default search action
Mohammed Alser
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2024
- [j15]Can Firtina, Kamlesh R. Pillai, Gurpreet S. Kalsi, Bharathwaj Suresh, Damla Senol Cali, Jeremie S. Kim, Taha Shahroodi, Meryem Banu Cavlak, Joël Lindegger, Mohammed Alser, Juan Gómez-Luna, Sreenivas Subramoney, Onur Mutlu:
ApHMM: Accelerating Profile Hidden Markov Models for Fast and Energy-efficient Genome Analysis. ACM Trans. Archit. Code Optim. 21(1): 19:1-19:29 (2024) - [j14]Zülal Bingöl, Mohammed Alser, Onur Mutlu, Ozcan Ozturk, Can Alkan:
GateKeeper-GPU: Fast and Accurate Pre-Alignment Filtering in Short Read Mapping. IEEE Trans. Computers 73(5): 1206-1218 (2024) - [c19]Julian Pavon, Iván Vargas Valdivieso, Carlos Rojas, César Hernández, Mehmet Aslan, Roger Figueras, Yichao Yuan, Joël Lindegger, Mohammed Alser, Francesc Moll, Santiago Marco-Sola, Oguz Ergin, Nishil Talati, Onur Mutlu, Osman S. Unsal, Mateo Valero, Adrián Cristal:
QUETZAL: Vector Acceleration Framework for Modern Genome Sequence Analysis Algorithms. ISCA 2024: 597-612 - [c18]Nika Mansouri-Ghiasi, Mohammad Sadrosadati, Harun Mustafa, Arvid Gollwitzer, Can Firtina, Julien Eudine, Haiyu Mao, Joël Lindegger, Meryem Banu Cavlak, Mohammed Alser, Jisung Park, Onur Mutlu:
MegIS: High-Performance, Energy-Efficient, and Low-Cost Metagenomic Analysis with In-Storage Processing. ISCA 2024: 660-677 - [i40]Nika Mansouri-Ghiasi, Mohammad Sadrosadati, Harun Mustafa, Arvid Gollwitzer, Can Firtina, Julien Eudine, Haiyu Mao, Joël Lindegger, Meryem Banu Cavlak, Mohammed Alser, Jisung Park, Onur Mutlu:
MegIS: High-Performance, Energy-Efficient, and Low-Cost Metagenomic Analysis with In-Storage Processing. CoRR abs/2406.19113 (2024) - 2023
- [j13]Safaa Diab, Amir Nassereldine, Mohammed Alser, Juan Gómez-Luna, Onur Mutlu, Izzat El Hajj:
A framework for high-throughput sequence alignment using real processing-in-memory systems. Bioinform. 39(5) (2023) - [j12]Joël Lindegger, Damla Senol Cali, Mohammed Alser, Juan Gómez-Luna, Nika Mansouri-Ghiasi, Onur Mutlu:
Scrooge: a fast and memory-frugal genomic sequence aligner for CPUs, GPUs, and ASICs. Bioinform. 39(5) (2023) - [i39]Julien Eudine, Mohammed Alser, Gagandeep Singh, Can Alkan, Onur Mutlu:
GateSeeder: Near-memory CPU-FPGA Acceleration of Short and Long Read Mapping. CoRR abs/2309.17063 (2023) - [i38]Maximilian-David Rumpf, Mohammed Alser, Arvid E. Gollwitzer, Joël Lindegger, Nour Almadhoun, Can Firtina, Serghei Mangul, Onur Mutlu:
SequenceLab: A Comprehensive Benchmark of Computational Methods for Comparing Genomic Sequences. CoRR abs/2310.16908 (2023) - [i37]Arvid E. Gollwitzer, Mohammed Alser, Joel Bergtholdt, Joël Lindegger, Maximilian-David Rumpf, Can Firtina, Serghei Mangul, Onur Mutlu:
