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ORCIDDennis E. Shasha
Dennis Elliot Shasha
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- affiliation: New York University, Courant Institute of Mathematical Sciences
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2020 – today
- 2023
[j126]Zhehu Yuan
, Yinqi Sun, Dennis E. Shasha:
Forgetful Forests: Data Structures for Machine Learning on Streaming Data under Concept Drift. Algorithms 16(6): 278 (2023)- [j125]Bingran Shen, Gloria M. Coruzzi, Dennis E. Shasha:
EnsInfer: a simple ensemble approach to network inference outperforms any single method. BMC Bioinform. 24(1): 114 (2023) - [j124]Dennis E. Shasha:
Maximal Cocktails. Commun. ACM 66(1): 112 (2023) - [j123]Dennis E. Shasha:
Cooperation in the Commons. Commun. ACM 66(4) (2023) - [j122]Dennis E. Shasha:
Sampling the Goods. Commun. ACM 66(7) (2023) - [j121]Manos Athanassoulis, Stratos Idreos, Dennis E. Shasha:
Data Structures for Data-Intensive Applications: Tradeoffs and Design Guidelines. Found. Trends Databases 13(1-2): 1-168 (2023) - [j120]Raoni Lourenço, Juliana Freire, Eric Simon, Gabriel Weber, Dennis E. Shasha:
BugDoc. VLDB J. 32(1): 75-101 (2023) - [j119]Raoni Lourenço, Juliana Freire, Eric Simon, Gabriel Weber, Dennis E. Shasha:
Correction to: BugDoc Iterative debugging and explanation of pipeline executions. VLDB J. 32(2): 473 (2023) - [c124]Anh L. Mai, Nikunj Gupta, Azza Abouzied, Dennis E. Shasha:
Planning Multiple Epidemic Interventions with Reinforcement Learning. IJCAI 2023: 6147-6155 - [i20]Anh L. Mai, Nikunj Gupta, Azza Abouzied, Dennis E. Shasha:
Planning Multiple Epidemic Interventions with Reinforcement Learning. CoRR abs/2301.12802 (2023) - 2022
- [j118]Dennis E. Shasha:
Orbit design. Commun. ACM 65(1) (2022) - [j117]Dennis E. Shasha:
Beating the house. Commun. ACM 65(4) (2022) - [j116]Dennis E. Shasha:
Exclusivity probes. Commun. ACM 65(7) (2022) - [j115]Dennis E. Shasha:
Card Nim. Commun. ACM 65(10): 96 (2022) - [j114]João L. M. Pereira, João Casanova, Helena Galhardas, Dennis E. Shasha:
AcX: System, Techniques, and Experiments for Acronym Expansion. Proc. VLDB Endow. 15(11): 2530-2544 (2022) - [i19]Zhehu Yuan, Yinqi Sun, Dennis E. Shasha:
Forgetful Forests: high performance learning data structures for streaming data under concept drift. CoRR abs/2212.07876 (2022) - 2021
- [b13]Manpreet Singh Katari, Sudarshini Tyagi, Dennis E. Shasha:
Statistics is Easy: Case Studies on Real Scientific Datasets. Synthesis Lectures on Mathematics & Statistics, Morgan & Claypool Publishers 2021, pp. 1-74 - [b12]Siddharth Krishna, Nisarg Patel, Dennis E. Shasha, Thomas Wies:
Automated Verification of Concurrent Search Structures. Synthesis Lectures on Computer Science, Morgan & Claypool Publishers 2021, pp. 1-188 - [j113]Lior Galanti, Dennis E. Shasha, Kristin C. Gunsalus:
Pheniqs 2.0: accurate, high-performance Bayesian decoding and confidence estimation for combinatorial barcode indexing. BMC Bioinform. 22(1): 359 (2021) - [j112]Dennis E. Shasha:
