surgeons. 163-174 - Antonio Pinti:
FCM-Based Method for MRI Segmentation of Anatomical Structure. 175-183 - Santiago Sanz-Estébanez, Javier Royuela-del-Val, Susana Merino-Caviedes, Ana Revilla-Orodea, Teresa Sevilla-Ruiz, Lucilio Cordero-Grande, Marcos Martín-Fernández, Carlos Alberola-López:
An Automated Tensorial Classification Procedure for Left Ventricular Hypertrophic Cardiomyopathy. 184-195 - Hiroshi Noborio, Kaoru Watanabe, Masahiro Yagi, Kentaro Takamoto, Shigeki Nankaku, Katsuhiko Onishi, Masanao Koeda, Masanori Kon, Kosuke Matsui, Masaki Kaibori:
Depth Image Matching Algorithm for Deforming and Cutting a Virtual Liver via Its Real Liver Image Captured Using Kinect v2. 196-205 - Hasan Koyuncu, Rahime Ceylan:
Optic Disc Segmentation with Kapur-ScPSO Based Cascade Multithresholding. 206-215
Biomedical Signal Analysis
- Wanda Krassowska Neu:
Uncertainty in 1D and 3D Models of a Fiber Stimulated by an External Electrode. 219-229 - Shirin Najdi, Ali Abdollahi Gharbali, José Manuel Fonseca:
A Comparison of Feature Ranking and Rank Aggregation Techniques in Automatic Sleep Stage Classification Based on Polysomnographic Signals. 230-241 - Imen Boulnemour, Bachir Boucheham, Slimane Benloucif:
Improved Dynamic Time Warping for Abnormality Detection in ECG Time Series. 242-253 - Pablo Pérez-Tirador, Gabriel Caffarena, Constantino A. García, Abraham Otero, Rafael Raya, Rodrigo García-Carmona:
Hardware Accelerator to Compute the Minimum Embedding Dimension of ECG Records. 254-265 - Kartik Lakhotia, Gabriel Caffarena, Alberto Gil, David G. Márquez, Abraham Otero, Madhav P. Desai:
Low-Power, Low-Latency Hermite Polynomial Characterization of Heartbeats Using a Field-Programmable Gate Array. 266-276 - Juan José Escobar, Julio Ortega, Jesús González, Miguel Damas:
Assessing Parallel Heterogeneous Computer Architectures for Multiobjective Feature Selection on EEG Classification. 277-289
Computational Systems for Modelling Biological Processes
- Chia-Chi Wang, Ying-Chi Lin, Yuan-Chung Lin, Syu-Ruei Jhang, Chun-Wei Tung:
Prediction of Proinflammatory Potentials of Engine Exhausts by Integrating Chemical and Biological Features. 293-303 - Jose A. Egea, José M. García:
Calculating Elementary Flux Modes with Variable Neighbourhood Search. 304-314 - Roberta Bardini, Alfredo Benso, Stefano Di Carlo, Gianfranco Politano, Alessandro Savino:
Using Nets-Within-Nets for Modeling Differentiating Cells in the Epigenetic Landscape. 315-321 - Rafael Sachetto Oliveira, Bernardo M. Rocha, Denise Burgarelli, Wagner Meira Jr., Rodrigo Weber dos Santos:
Simulations of Cardiac Electrophysiology Combining GPU and Adaptive Mesh Refinement Algorithms. 322-334 - Ruy Freitas Reis, Rodrigo Weber dos Santos, Marcelo Lobosco:
A Plasma Flow Model in the Interstitial Tissue Due to Bacterial Infection. 335-345 - Rafael Sachetto Oliveira, Bruno Gouvêa de Barros, Johnny Moreira Gomes, Marcelo Lobosco, Sergio Alonso Muñoz, Markus Bär, Rodrigo Weber dos Santos:
Reactive Interstitial and Reparative Fibrosis as Substrates for Cardiac Ectopic Pacemakers and Reentries. 346-357 - Nikola Stambuk, Pasko Konjevoda, Zoran Manojlovic:
Miyazawa-Jernigan Contact Potentials and Carter-Wolfenden Vapor-to-Cyclohexane and Water-to-Cyclohexane Scales as Parameters for Calculating Amino Acid Pair Distances. 358-365
eHealth
- Manuel Emilio Gegúndez-Arias, Carlos Ortega, Javier Garrido, Beatriz Ponte, Fatima Alvarez, Diego Marín:
