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Publication search results
found 1,027 matches
- 2019
- Tamim Abdelaal, Thomas Höllt, Vincent van Unen
, Boudewijn P. F. Lelieveldt, Frits Koning
, Marcel J. T. Reinders, Ahmed Mahfouz:
CyTOFmerge: integrating mass cytometry data across multiple panels. Bioinform. 35(20): 4063-4071 (2019) - Mark Abney
, Aisha ElSherbiny:
Kinpute: using identity by descent to improve genotype imputation. Bioinform. 35(21): 4321-4326 (2019) - Zachary B. Abrams, Lin Zhang
, Lynne V. Abruzzo, Nyla A. Heerema, Suli Li, Tom Dillon, Ricky Rodriguez, Kevin R. Coombes
, Philip R. O. Payne
:
CytoGPS: a web-enabled karyotype analysis tool for cytogenetics. Bioinform. 35(24): 5365-5366 (2019) - Bence Ágg
, Andrea Császár
, Máté Szalay-Beko, Dániel V. Veres, Réka Mizsei
, Péter Ferdinandy, Péter Csermely
, István A. Kovács
:
The EntOptLayout Cytoscape plug-in for the efficient visualization of major protein complexes in protein-protein interaction and signalling networks. Bioinform. 35(21): 4490-4492 (2019) - Phaedra Agius
, Heather Geiger, Nicolas Robine
:
SCANVIS: a tool for SCoring, ANnotating and VISualizing splice junctions. Bioinform. 35(22): 4843-4845 (2019) - Alejandro Aguayo-Orozco
, Karine Audouze
, Troels Siggaard
, Robert Barouki, Søren Brunak, Olivier Taboureau
:
sAOP: linking chemical stressors to adverse outcomes pathway networks. Bioinform. 35(24): 5391-5392 (2019) - Longendri Aguilera-Mendoza
, Yovani Marrero-Ponce, Jesus A. Beltran, Roberto Tellez-Ibarra, Hugo A. Guillen-Ramirez
, Carlos A. Brizuela:
Graph-based data integration from bioactive peptide databases of pharmaceutical interest: toward an organized collection enabling visual network analysis. Bioinform. 35(22): 4739-4747 (2019) - Nuraini Aguse, Yuanyuan Qi
, Mohammed El-Kebir:
Summarizing the solution space in tumor phylogeny inference by multiple consensus trees. Bioinform. 35(14): i408-i416 (2019) - Syed Faraz Ahmed
, Ahmed A. Quadeer
, David Morales-Jiménez
, Matthew R. McKay
:
Sub-dominant principal components inform new vaccine targets for HIV Gag. Bioinform. 35(20): 3884-3889 (2019) - Sumon Ahmed
, Magnus Rattray
, Alexis Boukouvalas:
GrandPrix: scaling up the Bayesian GPLVM for single-cell data. Bioinform. 35(1): 47-54 (2019) - Soufiane Ajana, Niyazi Acar, Lionel Bretillon
, Boris P. Hejblum
, Hélène Jacqmin-Gadda, Cécile Delcourt:
Benefits of dimension reduction in penalized regression methods for high-dimensional grouped data: a case study in low sample size. Bioinform. 35(19): 3628-3634 (2019) - Hussein Al-Asadi, Kushal K. Dey, John Novembre, Matthew Stephens:
Inference and visualization of DNA damage patterns using a grade of membership model. Bioinform. 35(8): 1292-1298 (2019) - Mohammed AlQuraishi
:
AlphaFold at CASP13. Bioinform. 35(22): 4862-4865 (2019) - Meshari Alazmi
, Hiroyuki Kuwahara
, Othman Soufan
, Lizhong Ding, Xin Gao:
Systematic selection of chemical fingerprint features improves the Gibbs energy prediction of biochemical reactions. Bioinform. 35(15): 2634-2643 (2019) - Levent Albayrak, Kamil Khanipov
, George Golovko
, Yuriy Fofanov:
Broom: application for non-redundant storage of high throughput sequencing data. Bioinform. 35(1): 143-145 (2019) - Alvaro Alfayate, Carlos Rodriguez Caceres, Helena G. Dos Santos
, Ugo Bastolla
:
Predicted dynamical couplings of protein residues characterize catalysis, transport and allostery. Bioinform. 35(23): 4971-4978 (2019) - Mehdi Ali, Charles Tapley Hoyt, Daniel Domingo-Fernández
, Jens Lehmann
, Hajira Jabeen
:
BioKEEN: a library for learning and evaluating biological knowledge graph embeddings. Bioinform. 35(18): 3538-3540 (2019) - Shahar Alon, Eli Eisenberg, Jasmine Jacob-Hirsch, Gideon Rechavi, Gad Vatine, Reiko Toyama, Steven L. Coon, David C. Klein, Yoav Gothilf:
Corrigendum to: A new cis-acting regulatory element driving gene expression in the zebrafish pineal gland. Bioinform. 35(20): 4206 (2019) - Alsamman M. Alsamman
, Shafik D. Ibrahim, Aladdin Hamwieh:
KASPspoon: an in vitro and in silico PCR analysis tool for high-throughput SNP genotyping. Bioinform. 35(17): 3187-3190 (2019) - Mohammed Alser, Hasan Hassan, Akash Kumar
, Onur Mutlu, Can Alkan
:
Shouji: a fast and efficient pre-alignment filter for sequence alignment. Bioinform. 35(21): 4255-4263 (2019) - Vikram Alva
, Andrei N. Lupas
:
Histones predate the split between bacteria and archaea. Bioinform. 35(14): 2349-2353 (2019) - Roberto Vera Alvarez
, Lorinc Sándor Pongor, Leonardo Mariño-Ramírez
, David Landsman:
TPMCalculator: one-step software to quantify mRNA abundance of genomic features. Bioinform. 35(11): 1960-1962 (2019) - Mohamed Amgad
, Habiba Elfandy
, Hagar Hussein, Lamees A. Atteya, Mai A. T. Elsebaie, Lamia S. Abo Elnasr, Rokia Adel Sakr, Hazem S. E. Salem
, Ahmed F. Ismail, Anas M. Saad
, Joumana Ahmed, Maha A. T. Elsebaie, Mustafijur Rahman, Inas A. Ruhban, Nada M. Elgazar, Yahya Alagha, Mohamed H. Osman
, Ahmed M. Alhusseiny
, Mariam M. Khalaf, Abo-Alela F. Younes, Ali Abdulkarim
, Duaa M. Younes, Ahmed M. Gadallah
, Ahmad M. Elkashash, Salma Y. Fala, Basma M. Zaki, Jonathan D. Beezley, Deepak Roy Chittajallu, David Manthey, David A. Gutman, Lee A. D. Cooper
:
Structured crowdsourcing enables convolutional segmentation of histology images. Bioinform. 35(18): 3461-3467 (2019) - Viren Amin, Didem Agaç, Spencer D. Barnes
, Murat Can Cobanoglu:
Accurate differential analysis of transcription factor activity from gene expression. Bioinform. 35(23): 5018-5029 (2019) - Evgeny Anatskiy, Devon Patrick Ryan, Björn A. Grüning, Laura Arrigoni, Thomas Manke
, Ulrike Bönisch:
Parkour LIMS: high-quality sample preparation in next generation sequencing. Bioinform. 35(8): 1422-1424 (2019) - Tallulah S. Andrews
, Martin Hemberg
:
M3Drop: dropout-based feature selection for scRNASeq. Bioinform. 35(16): 2865-2867 (2019) - Javad Ansarifar, Lizhi Wang:
New algorithms for detecting multi-effect and multi-way epistatic interactions. Bioinform. 35(24): 5078-5085 (2019) - Maciej Antczak
, Marcin Zablocki, Tomasz Zok
, Agnieszka Rybarczyk, Jacek Blazewicz
, Marta Szachniuk
:
RNAvista: a webserver to assess RNA secondary structures with non-canonical base pairs. Bioinform. 35(1): 152-155 (2019) - Iñigo Apaolaza
, Luis Vitores Valcarcel
, Francisco J. Planes:
gMCS: fast computation of genetic minimal cut sets in large networks. Bioinform. 35(3): 535-537 (2019) - David Oliveira Aparício
, Pedro Ribeiro
, Tijana Milenkovic, Fernando Silva
:
Temporal network alignment via GoT-WAVE. Bioinform. 35(18): 3527-3529 (2019)
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