Stay in balance. Commun. ACM 64(1): 128 (2021) - [j111]Dennis E. Shasha:
Roulette Angel. Commun. ACM 64(4) (2021) - [j110]Dennis E. Shasha:
String me along. Commun. ACM 64(7): 112 (2021) - [j109]Dennis E. Shasha:
Randomower. Commun. ACM 64(10) (2021) - [j108]Aditya Dhananjay, Kai Zheng, Marco Mezzavilla, Lorenzo Iotti, Dennis E. Shasha, Sundeep Rangan:
Pi-Radio v1: Calibration techniques to enable fully-digital beamforming at 60 GHz. Comput. Networks 196: 108220 (2021) - [j107]Mai Le Xuan Anh, Miro Mannino, Zain Tariq, Azza Abouzied, Dennis E. Shasha:
EpiPolicy: a tool for combating epidemics. XRDS 28(2): 24-29 (2021) - [j106]Oleksandra Levchenko, Boyan Kolev, Djamel Edine Yagoubi, Reza Akbarinia, Florent Masseglia, Themis Palpanas, Dennis E. Shasha, Patrick Valduriez:
BestNeighbor: efficient evaluation of kNN queries on large time series databases. Knowl. Inf. Syst. 63(2): 349-378 (2021) - [j105]Nisarg Patel, Siddharth Krishna, Dennis E. Shasha, Thomas Wies:
Verifying concurrent multicopy search structures. Proc. ACM Program. Lang. 5(OOPSLA): 1-32 (2021) - [j104]Mustafa Anil Koçak, David Ramírez, Elza Erkip, Dennis E. Shasha:
SafePredict: A Meta-Algorithm for Machine Learning That Uses Refusals to Guarantee Correctness. IEEE Trans. Pattern Anal. Mach. Intell. 43(2): 663-678 (2021) - [c123]João L. M. Pereira, Helena Galhardas, Dennis E. Shasha:
Acronym Expander at SDU@AAAI-21: an Acronym Disambiguation Module. SDU@AAAI 2021 - [c122]Zain Tariq, Miro Mannino, Mai Le Xuan Anh, Whitney Bagge, Azza Abouzied, Dennis E. Shasha:
Planning Epidemic Interventions with EpiPolicy. UIST 2021: 894-909 - [i18]Nisarg Patel, Siddharth Krishna, Dennis E. Shasha, Thomas Wies:
Verifying Concurrent Multicopy Search Structures. CoRR abs/2109.05631 (2021) - [i17]Titouan Lorieul, Alexis Joly, Dennis E. Shasha:
Classification Under Ambiguity: When Is Average-K Better Than Top-K? CoRR abs/2112.08851 (2021) - 2020
- [j103]Dennis E. Shasha:
Feedback for foxes. Commun. ACM 63(1) (2020) - [j102]Dennis E. Shasha:
Stopping tyranny. Commun. ACM 63(3) (2020) - [j101]Dennis E. Shasha:
Optimal chimes. Commun. ACM 63(5): 112 (2020) - [j100]Dennis E. Shasha:
Strategic paddling. Commun. ACM 63(7) (2020) - [j99]Dennis E. Shasha:
Privacy-preserving polling. Commun. ACM 63(10) (2020) - [c121]Aditya Dhananjay, Kai Zheng, Jaakko Haarla, Lorenzo Iotti, Marco Mezzavilla, Dennis E. Shasha, Sundeep Rangan:
Calibrating a 4-channel Fully-Digital 60 GHz SDR. WiNTECH@MOBICOM 2020: 40-47 - [c120]Aditya Dhananjay, Kai Zheng, Marco Mezzavilla, Dennis E. Shasha, Sundeep Rangan:
Fully-digital beamforming demonstration with Pi-Radio mmWave SDR platform. MobiHoc 2020: 301-302 - [c119]Siddharth Krishna, Nisarg Patel, Dennis E. Shasha, Thomas Wies:
Verifying concurrent search structure templates. PLDI 2020: 181-196 - [c118]Raoni Lourenço, Juliana Freire, Dennis E. Shasha:
BugDoc: Algorithms to Debug Computational Processes. SIGMOD Conference 2020: 463-478 - [c117]Raoni Lourenço, Juliana Freire, Dennis E. Shasha:
BugDoc: A System for Debugging Computational Pipelines. SIGMOD Conference 2020: 2733-2736 - [i16]Raoni Lourenço, Juliana Freire, Dennis E. Shasha:
Debugging Machine Learning Pipelines. CoRR abs/2002.04640 (2020) - [i15]Giovanni Micale, Vincenzo Bonnici, Alfredo Ferro, Dennis E. Shasha, Rosalba Giugno, Alfredo Pulvirenti:
MultiRI: Fast Subgraph Matching in Labeled Multigraphs. CoRR abs/2003.11546 (2020) - [i14]Raoni Lourenço, Juliana Freire, Dennis E. Shasha:
BugDoc: Algorithms to Debug Computational Processes. CoRR abs/2004.06530 (2020) - [i13]J. Cole Smith, Eric Lin, Dennis E. Shasha:
Robotic Room Traversal using Optical Range Finding. CoRR abs/2004.08368 (2020)
2010 – 2019
- 2019
- [j98]Salvatore Alaimo, Antonio Di Maria, Dennis E. Shasha, Alfredo Ferro, Alfredo Pulvirenti:
TACITuS: transcriptomic data collector, integrator, and selector on big data platform. BMC Bioinform. 20-S(9): 366:1-366:11 (2019) - [j97]Dennis E. Shasha:
Randomized anti-counterfeiting. Commun. ACM 62(1): 120- (2019) - [j96]Dennis E. Shasha:
Fighting for lava. Commun. ACM 62(4): 144 (2019) - [j95]Dennis E. Shasha:
Opioid games. Commun. ACM 62(7): 96- (2019) - [j94]Dennis E. Shasha:
Dust wars. Commun. ACM 62(10): 104- (2019) - [j93]Giovanni Micale, Alfredo Pulvirenti, Alfredo Ferro, Rosalba Giugno, Dennis E. Shasha:
Fast methods for finding significant motifs on labelled multi-relational networks. J. Complex Networks 7(6): 817-837 (2019) - [j92]Christophe Pradal, Sarah Cohen-Boulakia, Patrick Valduriez, Dennis E. Shasha, Konrad Hinsen, Matthew A. Turk:
VersionClimber: Version Upgrades Without Tears. Comput. Sci. Eng. 21(5): 87-93 (2019) - [c116]Shuai Mu, Sebastian Angel, Dennis E. Shasha:
Deferred Runtime Pipelining for contentious multicore software transactions. EuroSys 2019: 40:1-40:16 - [c115]Oleksandra Levchenko, Boyan Kolev, Djamel Edine Yagoubi, Dennis E. Shasha, Themis Palpanas, Patrick Valduriez, Reza Akbarinia, Florent Masseglia:
Distributed Algorithms to Find Similar Time Series. ECML/PKDD (3) 2019: 781-785 - [c114]Raoni Lourenço, Juliana Freire, Dennis E. Shasha:
Debugging Machine Learning Pipelines. DEEM@SIGMOD 2019: 3:1-3:10 - 2018
- [j91]Danilo Dessì, Jacopo Cirrone, Diego Reforgiato Recupero, Dennis E. Shasha:
SuperNoder: a tool to discover over-represented modular structures in networks. BMC Bioinform. 19(1): 318:1-318:12 (2018) - [j90]Dennis E. Shasha:
Polychromatic choreography. Commun. ACM 61(1): 120 (2018) - [j89]Dennis E. Shasha:
Finding October. Commun. ACM 61(4): 96-95 (2018) - [j88]Dennis E. Shasha:
String wars. Commun. ACM 61(7): 104 (2018) - [j87]Dennis E. Shasha:
Bounce blockchain. Commun. ACM 61(9): 104- (2018) - [j86]Giovanni Micale, Rosalba Giugno, Alfredo Ferro, Misael Mongiovì, Dennis E. Shasha, Alfredo Pulvirenti:
Fast analytical methods for finding significant labeled graph motifs. Data Min. Knowl. Discov. 32(2): 504-531 (2018) - [j85]Djamel Edine Yagoubi, Reza Akbarinia, Boyan Kolev, Oleksandra Levchenko, Florent Masseglia, Patrick Valduriez, Dennis E. Shasha:
ParCorr: efficient parallel methods to identify similar time series pairs across sliding windows. Data Min. Knowl. Discov. 32(5): 1481-1507 (2018) - [j84]Siddharth Krishna, Dennis E. Shasha, Thomas Wies:
Go with the flow: compositional abstractions for concurrent data structures. Proc. ACM Program. Lang. 2(POPL): 37:1-37:31 (2018) - [c113]Oleksandra Levchenko, Djamel Edine Yagoubi, Reza Akbarinia, Florent Masseglia, Boyan Kolev, Dennis E. Shasha:
Spark-parSketch: A Massively Distributed Indexing of Time Series Datasets. CIKM 2018: 1951-1954 - [c112]Amir Khatibi, Fabiano Belém, Ana P. Silva, Dennis E. Shasha, Marcos André Gonçalves:
Improving Tourism Prediction Models Using Climate and Social Media Data: A Fine-Grained Approach. ICWSM 2018: 636-639 - [c111]Antonino Aparo, Vincenzo Bonnici, Giovanni Micale, Alfredo Ferro, Dennis E. Shasha, Alfredo Pulvirenti, Rosalba Giugno:
Simple Pattern-only Heuristics Lead to Fast Subgraph Matching Strategies on Very Large Networks. PACBB 2018: 131-138 - [c110]Fábio Porto, Amir Khatibi, João N. Rittmeyer, Eduardo S. Ogasawara, Patrick Valduriez, Dennis E. Shasha:
Constellation Queries over Big Data. SBBD 2018: 85-96 - [c109]Dennis E. Shasha:
Reducing Errors by Refusing to Guess (Occasionally). SBBD 2018: 314 - [c108]Fábio Porto, João N. Rittmeyer, Eduardo S. Ogasawara, Alberto Krone-Martins, Patrick Valduriez, Dennis E. Shasha:
Point pattern search in big data. SSDBM 2018: 21:1-21:12 - [c107]Patrick Valduriez, Marta Mattoso, Reza Akbarinia, Heraldo Borges, José J. Camata, Alvaro L. G. A. Coutinho, Daniel Gaspar, Noel Moreno Lemus, Ji Liu, Hermano Lustosa, Florent Masseglia, Fabrício Nogueira da Silva, Vítor Silva, Renan Souza, Kary A. C. S. Ocaña, Eduardo S. Ogasawara, Daniel de Oliveira, Esther Pacitti, Fábio Porto, Dennis E. Shasha:
Scientific Data Analysis Using Data-Intensive Scalable Computing: The SciDISC Project. LADaS@VLDB 2018: 1-8 - [p9]Misael Mongiovì, Giovanni Micale, Alfredo Ferro, Rosalba Giugno, Alfredo Pulvirenti, Dennis E. Shasha:
gLabTrie: A Data Structure for Motif Discovery with Constraints. Graph Data Management 2018: 71-95 - [r21]Philippe Bonnet, Dennis E. Shasha:
Administration Wizards. Encyclopedia of Database Systems (2nd ed.) 2018 - [r20]Philippe Bonnet, Dennis E. Shasha:
Application-Level Tuning. Encyclopedia of Database Systems (2nd ed.) 2018 - [r19]Philippe Bonnet, Dennis E. Shasha:
Benchmark Frameworks. Encyclopedia of Database Systems (2nd ed.) 2018 - [r18]Philippe Bonnet, Dennis E. Shasha:
Data Generation. Encyclopedia of Database Systems (2nd ed.) 2018 - [r17]Philippe Bonnet, Dennis E. Shasha:
Database Benchmarks. Encyclopedia of Database Systems (2nd ed.) 2018 - [r16]Philippe Bonnet, Dennis E. Shasha:
Index Tuning. Encyclopedia of Database Systems (2nd ed.) 2018 - [r15]Philippe Bonnet, Dennis E. Shasha:
Performance Monitoring Tools. Encyclopedia of Database Systems (2nd ed.) 2018 - [r14]Philippe Bonnet, Dennis E. Shasha:
Physical Layer Tuning. Encyclopedia of Database Systems (2nd ed.) 2018 - [r13]Philippe Bonnet, Dennis E. Shasha:
Schema Tuning. Encyclopedia of Database Systems (2nd ed.) 2018 - [r12]Philippe Bonnet, Dennis E. Shasha:
Tuning Concurrency Control. Encyclopedia of Database Systems (2nd ed.) 2018 - [r11]Dennis E. Shasha:
Transaction Chopping. Encyclopedia of Database Systems (2nd ed.) 2018 - 2017
- [j83]Dennis E. Shasha:
Open field tic-tac-toe. Commun. ACM 60(1): 112 (2017) - [j82]Dennis E. Shasha:
Stacking the deck. Commun. ACM 60(4): 96 (2017) - [j81]Dennis E. Shasha:
Ruby risks. Commun. ACM 60(7): 104 (2017) - [j80]Dennis E. Shasha:
Partitioned peace. Commun. ACM 60(10): 112- (2017) - [j79]Maximilien Servajean, Alexis Joly, Dennis E. Shasha, Julien Champ, Esther Pacitti:
Crowdsourcing Thousands of Specialized Labels: A Bayesian Active Training Approach. IEEE Trans. Multim. 19(6): 1376-1391 (2017) - [c106]Amir Khatibi, Fábio Porto, João Guilherme Nobre Rittmeyer, Eduardo S. Ogasawara, Patrick Valduriez, Dennis E. Shasha:
Pre-processing and Indexing Techniques for Constellation Queries in Big Data. DaWaK 2017: 164-172 - [c105]Djamel Edine Yagoubi, Reza Akbarinia, Florent Masseglia, Dennis E. Shasha:
RadiusSketch: Massively Distributed Indexing of Time Series. DSAA 2017: 262-271 - [i12]Fábio Porto, Amir Khatibi, João Guilherme Nobre Rittmeyer, Eduardo S. Ogasawara, Patrick Valduriez, Dennis E. Shasha:
Constellation Queries over Big Data. CoRR abs/1703.02638 (2017) - [i11]Mustafa Anil Koçak, David Ramírez, Elza Erkip, Dennis E. Shasha:
SafePredict: A Meta-Algorithm for Machine Learning That Uses Refusals to Guarantee Correctness. CoRR abs/1708.06425 (2017) - [i10]Fernando Chirigati, Rebecca Capone, Dennis E. Shasha, Rémi Rampin, Juliana Freire:
A Collaborative Approach to Computational Reproducibility. CoRR abs/1709.01154 (2017) - [i9]Siddharth Krishna, Dennis E. Shasha, Thomas Wies:
Go with the Flow: Compositional Abstractions for Concurrent Data Structures (Extended Version). CoRR abs/1711.03272 (2017) - 2016
- [j78]Dennis E. Shasha:
Upstart Puzzles: Ice Trap. Commun. ACM 59(1): 136 (2016) - [j77]Dennis E. Shasha:
Upstart puzzles. Commun. ACM 59(4): 96 (2016) - [j76]Dennis E. Shasha:
Upstart Puzzles: Chair Games. Commun. ACM 59(7): 128 (2016) - [j75]Dennis E. Shasha:
Find me quickly. Commun. ACM 59(10): 96 (2016) - [j74]Fernando Chirigati, Rebecca Capone, Rémi Rampin, Juliana Freire, Dennis E. Shasha:
A collaborative approach to computational reproducibility. Inf. Syst. 59: 95-97 (2016) - [j73]Rémi Rampin, Fernando Chirigati, Dennis E. Shasha, Juliana Freire, Vicky Steeves:
ReproZip: The Reproducibility Packer. J. Open Source Softw. 1(8): 107 (2016) - [c104]Ashlesh Sharma, Varun Chandrasekaran, Fareeha Amjad, Dennis E. Shasha, Lakshminarayanan Subramanian:
Alphacodes: Usable, Secure Transactions with Untrusted Providers using Human Computable Puzzles. ACM DEV 2016: 5:1-5:10 - [c103]Maximilien Servajean, Alexis Joly, Dennis E. Shasha, Julien Champ, Esther Pacitti:
ThePlantGame: Actively Training Human Annotators for Domain-specific Crowdsourcing. ACM Multimedia 2016: 720-721 - [c102]Swapneel Sheth, Christian Murphy, Kenneth A. Ross, Dennis E. Shasha:
A Course on Programming and Problem Solving. SIGCSE 2016: 323-328 - [c101]Fernando Chirigati, Rémi Rampin, Dennis E. Shasha, Juliana Freire:
ReproZip: Computational Reproducibility With Ease. SIGMOD Conference 2016: 2085-2088 - [c100]Mustafa Anil Koçak, Dennis E. Shasha, Elza Erkip:
Conjugate Conformal Prediction for Online Binary Classification. UAI 2016 - [p8]Eleftherios Soulas, Dennis E. Shasha:
Fast Methods for Statistical Arbitrage. Data Stream Management 2016: 473-497 - 2015
- [j72]Dennis E. Shasha:
Upstart Puzzles: Take Your Seats. Commun. ACM 58(2): 104 (2015) - [j71]Dennis E. Shasha:
Upstart Puzzles: Strategic Friendship. Commun. ACM 58(5): 88 (2015) - [j70]Dennis E. Shasha:
Upstart puzzles. Commun. ACM 58(8): 96 (2015) - [j69]Dennis E. Shasha:
Upstart Puzzles: Auction Triplets. Commun. ACM 58(11): 136 (2015) - [c99]Noah Youngs, Dennis E. Shasha, Richard Bonneau:
Positive-Unlabeled Learning in the Face of Labeling Bias. ICDM Workshops 2015: 639-645 - [c98]Yasuhiro Fujiwara, Dennis E. Shasha:
Quiet: Faster Belief Propagation for Images and Related Applications. IJCAI 2015: 3497-3503 - [i8]Fabio Rinnone, Giovanni Micale, Vincenzo Bonnici, Gary D. Bader, Dennis E. Shasha, Alfredo Ferro, Alfredo Pulvirenti, Rosalba Giugno:
NetMatchStar: an enhanced Cytoscape network querying app. F1000Research 4: 479 (2015) - 2014
- [j68]Dennis E. Shasha:
Upstart Puzzles: Proving without Teaching/Teaching without Proving. Commun. ACM 57(11): 120 (2014) - [j67]Noah Youngs, Duncan Penfold-Brown, Richard Bonneau, Dennis E. Shasha:
Negative Example Selection for Protein Function Prediction: The NoGO Database. PLoS Comput. Biol. 10(6) (2014) - [p7]Philippe Bonnet, Dennis E. Shasha:
Tuning Database Design for High Performance. Computing Handbook, 3rd ed. (2) 2014: 9: 1-15 - [i7]Michele Dolfi, Jan Gukelberger, Andreas Hehn, J. Imriska, K. Pakrouski, Troels F. Rønnow, Matthias Troyer, I. N. Zintchenko, Fernando Seabra Chirigati, Juliana Freire, Dennis E. Shasha:
A model project for reproducible papers: critical temperature for the Ising model on a square lattice. CoRR abs/1401.2000 (2014) - 2013
- [j66]Noah Youngs, Duncan Penfold-Brown, Kevin Drew, Dennis E. Shasha, Richard Bonneau:
Parametric Bayesian priors and better choice of negative examples improve protein function prediction. Bioinform. 29(9): 1190-1198 (2013) - [j65]Vincenzo Bonnici, Rosalba Giugno, Alfredo Pulvirenti, Dennis E. Shasha, Alfredo Ferro:
A subgraph isomorphism algorithm and its application to biochemical data. BMC Bioinform. 14(S-7): S13 (2013) - [j64]Fernando Seabra Chirigati, Matthias Troyer, Dennis E. Shasha, Juliana Freire:
A Computational Reproducibility Benchmark. IEEE Data Eng. Bull. 36(4): 54-59 (2013) - [c97]Wei Cao, Dennis E. Shasha:
AppSleuth: a tool for database tuning at the application level. EDBT 2013: 589-600 - [c96]Wei Cao, Dennis E. Shasha:
Tuning in action. EDBT 2013: 737-740 - [c95]