Inter-observer Reliability and Agreement Study on Early Diagnosis of Diabetic Retinopathy and Diabetic Macular Edema Risk. 369-379 - Diego Marín, Manuel Emilio Gegúndez-Arias, Carlos Ortega, Javier Garrido, Beatriz Ponte, Fatima Alvarez:
Automated Detection of Diabetic Macular Edema Risk in Fundus Images. 380-390 - Hsiao-Hui Li, Mei-Hua Luo, Yuan-Hsun Liao:
Use of Mobile Application for Nutrition Health Education. 391-399
Tools for Next Generation Sequencing Data Analysis
- Rosario Carmona, Pedro Seoane, Adoración Zafra, María José Jiménez-Quesada, Juan de Dios Alché, M. Gonzalo Claros:
Automatic Workflow for the Identification of Constitutively-Expressed Genes Based on Mapped NGS Reads. 403-414 - Margarita Sanromán-Junquera, Inmaculada Mora-Jiménez, Arcadio García-Alberola, Antonio Caamaño-Fernández, José Luis Rojo-Álvarez:
Influence of Normalization on the Analysis of Electroanatomical Maps with Manifold Harmonics. 415-425 - Huijun Mai, Dinghua Li, Yifan Zhang, Henry Chi-Ming Leung, Ruibang Luo, Hing-Fung Ting, Tak Wah Lam:
AC-DIAMOND: Accelerating Protein Alignment via Better SIMD Parallelization and Space-Efficient Indexing. 426-433 - Wen Zhang, Jhin-Rong Lin, Rubén Nogales-Cadenas, Quanwei Zhang, Ying Cai, Zhengdong D. Zhang:
Prioritization of Schizophrenia Risk Genes by a Network-Regularized Logistic Regression Method. 434-445 - Beat Wolf, Pierre Kuonen, Thomas Dandekar:
GNATY: Optimized NGS Variant Calling and Coverage Analysis. 446-454 - Michael G. Sadovsky, Yulia Putintseva, Vladislav Birukov, Serafima Novikova, Konstantin V. Krutovsky:
De Novo Assembly and Cluster Analysis of Siberian Larch Transcriptome and Genome. 455-464
Assistive Technology for People with Neuromotor Disorders
- Jesús Salido, Oscar Déniz, Gloria Bueno García:
Sainet: An Image Processing App for Assistance of Visually Impaired People in Social Interaction Scenarios. 467-477 - Cristian Pérez-Fernández, Ana Sánchez-Kuhn, Rosa Cánovas, Pilar Flores, Fernando Sánchez-Santed:
The Effect of Transcranial Direct Current Stimulation (tDCS) Over Human Motor Function. 478-494 - Miguel A. Velasco, Rafael Raya, Luca Muzzioli, Daniela Morelli, Marco Iosa, Febo Cincotti, Eduardo Rocon de Lima:
Evaluation of Cervical Posture Improvement of Children with Cerebral Palsy After Physical Therapy with a HCI Based on Head Movements and Serious Videogames. 495-504 - Michael G. Sadovsky, Andrey Morgun, Alla Salmina, Natalia Kuvacheva, Elena Khilazheva, Elena Pozhilenkova:
Enriched Environment Affects Positively a Progression of Neurodegeneration: Elastic Maps-Based Analysis. 505-514
Fundamentals of Biological Dynamics and Maximization of the Information Extraction from the Experiments in the Biological Systems
- Renata Rychtáriková:
Clustering of Multi-image Sets Using Rényi Information Entropy. 517-526 - Dalibor Stys, Tomás Náhlík, Petr Machácek, Renata Rychtáriková, Mohammadmehdi Saberioon:
Least Information Loss (LIL) Conversion of Digital Images and Lessons Learned for Scientific Image Inspection. 527-536 - Petr Císar, Tomás Náhlík, Renata Rychtáriková, Petr Machácek:
Visual Exploration of Principles of Formation of Microscopic Image Intensities Using Image Explorer Software. 537-544 - Stepán Papácek, Stefan Kindermann:
On Optimization of FRAP Experiments: Model-Based Sensitivity Analysis Approach. 545-556 - Enrique Larios Vargas, Zhihan Xia, Joris Slob, Fons J. Verbeek:
A Semantic-Based Metadata Validation for an Automated High-Throughput Screening Workflow: Case Study in CytomicsDB. 557-572 - Magdalena Ochab, Krzysztof Puszynski, Andrzej Swierniak:
Reachability of the Therapeutic Target in the Systems with Parameters Switch. 573-584
High Performance Computing in Bioinformatics, Computational Biology and Computational Chemistry
- Ahmed Abdullah Ali, Mohamed El-Kalioby, Mohamed Abouelhoda:
The Case for Docker in Multicloud Enabled Bioinformatics Applications. 587-601 - Sidi Ahmed Mahmoudi, Mohammed Ammar, Guillaume Luque Joris, Amine Abbou:
Real Time GPU-Based Segmentation and Tracking of the Left Ventricle on 2D Echocardiography. 602-614 - Antonio Llanes, Carlos Vélez, Antonia M. Sánchez, Horacio Emilio Pérez Sánchez, José M. Cecilia:
Parallel Ant Colony Optimization for the HP Protein Folding Problem. 615-626 - Francisco Nurudín Álvarez, José Antonio Cabrera, Juan Francisco Chico, Jesús Pérez, Manuel Ujaldon:
Neuroimaging Registration on GPU: Energy-Aware Acceleration. 627-638 - Yamandú González, Pablo Ezzatti, Margot Paulino:
Unleashing the Graphic Processing Units-Based Version of NAMD. 639-650
Human Behavior Monitoring, Analysis and Understanding
- Ami Ogawa, Ayanori Yorozu, Akira Mita, Masaki Takahashi, Christos Georgoulas, Thomas Bock:
Consistency Verification of Marker-Less Gait Assessment System for Stair Walking. 653-663 - David Casillas-Perez, Javier Macías Guarasa, Marta Marrón Romera, David Fuentes-Jiménez, Alvaro Fernandez-Rincon:
Full Body Gesture Recognition for Human-Machine Interaction in Intelligent Spaces. 664-676 - Daniel Zafra, Javier Medina, Luis Martínez-López, Chris D. Nugent, Macarena Espinilla:
A Web System for Managing and Monitoring Smart Environments. 677-688 - Andrzej Czyzewski, Bozena Kostek:
A Study in Experimental Methods of Human-Computer Communication for Patients After Severe Brain Injuries. 689-703
Pattern Recognition and Machine Learning in the -omics Sciences
- Aleksei Shkurin, Alfredo Vellido:
Random Forests for Quality Control in G-Protein Coupled Receptor Databases. 707-718 - Victor Mocioiu, Sreenath P. Kyathanahally, Carles Arús, Alfredo Vellido, Margarida Julià-Sapé:
Automated Quality Control for Proton Magnetic Resonance Spectroscopy Data Using Convex Non-negative Matrix Factorization. 719-727 - Afshine Amidi, Shervine Amidi, Dimitrios Vlachakis, Nikos Paragios, Evangelia I. Zacharaki:
A Machine Learning Methodology for Enzyme Functional Classification Combining Structural and Protein Sequence Descriptors. 728-738 - Marco Frasca, Simone Bassis:
Gene-Disease Prioritization Through Cost-Sensitive Graph-Based Methodologies. 739-751 - Jan Kralj, Anze Vavpetic, Michel Dumontier, Nada Lavrac:
Network Ranking Assisted Semantic Data Mining. 752-764 - Sarah ElShal, Jaak Simm, Adam Arany, Pooya Zakeri, Jesse Davis, Yves Moreau:
A Comprehensive Comparison of Two MEDLINE Annotators for Disease and Gene Linkage: Sometimes Less is More. 765-778
Resources for Bioinformatics
- Carmen Navarro, Carlos Cano, Marta Cuadros, Antonio Herrera-Merchan, Miguel Molina, Armando Blanco:
A Mechanistic Study of lncRNA Fendrr Regulation of FoxF1 Lung Cancer Tumor Supressor. 781-789 - Mohammed Rais, Abdelmonaime Lachkar:
Evaluation of Disambiguation Strategies on Biomedical Text Categorization. 790-801 - Arif Canakoglu, Stefano Ceri, Marco Masseroli:
Biomolecular Annotation Integration and Querying to Help Unveiling New Biomedical Knowledge. 802-813
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