MetaFast: Enabling Fast Metagenomic Classification via Seed Counting and Edit Distance Approximation. CoRR abs/2311.02029 (2023) - [i36]Nika Mansouri-Ghiasi, Mohammad Sadrosadati, Harun Mustafa, Arvid Gollwitzer, Can Firtina, Julien Eudine, Haiyu Mao, Joël Lindegger, Meryem Banu Cavlak, Mohammed Alser, Jisung Park, Onur Mutlu:
MetaStore: High-Performance Metagenomic Analysis via In-Storage Computing. CoRR abs/2311.12527 (2023) - 2022
- [j11]Taha Shahroodi, Mahdi Zahedi, Can Firtina, Mohammed Alser, Stephan Wong, Onur Mutlu, Said Hamdioui:
Demeter: A Fast and Energy-Efficient Food Profiler Using Hyperdimensional Computing in Memory. IEEE Access 10: 82493-82510 (2022) - [c17]Nika Mansouri-Ghiasi, Jisung Park, Harun Mustafa, Jeremie S. Kim, Ataberk Olgun, Arvid Gollwitzer, Damla Senol Cali, Can Firtina, Haiyu Mao, Nour Almadhoun Alserr, Rachata Ausavarungnirun, Nandita Vijaykumar, Mohammed Alser, Onur Mutlu:
GenStore: a high-performance in-storage processing system for genome sequence analysis. ASPLOS 2022: 635-654 - [c16]Joël Lindegger, Damla Senol Cali, Mohammed Alser, Juan Gómez-Luna, Onur Mutlu:
Algorithmic Improvement and GPU Acceleration of the GenASM Algorithm. IPDPS Workshops 2022: 162 - [c15]Safaa Diab, Amir Nassereldine, Mohammed Alser, Juan Gómez-Luna, Onur Mutlu, Izzat El Hajj:
High-throughput Pairwise Alignment with the Wavefront Algorithm using Processing-in-Memory. IPDPS Workshops 2022: 163 - [c14]Damla Senol Cali, Konstantinos Kanellopoulos, Joël Lindegger, Zülal Bingöl, Gurpreet S. Kalsi, Ziyi Zuo, Can Firtina, Meryem Banu Cavlak, Jeremie S. Kim, Nika Mansouri-Ghiasi, Gagandeep Singh, Juan Gómez-Luna, Nour Almadhoun Alserr, Mohammed Alser, Sreenivas Subramoney, Can Alkan, Saugata Ghose, Onur Mutlu:
SeGraM: a universal hardware accelerator for genomic sequence-to-graph and sequence-to-sequence mapping. ISCA 2022: 638-655 - [c13]Ivan Fernandez, Ricardo Quislant, Christina Giannoula, Mohammed Alser, Juan Gómez-Luna, Eladio Gutiérrez, Oscar G. Plata, Onur Mutlu:
Exploiting Near-Data Processing to Accelerate Time Series Analysis. ISVLSI 2022: 279-282 - [c12]Nika Mansouri-Ghiasi, Jisung Park, Harun Mustafa, Jeremie S. Kim, Ataberk Olgun, Arvid Gollwitzer, Damla Senol Cali, Can Firtina, Haiyu Mao, Nour Almadhoun Alserr, Rachata Ausavarungnirun, Nandita Vijaykumar, Mohammed Alser, Onur Mutlu:
GenStore: In-Storage Filtering of Genomic Data for High-Performance and Energy-Efficient Genome Analysis. ISVLSI 2022: 283-287 - [c11]Haiyu Mao, Mohammed Alser, Mohammad Sadrosadati, Can Firtina, Akanksha Baranwal, Damla Senol Cali, Aditya Manglik, Nour Almadhoun Alserr, Onur Mutlu:
GenPIP: In-Memory Acceleration of Genome Analysis via Tight Integration of Basecalling and Read Mapping. MICRO 2022: 710-726 - [c10]João Dinis Ferreira, Gabriel Falcão, Juan Gómez-Luna, Mohammed Alser, Lois Orosa, Mohammad Sadrosadati, Jeremie S. Kim, Geraldo F. Oliveira, Taha Shahroodi, Anant Nori, Onur Mutlu:
pLUTo: Enabling Massively Parallel Computation in DRAM via Lookup Tables. MICRO 2022: 900-919 - [d1]João Dinis Ferreira, Gabriel Falcão, Juan Gómez-Luna, Mohammed Alser, Lois Orosa, Mohammad Sadrosadati, Jeremie S. Kim, Geraldo F. Oliveira, Taha Shahroodi, Anant Nori, Onur Mutlu:
pLUTo: Enabling Massively Parallel Computation In DRAM via Lookup Tables. Zenodo, 2022 - [i35]Nika Mansouri-Ghiasi, Jisung Park, Harun Mustafa, Jeremie S. Kim, Ataberk Olgun, Arvid Gollwitzer, Damla Senol Cali, Can Firtina, Haiyu Mao, Nour Almadhoun Alserr, Rachata Ausavarungnirun, Nandita Vijaykumar, Mohammed Alser, Onur Mutlu:
GenStore: A High-Performance and Energy-Efficient In-Storage Computing System for Genome Sequence Analysis. CoRR abs/2202.10400 (2022) - [i34]Joël Lindegger, Damla Senol Cali, Mohammed Alser, Juan Gómez-Luna, Onur Mutlu:
Algorithmic Improvement and GPU Acceleration of the GenASM Algorithm. CoRR abs/2203.15561 (2022) - [i33]Mohammed Alser, Sharon Waymost, Ram Ayyala, Brendan Lawlor, Richard J. Abdill, Neha Rajkumar, Nathan LaPierre, Jaqueline J. Brito, Andre M. Ribeiro-dos-Santos, Can Firtina, Nour Almadhoun, Varuni Sarwal, Eleazar Eskin, Qiyang Hu, Derek Strong, Byoung-Do Kim, Malak S. Abedalthagafi, Onur Mutlu, Serghei Mangul:
Packaging, containerization, and virtualization of computational omics methods: Advances, challenges, and opportunities. CoRR abs/2203.16261 (2022) - [i32]Safaa Diab, Amir Nassereldine, Mohammed Alser, Juan Gómez-Luna, Onur Mutlu, Izzat El Hajj:
High-throughput Pairwise Alignment with the Wavefront Algorithm using Processing-in-Memory. CoRR abs/2204.02085 (2022) - [i31]Damla Senol Cali, Konstantinos Kanellopoulos, Joël Lindegger, Zülal Bingöl, Gurpreet S. Kalsi, Ziyi Zuo, Can Firtina, Meryem Banu Cavlak, Jeremie S. Kim, Nika Mansouri-Ghiasi, Gagandeep Singh, Juan Gómez-Luna, Nour Almadhoun Alserr, Mohammed Alser, Sreenivas Subramoney, Can Alkan, Saugata Ghose, Onur Mutlu:
SeGraM: A Universal Hardware Accelerator for Genomic Sequence-to-Graph and Sequence-to-Sequence Mapping. CoRR abs/2205.05883 (2022) - [i30]Mohammed Alser, Joël Lindegger, Can Firtina, Nour Almadhoun, Haiyu Mao, Gagandeep Singh, Juan Gómez-Luna, Onur Mutlu:
Going From Molecules to Genomic Variations to Scientific Discovery: Intelligent Algorithms and Architectures for Intelligent Genome Analysis. CoRR abs/2205.07957 (2022) - [i29]Ivan Fernandez, Ricardo Quislant, Christina Giannoula, Mohammed Alser, Juan Gómez-Luna, Eladio Gutiérrez, Oscar G. Plata, Onur Mutlu:
Exploiting Near-Data Processing to Accelerate Time Series Analysis. CoRR abs/2206.00938 (2022) - [i28]Taha Shahroodi, Mahdi Zahedi, Can Firtina, Mohammed Alser, Stephan Wong, Onur Mutlu, Said Hamdioui:
Demeter: A Fast and Energy-Efficient Food Profiler using Hyperdimensional Computing in Memory. CoRR abs/2206.01932 (2022) - [i27]Mohammed Alser, Jeremie S. Kim, Nour Almadhoun Alserr, Stefan W. Tell, Onur Mutlu:
COVIDHunter: COVID-19 pandemic wave prediction and mitigation via seasonality-aware modeling. CoRR abs/2206.06692 (2022) - [i26]Can Firtina, Kamlesh R. Pillai, Gurpreet S. Kalsi, Bharathwaj Suresh, Damla Senol Cali, Jeremie S. Kim, Taha Shahroodi, Meryem Banu Cavlak, Joël Lindegger, Mohammed Alser, Juan Gómez-Luna, Sreenivas Subramoney, Onur Mutlu:
ApHMM: Accelerating Profile Hidden Markov Models for Fast and Energy-Efficient Genome Analysis. CoRR abs/2207.09765 (2022) - [i25]Safaa Diab, Amir Nassereldine, Mohammed Alser, Juan Gómez-Luna, Onur Mutlu, Izzat El Hajj:
A Framework for High-throughput Sequence Alignment using Real Processing-in-Memory Systems. CoRR abs/2208.01243 (2022) - [i24]Joël Lindegger, Damla Senol Cali, Mohammed Alser, Juan Gómez-Luna, Nika Mansouri-Ghiasi, Onur Mutlu:
Scrooge: A Fast and Memory-Frugal Genomic Sequence Aligner for CPUs, GPUs, and ASICs. CoRR abs/2208.09985 (2022) - [i23]Haiyu Mao, Mohammed Alser, Mohammad Sadrosadati, Can Firtina, Akanksha Baranwal, Damla Senol Cali, Aditya Manglik, Nour Almadhoun Alserr, Onur Mutlu:
GenPIP: In-Memory Acceleration of Genome Analysis via Tight Integration of Basecalling and Read Mapping. CoRR abs/2209.08600 (2022) - [i22]Gagandeep Singh, Mohammed Alser, Alireza Khodamoradi, Kristof Denolf, Can Firtina, Meryem Banu Cavlak, Henk Corporaal, Onur Mutlu:
A Framework for Designing Efficient Deep Learning-Based Genomic Basecallers. CoRR abs/2211.03079 (2022) - [i21]Mohammed Alser, Julien Eudine, Onur Mutlu:
Taming Large-Scale Genomic Analyses via Sparsified Genomics. CoRR abs/2211.08157 (2022) - [i20]Meryem Banu Cavlak, Gagandeep Singh, Mohammed Alser, Can Firtina, Joël Lindegger, Mohammad Sadrosadati, Nika Mansouri-Ghiasi, Can Alkan, Onur Mutlu:
TargetCall: Eliminating the Wasted Computation in Basecalling via Pre-Basecalling Filtering. CoRR abs/2212.04953 (2022) - 2021
- [j10]Mohammed Alser, Taha Shahroodi, Juan Gómez-Luna, Can Alkan, Onur Mutlu:
SneakySnake: a fast and accurate universal genome pre-alignment filter for CPUs, GPUs and FPGAs. Bioinform. 36(22-23): 5282-5290 (2021) - [j9]Gagandeep Singh, Mohammed Alser, Damla Senol Cali, Dionysios Diamantopoulos, Juan Gómez-Luna, Henk Corporaal, Onur Mutlu:
FPGA-Based Near-Memory Acceleration of Modern Data-Intensive Applications. IEEE Micro 41(4): 39-48 (2021) - [c9]Nastaran Hajinazar, Geraldo F. Oliveira, Sven Gregorio, João Dinis Ferreira, Nika Mansouri-Ghiasi, Minesh Patel, Mohammed Alser, Saugata Ghose, Juan Gómez-Luna, Onur Mutlu:
SIMDRAM: a framework for bit-serial SIMD processing using DRAM. ASPLOS 2021: 329-345 - [c8]Zülal Bingöl, Mohammed Alser, Onur Mutlu, Ozcan Ozturk, Can Alkan:
GateKeeper-GPU: Fast and Accurate Pre-Alignment Filtering in Short Read Mapping. IPDPS Workshops 2021: 209 - [c7]Jawad Haj-Yahya, Lois Orosa, Jeremie S. Kim, Juan Gómez-Luna, Abdullah Giray Yaglikçi, Mohammed Alser, Ivan Puddu, Onur Mutlu:
IChannels: Exploiting Current Management Mechanisms to Create Covert Channels in Modern Processors. ISCA 2021: 985-998 - [i19]Mohammed Alser, Jeremie S. Kim, Nour Almadhoun Alserr, Stefan W. Tell, Onur Mutlu:
COVIDHunter: An Accurate, Flexible, and Environment-Aware Open-Source COVID-19 Outbreak Simulation Model. CoRR abs/2102.03667 (2021) - [i18]Zülal Bingöl, Mohammed Alser, Onur Mutlu, Ozcan Ozturk, Can Alkan:
GateKeeper-GPU: Fast and Accurate Pre-Alignment Filtering in Short Read Mapping. CoRR abs/2103.14978 (2021) - [i17]João Dinis Ferreira, Gabriel Falcão, Juan Gómez-Luna, Mohammed Alser, Lois Orosa, Mohammad Sadrosadati, Jeremie S. Kim, Geraldo F. Oliveira, Taha Shahroodi, Anant Nori, Onur Mutlu:
pLUTo: In-DRAM Lookup Tables to Enable Massively Parallel General-Purpose Computation. CoRR abs/2104.07699 (2021) - [i16]Nastaran Hajinazar, Geraldo F. Oliveira, Sven Gregorio, João Dinis Ferreira, Nika Mansouri-Ghiasi, Minesh Patel, Mohammed Alser, Saugata Ghose, Juan Gómez-Luna, Onur Mutlu:
SIMDRAM: An End-to-End Framework for Bit-Serial SIMD Computing in DRAM. CoRR abs/2105.12839 (2021) - [i15]Jawad Haj-Yahya, Jeremie S. Kim, Abdullah Giray Yaglikçi, Ivan Puddu, Lois Orosa, Juan Gómez-Luna, Mohammed Alser, Onur Mutlu:
IChannels: Exploiting Current Management Mechanisms to Create Covert Channels in Modern Processors. CoRR abs/2106.05050 (2021) - [i14]Gagandeep Singh, Mohammed Alser, Damla Senol Cali, Dionysios Diamantopoulos, Juan Gómez-Luna, Henk Corporaal, Onur Mutlu:
FPGA-based Near-Memory Acceleration of Modern Data-Intensive Applications. CoRR abs/2106.06433 (2021) - 2020
- [j8]Can Firtina, Jeremie S. Kim, Mohammed Alser, Damla Senol Cali, A. Ercüment Çiçek, Can Alkan, Onur Mutlu:
Apollo: a sequencing-technology-independent, scalable and accurate assembly polishing algorithm. Bioinform. 36(12): 3669-3679 (2020) - [j7]Mohammed Alser, Zülal Bingöl, Damla Senol Cali, Jeremie S. Kim, Saugata Ghose, Can Alkan, Onur Mutlu:
Accelerating Genome Analysis: A Primer on an Ongoing Journey. IEEE Micro 40(5): 65-75 (2020) - [c6]Jawad Haj-Yahya, Yanos Sazeides, Mohammed Alser, Efraim Rotem, Onur Mutlu:
Techniques for Reducing the Connected-Standby Energy Consumption of Mobile Devices. HPCA 2020: 623-636 - [c5]Ivan Fernandez, Ricardo Quislant, Eladio Gutiérrez, Oscar G. Plata, Christina Giannoula, Mohammed Alser, Juan Gómez-Luna, Onur Mutlu:
NATSA: A Near-Data Processing Accelerator for Time Series Analysis. ICCD 2020: 120-129 - [c4]Jawad Haj-Yahya, Mohammed Alser, Jeremie S. Kim, Abdullah Giray Yaglikçi, Nandita Vijaykumar, Efraim Rotem, Onur Mutlu:
SysScale: Exploiting Multi-domain Dynamic Voltage and Frequency Scaling for Energy Efficient Mobile Processors. ISCA 2020: 227-240 - [c3]Damla Senol Cali, Gurpreet S. Kalsi, Zülal Bingöl, Can Firtina, Lavanya Subramanian, Jeremie S. Kim, Rachata Ausavarungnirun, Mohammed Alser, Juan Gómez-Luna, Amirali Boroumand, Anant Nori, Allison Scibisz, Sreenivas Subramoney, Can Alkan, Saugata Ghose, Onur Mutlu:
GenASM: A High-Performance, Low-Power Approximate String Matching Acceleration Framework for Genome Sequence Analysis. MICRO 2020: 951-966 - [c2]Jawad Haj-Yahya, Mohammed Alser, Jeremie S. Kim, Lois Orosa, Efraim Rotem, Avi Mendelson, Anupam Chattopadhyay, Onur Mutlu:
FlexWatts: A Power- and Workload-Aware Hybrid Power Delivery Network for Energy-Efficient Microprocessors. MICRO 2020: 1051-1066 - [i13]Jawad Haj-Yahya, Mohammed Alser, Jeremie S. Kim, Abdullah Giray Yaglikçi, Nandita Vijaykumar, Efraim Rotem, Onur Mutlu:
SysScale: Exploiting Multi-domain Dynamic Voltage and Frequency Scaling for Energy Efficient Mobile Processors. CoRR abs/2005.07613 (2020) - [i12]Mohammed Alser, Zülal Bingöl, Damla Senol Cali, Jeremie S. Kim, Saugata Ghose, Can Alkan, Onur Mutlu:
Accelerating Genome Analysis: A Primer on an Ongoing Journey. CoRR abs/2008.00961 (2020) - [i11]Damla Senol Cali, Gurpreet S. Kalsi, Zülal Bingöl, Can Firtina, Lavanya Subramanian, Jeremie S. Kim, Rachata Ausavarungnirun, Mohammed Alser, Juan Gómez-Luna, Amirali Boroumand, Anant Nori, Allison Scibisz, Sreenivas Subramoney, Can Alkan, Saugata Ghose, Onur Mutlu:
GenASM: A High-Performance, Low-Power Approximate String Matching Acceleration Framework for Genome Sequence Analysis. CoRR abs/2009.07692 (2020) - [i10]Jawad Haj-Yahya, Mohammed Alser, Jeremie S. Kim, Lois Orosa, Efraim Rotem, Avi Mendelson, Anupam Chattopadhyay, Onur Mutlu:
FlexWatts: A Power- and Workload-Aware Hybrid Power Delivery Network for Energy-Efficient Microprocessors. CoRR abs/2009.09094 (2020) - [i9]Ivan Fernandez, Ricardo Quislant, Christina Giannoula, Mohammed Alser, Juan Gómez-Luna, Eladio Gutiérrez, Oscar G. Plata, Onur Mutlu:
NATSA: A Near-Data Processing Accelerator for Time Series Analysis. CoRR abs/2010.02079 (2020) - [i8]Nastaran Hajinazar, Geraldo F. Oliveira, Sven Gregorio, João Dinis Ferreira, Nika Mansouri-Ghiasi, Minesh Patel, Mohammed Alser, Saugata Ghose, Juan Gómez-Luna, Onur Mutlu:
SIMDRAM: A Framework for Bit-Serial SIMD Processing Using DRAM. CoRR abs/2012.11890 (2020)
2010 – 2019
- 2019
- [j6]Mohammed Alser, Hasan Hassan, Akash Kumar, Onur Mutlu, Can Alkan:
Shouji: a fast and efficient pre-alignment filter for sequence alignment. Bioinform. 35(21): 4255-4263 (2019) - [i7]Can Firtina, Jeremie S. Kim, Mohammed Alser, Damla Senol Cali, A. Ercüment Çiçek, Can Alkan, Onur Mutlu:
Apollo: A Sequencing-Technology-Independent, Scalable, and Accurate Assembly Polishing Algorithm. CoRR abs/1902.04341 (2019) - [i6]Mohammed H. K. Alser:
Accelerating the Understanding of Life's Code Through Better Algorithms and Hardware Design. CoRR abs/1910.03936 (2019) - [i5]Mohammed Alser, Taha Shahroodi, Juan Gómez-Luna, Can Alkan, Onur Mutlu:
