2. CSB 2003:
Stanford, CA, USA Keynote Addresses
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Richard M. Karp :
The Role of Algorithmic Research in Computational Genomics.
10-12
Invited Speaker
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Philip E. Bourne :
High Performance Computational Biology - Past Progress and Future Promise.
13
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Jehoshua Bruck :
Bridging Paradigm Gaps Between Biology and Engineering.
14
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Jean-Michel Claverie :
Microbial Functional Genomics: Pulling Together a Variety of Approaches and Concepts.
15
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Eric H. Davidson :
The Sea Urchin Endomesoderm Gene Regulatory Network, an Encoded Logic Map for Early Development.
16
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Jun Liu :
BPPS: An Algorithm for Analyzing Protein Sequence Alignments.
28
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Stephen T. C. Wong :
Integrating Bioinformatics Advances into Disease Management Systems to Improve Quality of Care.
30
Genomes to Life
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conf/csb/UberbacherTPJOF03 export record as
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Adam P. Arkin :
Motifs and Modules in Cellular Signal Processing: Applications to Microbial Stress Response Pathways.
33
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Grant Heffelfinger :
An Overview of the Sandia National Laboratories Genomes to Life Project, "Carbon Sequestration in Synechococcus Sp.: From Molecular Machines to Hierarchical Modeling".
34
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Derek Lovley :
Analysis of the Genetic Potential and Gene Expression of Microbial Communities Involved in the In Situ Bioremediation of Uranium and Harvesting ElectricalEnergy from Organic Matter.
35-37
Microarray Data Analysis
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Sven Rahmann :
Fast and Sensitive Probe Selection for DNA Chips Using Jumps in Matching Statistics.
57-64
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Pathways, Networks, and Systems Biology
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Simone Bentolila :
Two operative concepts for the post-genomic era: the "me'moire vive" of the cell and a molecular algebra.
114-123
Biomedical Research and Visualization
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Tolga Can ,
Yuan-Fang Wang :
CTSS: A Robust and Efficient Method for Protein Structure Alignment Based on Local Geometrical and Biological Feature.
169-179
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Werner G. Krebs ,
Philip E. Bourne :
Statistical and Visual Morph Movie Analysis of Crystallographic Mutant Selection Bias in Protein Mutation Resource Data.
180-189
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Data Mining
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Pattern Recognition
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Shoudan Liang :
cWINNOWER Algorithm for Finding Fuzzy DNA Motifs.
260-265
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G. Sampath :
A Block Coding Method that Leads to Significantly Lower Entropy Values for the Proteins and Coding Sections of Haemophilus influenzae.
287-293
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Russell Schwartz :
Haplotype Motifs: An Algorithmic Approach to Locating Evolutionarily Conserved Patterns in Haploid Sequences.
306-315
Sequence Alignment
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conf/csb/TchourbanovQAPN03 export record as
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Bailin Hao ,
Ji Qi :
Prokaryote Phylogeny without Sequence Alignment: From Avoidance Signature to Composition Distance.
375-385
Poster Papers
Data Integration
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conf/csb/ChagoyenKASLCG03 export record as
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Data Mining
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Richard J. Carter :
Riptide: Fast Protein Identification from Mass Spectrometer Data.
398-399
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conf/csb/RazumovskayaOXUVX03
Functional Genomics
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conf/csb/SafranCSRBOYSL03 Marilyn Safran ,
Vered Chalifa-Caspi ,
Orit Shmueli ,
Naomi Rosen ,
Hila Benjamin-Rodrig ,
Ron Ophir ,
Itai Yanai ,
Michael Shmoish ,
Doron Lancet :
The GeneCardsTM Family of Databases: GeneCards, GeneLoc, GeneNote and GeneAnnot.
427-428
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conf/csb/WilczynskiHKSKF03 export record as
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conf/csb/DongBBCCDDEFHHNISTWBC03 Qing Dong ,
Rama Balakrishnan ,
Gail Binkley ,
Karen R. Christie ,
Maria C. Costanzo ,
Kara Dolinski ,
Selina S. Dwight ,
Stacia R. Engel ,
Dianna G. Fisk ,
Jodi E. Hirschman ,
Eurie L. Hong ,
Robert S. Nash ,
Laurie Issel-Tarver ,
Anand Sethuraman ,
Chandra L. Theesfeld ,
Shuai Weng ,
David Botstein ,
J. Michael Cherry :
Gene Function, Metabolic Pathways and Comparative Genomics in Yeast.
437-438
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conf/csb/LivingstonLLHZ03
Genomic Annotation
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Genotyping and SNPs
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Molecular Simulation
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Igor Tsukerman :
New Computational Methods for Electrostatics in Macromolecular Simulation.
458-459
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Chengpeng Bi ,
Craig J. Benham :
The Approximate Algorithm for Analysis of the Strand Separation Transition in Super helical DNA Using Nearest Neighbor Energetics.
460-461
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Phylogeny and Evolution
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Predictive Methods
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Hsiang Chi Huang :
An Evolutionary Approach to Finding Schemas for 3-Class Protein Secondary Structure Prediction.
488-491
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Xue-wen Chen :
Gene Selection for Cancer Classification Using Bootstrapped Genetic Algorithms and Support Vector Machines.
504-505
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Vojislav Stojkovic ,
Grace Steele ,
William Lupton :
Using Easel for Modeling and Simulating the Interactions of Cells in Order to Better Understand the Basics of Biological Processes and to Predict Their Likely Behaviors.
511-516
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conf/csb/KryshtafovychHKF03 export record as
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Sequence Comparison
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Tuan D. Pham :
Alignment-Free Sequence Comparison with Vector Quantization and Hidden Markov Models.
534-535
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conf/csb/GopalakrishnanN03 export record as
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Strings, Graphs, and Algorithms
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Youlian Pan ,
Fazel Famili :
GenericBioMatch: A novel generic pattern match algorithm for biological sequences.
562-563
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Yimin Jing ,
Sami Khuri :
Exact and Heuristic Algorithms for the DNA Fragment Assembly Problem.
581-582
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Structural Biology
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Danny Barash :
Spectral Decomposition of the Laplacian Matrix Applied to RNA Folding Prediction.
602-603
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Luonan Chen :
Multiple Protein Structure Alignment by Deterministic Annealing.
609-610
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Systems Biology
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Text Mining and Ontologies
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Miscellaneous
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data released under the ODC-BY 1.0 license
