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Publication search results
found 746 matches
- 2014
- Federico Agostini, Davide Cirillo, Carmen Maria Livi, Riccardo Delli Ponti, Gian Gaetano Tartaglia:
ccSOL omics: a webserver for solubility prediction of endogenous and heterologous expression in Escherichia coli. Bioinform. 30(20): 2975-2977 (2014) - Sanjay Agravat, Joel H. Saltz, Richard D. Cummings, David F. Smith:
GlycoPattern: a web platform for glycan array mining. Bioinform. 30(23): 3417-3418 (2014) - Raúl Aguirre-Gamboa, Victor Trevino:
SurvMicro: assessment of miRNA-based prognostic signatures for cancer clinical outcomes by multivariate survival analysis. Bioinform. 30(11): 1630-1632 (2014) - TaeJin Ahn, Eunjin Lee, Nam Huh, Taesung Park:
Personalized identification of altered pathways in cancer using accumulated normal tissue data. Bioinform. 30(17): 422-429 (2014) - Tarmo Äijö, Vincent Butty, Zhi Jane Chen, Verna Salo, Subhash Tripathi, Christopher B. Burge, Riitta Lahesmaa, Harri Lähdesmäki:
Methods for time series analysis of RNA-seq data with application to human Th17 cell differentiation. Bioinform. 30(12): 113-120 (2014) - Kemal Akman, Thomas Haaf, Silvia Gravina, Jan Vijg, Achim Tresch:
Genome-wide quantitative analysis of DNA methylation from bisulfite sequencing data. Bioinform. 30(13): 1933-1934 (2014) - Bülent Arman Aksoy, Emek Demir, Özgün Babur, Weiqing Wang, Xiaohong Jing, Nikolaus Schultz, Chris Sander:
Prediction of individualized therapeutic vulnerabilities in cancer from genomic profiles. Bioinform. 30(14): 2051-2059 (2014) - Rodrigo Aldecoa, Ignacio Marín:
SurpriseMe: an integrated tool for network community structure characterization using Surprise maximization. Bioinform. 30(7): 1041-1042 (2014) - Waqar Ali, Tiago Rito, Gesine Reinert, Fengzhu Sun, Charlotte M. Deane:
Alignment-free protein interaction network comparison. Bioinform. 30(17): 430-437 (2014) - Ferhat Alkan, Cesim Erten:
BEAMS: backbone extraction and merge strategy for the global many-to-many alignment of multiple PPI networks. Bioinform. 30(4): 531-539 (2014) - Omer S. Alkhnbashi, Fabrizio Costa, Shiraz A. Shah, Roger A. Garrett, Sita J. Saunders, Rolf Backofen:
CRISPRstrand: predicting repeat orientations to determine the crRNA-encoding strand at CRISPR loci. Bioinform. 30(17): 489-496 (2014) - Manuel Allhoff, Kristin Seré, Heike Chauvistré, Qiong Lin, Martin Zenke, Ivan G. Costa:
Detecting differential peaks in ChIP-seq signals with ODIN. Bioinform. 30(24): 3467-3475 (2014) - Daniel Alonso-Alemany, Aurélien Barré, Stefano Beretta, Paola Bonizzoni, Macha Nikolski, Gabriel Valiente:
Further Steps in TANGO: improved taxonomic assignment in metagenomics. Bioinform. 30(1): 17-23 (2014) - Jérôme Ambroise, Yann Deccache, Leonid Irenge, Encho Savov, Annie Robert, Jean-Luc Gala:
Amplicon identification using SparsE representation of multiplex PYROsequencing signal (AdvISER-M-PYRO): application to bacterial resistance genotyping. Bioinform. 30(24): 3590-3597 (2014) - Eric C. Anderson, Thomas C. Ng:
Comment on 'Bayesian parentage analysis with systematic accountability of genotyping error, missing data and false matching'. Bioinform. 30(5): 743-745 (2014) - Noemi Andor, Julie V. Harness, Sabine Müller, Hans-Werner Mewes, Claudia Petritsch:
EXPANDS: expanding ploidy and allele frequency on nested subpopulations. Bioinform. 30(1): 50-60 (2014) - Florent E. Angly, Christopher J. Fields, Gene W. Tyson:
The Bio-Community Perl toolkit for microbial ecology. Bioinform. 30(13): 1926-1927 (2014) - Seyed Yahya Anvar, Kristiaan J. van der Gaag, Jaap W. F. van der Heijden, Marcel H. A. M. Veltrop, Rolf H. A. M. Vossen, Rick H. de Leeuw, Cor Breukel, Henk P. J. Buermans, J. Sjef Verbeek, Peter de Knijff, Johan T. den Dunnen, Jeroen F. J. Laros:
TSSV: a tool for characterization of complex allelic variants in pure and mixed genomes. Bioinform. 30(12): 1651-1659 (2014) - Ya'ara Arkin, Elior Rahmani, Marcus E. Kleber, Reijo Laaksonen, Winfried März, Eran Halperin:
EPIQ - efficient detection of SNP-SNP epistatic interactions for quantitative traits. Bioinform. 30(12): 19-25 (2014) - Javier Arnedo, Rocío Romero-Záliz, Igor Zwir, Coral del Val:
A multiobjective method for robust identification of bacterial small non-coding RNAs. Bioinform. 30(20): 2875-2882 (2014) - Martin J. Aryee, Andrew E. Jaffe, Héctor Corrada Bravo, Christine Ladd-Acosta, Andrew P. Feinberg, Kasper D. Hansen, Rafael A. Irizarry:
Minfi: a flexible and comprehensive Bioconductor package for the analysis of Infinium DNA methylation microarrays. Bioinform. 30(10): 1363-1369 (2014) - Samuel A. Assefa, Mark D. Preston, Susana G. Campino, Harold Ocholla, Colin J. Sutherland, Taane G. Clark:
estMOI: estimating multiplicity of infection using parasite deep sequencing data. Bioinform. 30(9): 1292-1294 (2014) - Nir Atias, Michal Gershenzon, Katia Labazin, Roded Sharan:
Experimental design schemes for learning Boolean network models. Bioinform. 30(17): 445-452 (2014) - Peter Audano, Fredrik Vannberg:
KAnalyze: a fast versatile pipelined K-mer toolkit. Bioinform. 30(14): 2070-2072 (2014) - Özgün Babur, Bülent Arman Aksoy, Igor V. Rodchenkov, Selçuk Onur Sümer, Chris Sander, Emek Demir:
Pattern search in BioPAX models. Bioinform. 30(1): 139-140 (2014) - Sangsu Bae, Jeongbin Park, Jin-Soo Kim:
Cas-OFFinder: a fast and versatile algorithm that searches for potential off-target sites of Cas9 RNA-guided endonucleases. Bioinform. 30(10): 1473-1475 (2014) - Ahmet Bakan, Anindita Dutta, Wenzhi Mao, Ying Liu, Chakra Chennubhotla, Timothy R. Lezon, Ivet Bahar:
Evol and ProDy for bridging protein sequence evolution and structural dynamics. Bioinform. 30(18): 2681-2683 (2014) - Burcu Bakir-Gungor, Ece Egemen, Osman Ugur Sezerman:
PANOGA: a web server for identification of SNP-targeted pathways from genome-wide association study data. Bioinform. 30(9): 1287-1289 (2014) - Ergude Bao, Tao Jiang, Thomas Girke:
AlignGraph: algorithm for secondary de novo genome assembly guided by closely related references. Bioinform. 30(12): 319-328 (2014) - Lei Bao, Minya Pu, Karen Messer:
AbsCN-seq: a statistical method to estimate tumor purity, ploidy and absolute copy numbers from next-generation sequencing data. Bioinform. 30(8): 1056-1063 (2014)
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