SneakySnake: A Fast and Accurate Universal Genome Pre-Alignment Filter for CPUs, GPUs, and FPGAs. CoRR abs/1910.09020 (2019) - [i4]Jeremie S. Kim, Can Firtina, Meryem Banu Cavlak, Damla Senol Cali, Mohammed Alser, Nastaran Hajinazar, Can Alkan, Onur Mutlu:
AirLift: A Fast and Comprehensive Technique for Remapping Alignments between Reference Genomes. CoRR abs/1912.08735 (2019) - 2018
- [b1]Mohammed H. K. Alser:
Accelerating the understanding of life\'s code through better algorithms and hardware design (Yaşamın kodunu anlamayı daha iyi algoritmalar ve donanım tasarımlarıyla hızlandırmak). İhsan Doğramacı Bilkent University, Turkey, 2018 - [j5]Jeremie S. Kim, Damla Senol Cali, Hongyi Xin, Donghyuk Lee, Saugata Ghose, Mohammed Alser, Hasan Hassan, Oguz Ergin, Can Alkan, Onur Mutlu:
GRIM-Filter: Fast seed location filtering in DNA read mapping using processing-in-memory technologies. BMC Genom. 19(S2) (2018) - [i3]Mohammed Alser, Hasan Hassan, Akash Kumar, Onur Mutlu, Can Alkan:
SLIDER: Fast and Efficient Computation of Banded Sequence Alignment. CoRR abs/1809.07858 (2018) - 2017
- [j4]Mohammed Alser, Hasan Hassan, Hongyi Xin, Oguz Ergin, Onur Mutlu, Can Alkan:
GateKeeper: a new hardware architecture for accelerating pre-alignment in DNA short read mapping. Bioinform. 33(21): 3355-3363 (2017) - [i2]Jeremie S. Kim, Damla Senol Cali, Hongyi Xin, Donghyuk Lee, Saugata Ghose, Mohammed Alser, Hasan Hassan, Oguz Ergin, Can Alkan, Onur Mutlu:
GRIM-Filter: Fast Seed Location Filtering in DNA Read Mapping Using Processing-in-Memory Technologies. CoRR abs/1711.01177 (2017) - 2016
- [i1]Mohammed Alser, Hasan Hassan, Hongyi Xin, Oguz Ergin, Onur Mutlu, Can Alkan:
GateKeeper: Enabling Fast Pre-Alignment in DNA Short Read Mapping with a New Streaming Accelerator Architecture. CoRR abs/1604.01789 (2016) - 2015
- [c1]Mohammed Alser, Nour Almadhoun, Azita Nouri, Can Alkan, Erman Ayday:
Can you Really Anonymize the Donors of Genomic Data in Today's Digital World? DPM/QASA@ESORICS 2015: 237-244 - 2013
- [j3]Maher Assaad, Mohammed H. Alser, Amine Bermak:
Design and Characterization of Low Power and Low Noise Truly All-Digital Clock and Data Recovery Circuit for SERDES Devices. J. Low Power Electron. 9(1): 63-72 (2013) - 2012
- [j2]Maher Assaad, Mohammed H. Alser:
Design of an All-Digital Synchronized Frequency Multiplier Based on a Dual-Loop (D/FLL) Architecture. VLSI Design 2012: 546212:1-546212:7 (2012) - 2011
- [j1]Maher Assaad, Mohammed H. Alser:
An FPGA-based design and implementation of an all-digital serializer for inter module communication in SoC. IEICE Electron. Express 8(23): 2017-2023 (2011)
Coauthor Index
aka: Nour Almadhoun Alserr
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from , , and to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from .
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2024-10-07 22:21 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint