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Katsuhiko Murakami
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Journal Articles
- 2013
- [j6]Jun-ichi Takeda, Chisato Yamasaki, Katsuhiko Murakami, Yoko Nagai, Miho Sera, Yuichiro Hara, Nobuo Obi, Takuya Habara, Takashi Gojobori, Tadashi Imanishi
:
H-InvDB in 2013: an omics study platform for human functional gene and transcript discovery. Nucleic Acids Res. 41(Database-Issue): 915-919 (2013) - 2012
- [j5]Shingo Kikugawa, Kensaku Nishikata, Katsuhiko Murakami, Yoshiharu Sato, Mami Suzuki, Md. Altaf-Ul-Amin, Shigehiko Kanaya, Tadashi Imanishi
:
PCDq: human protein complex database with quality index which summarizes different levels of evidences of protein complexes predicted from H-Invitational protein-protein interactions integrative dataset. BMC Syst. Biol. 6(S-2): S7 (2012) - 2010
- [j4]Chisato Yamasaki, Katsuhiko Murakami, Jun-ichi Takeda, Yoshiharu Sato, Akiko Ogura Noda, Ryuichi Sakate, Takuya Habara, Hajime Nakaoka, Fusano Todokoro, Akihiro Matsuya, Tadashi Imanishi
, Takashi Gojobori:
H-InvDB in 2009: extended database and data mining resources for human genes and transcripts. Nucleic Acids Res. 38(Database-Issue): 626-632 (2010) - 2009
- [j3]Yoshihiro Kawahara, Ryuichi Sakate, Akihiro Matsuya, Katsuhiko Murakami, Yoshiharu Sato, Hao Zhang, Takashi Gojobori, Takeshi Itoh
, Tadashi Imanishi
:
G-compass: a web-based comparative genome browser between human and other vertebrate genomes. Bioinform. 25(24): 3321-3322 (2009) - 2008
- [j2]Akihiro Matsuya, Ryuichi Sakate, Yoshihiro Kawahara, Kanako O. Koyanagi
, Yoshiharu Sato, Yasuyuki Fujii, Chisato Yamasaki, Takuya Habara, Hajime Nakaoka, Fusano Todokoro, Kaori Yamaguchi, Toshinori Endo, Satoshi Ota, Wojciech Makalowski
, Kazuho Ikeo, Yoshiyuki Suzuki, Kousuke Hanada, Katsuyuki Hashimoto, Momoki Hirai, Hisakazu Iwama, Naruya Saitou, Aiko T. Hiraki
, Lihua Jin, Yayoi Kaneko, Masako Kanno, Katsuhiko Murakami, Akiko Ogura Noda, Naomi Saichi, Ryoko Sanbonmatsu, Mami Suzuki, Jun-ichi Takeda, Masayuki Tanaka
, Takashi Gojobori, Tadashi Imanishi
, Takeshi Itoh
:
Evola: Ortholog database of all human genes in H-InvDB with manual curation of phylogenetic trees. Nucleic Acids Res. 36(Database-Issue): 787-792 (2008) - 1998
- [j1]Katsuhiko Murakami, Toshihisa Takagi:
Gene recognition by combination of several gene-finding programs. Bioinform. 14(8): 665-675 (1998)
Conference and Workshop Papers
- 2023
- [c17]Koichi Akashi, Hibiki Ito, Kunihiko Takamatsu, Shotaro Imai, Sayaka Matsumoto, Katsuhiko Murakami, Tetsuhiro Gozu:
Fully Automated System for the Marking and Quantitative Assessment of Reading Skills of Students Based on Abridgement. IIAI-AAI-Winter 2023: 143-148 - [c16]Katsuhiko Murakami, Aoi Kishida, Hibiki Ito, Sayaka Matsumoto
, Kunihiko Takamatsu
:
Deciphering the code of the novel "The Dancing Men". ICSC 2023: 296-297 - 2022
- [c15]Katsuhiko Murakami:
Biomarker discovery using contaminated mixed tumor samples. IIAI-AAI-Winter 2022: 148-151 - 2020
- [c14]Kunihiko Takamatsu
, Katsuhiko Murakami, Yasuhiro Kozaki, Aoi Kishida, Takafumi Kirimura, Kenya Bannaka, Kenichiro Mitsunari, Masato Omori, Yasuo Nakata:
Introducing new criteria for IR, using student data compared analysis based on Eduinformatics. IIAI-AAI 2020: 374-380 - [c13]Yasuo Nakata, Kenya Bannaka, Katsuhiko Murakami, Yasuhiro Kozaki, Kenichiro Mitsunari, Kunihiko Takamatsu
:
Evaluation of a First-Year Course Using Factor Analysis. IIAI-AAI 2020: 381-386 - 2019
- [c12]Kunihiko Takamatsu
, Katsuhiko Murakami, Tsugumi Oshiro, Aoi Sugiura, Kenya Bannaka, Yasuo Nakata:
Predicting the Probability of Student's Academic Abilities and Progress with EMIR and Data from Current and Graduated Students. IIAI-AAI 2019: 359-362 - [c11]Yasuo Nakata, Katsuhiko Murakami, Yasuhiro Kozaki, Takafumi Kirimura, Aoi Sugiura, Kenya Bannaka, Kunihiko Takamatsu
:
New Proposal to Compare Student Data in Institutional Research. IIAI-AAI 2019: 404-407 - [c10]Takahiro Kawamura
, Shusaku Egami
, Koutarou Tamura, Yasunori Hokazono, Takanori Ugai
, Yusuke Koyanagi, Fumihito Nishino, Seiji Okajima, Katsuhiko Murakami, Kunihiko Takamatsu
, Aoi Sugiura, Shun Shiramatsu, Xiangyu Zhang, Kouji Kozaki:
Report on the First Knowledge Graph Reasoning Challenge 2018. JIST 2019: 18-34 - 2018
- [c9]Kunihiko Takamatsu
, Katsuhiko Murakami, Yasuhiro Kozaki, Kenya Bannaka, Ikuhiro Noda, Raphael-Joel Wei Lim, Kenichiro Mitsunari, Tadashi Nakamura, Yasuo Nakata:
A New Way of Visualizing Curricula Using Competencies: Cosine Similarity and t-SNE. IIAI-AAI 2018: 390-395 - [c8]Mayasuki Seki, Yasuo Nakata, Yasuhiro Kozaki, Katsuhiko Murakami, Eriko Matsumoto, Kenya Bannaka, Ikuhiro Noda, Kenichiro Mitsunari, Kunihiko Takamatsu
:
Generic Support System Prototype in Eduinformatics for Students Selecting a Seminar. IIAI-AAI 2018: 470-473 - [c7]Katsuhiko Murakami, Kunihiko Takamatsu
, Yasuhiro Kozaki, Aoi Kishida, Kenya Bannaka, Ikuhiro Noda, Asahi Jyunichiro, Kazuyoshi Takao, Kenichiro Mitsunari, Tadashi Nakamura, Yasuo Nakata:
Predicting the Probability of Student Dropout through EMIR Using Data from Current and Graduate Students. IIAI-AAI 2018: 478-481 - 2017
- [c6]Kunihiko Takamatsu
, Katsuhiko Murakami, Takafumi Kirimura, Kenya Bannaka, Ikuhiro Noda, Mayumi Yamasaki, Raphael-Joel Wei Lim, Kenichiro Mitsunari, Tadashi Nakamura, Yasuo Nakata:
A New Way of Visualizing Curricula Using Competencies: Cosine Similarity, Multidimensional Scaling Methods, and Scatter Plotting. IIAI-AAI 2017: 192-197 - 2015
- [c5]Katsuhiko Murakami:
Extraction of latent concepts from an integrated human gene database: Non-negative matrix factorization for identification of hidden data structure. SoCPaR 2015: 346-350 - 1999
- [c4]Katsuhiko Murakami, Tohru Nakagawa:
Solving a graph layout problem using strictly digital neural networks with virtual slack-neurons. IJCNN 1999: 675-679 - [c3]Katsuhiko Murakami, Toshihisa Takagi:
Clustering and Detection of 5' Splice Sites of mRNA by k Weight-Matrices Model. Pacific Symposium on Biocomputing 1999: 171-181 - 1995
- [c2]Katsuhiko Murakami, Tohru Nakagawa, Hajime Kitagawa:
Solving the bipartite subgraph problems using strictly digital neural networks with virtual slack-neurons. ICNN 1995: 2636-2641 - 1993
- [c1]Tohru Nakagawa, Katsuhiko Murakami, Hajime Kitagawa:
Strictly digital neurocomputer based on a paradigm of constraint set programming for solving combinatorial optimization problems. ICNN 1993: 1086-1091
Informal and Other Publications
- 2019
- [i2]Takahiro Kawamura, Shusaku Egami, Koutarou Tamura, Yasunori Hokazono, Takanori Ugai, Yusuke Koyanagi, Fumihito Nishino, Seiji Okajima, Katsuhiko Murakami, Kunihiko Takamatsu, Aoi Sugiura, Shun Shiramatsu, Shawn Zhang, Kouji Kozaki:
Report on the First Knowledge Graph Reasoning Challenge 2018 - Toward the eXplainable AI System. CoRR abs/1908.08184 (2019) - [i1]Toshiaki Katayama
, Shuichi Kawashima, Gos Micklem
, Shin Kawano
, Jin-Dong Kim, Simon Kocbek, Shinobu Okamoto, Yue Wang, Hongyan Wu, Atsuko Yamaguchi
, Yasunori Yamamoto, Erick Antezana
, Kiyoko F. Aoki-Kinoshita
, Kazuharu Arakawa, Masaki Banno, Joachim Baran, Jerven T. Bolleman
, Raoul Jean Pierre Bonnal, Hidemasa Bono
, Jesualdo Tomás Fernández-Breis, Robert M. Buels, Matthew P. Campbell, Hirokazu Chiba, Peter J. A. Cock, Kevin Bretonnel Cohen, Michel Dumontier, Takatomo Fujisawa, Toyofumi Fujiwara, Leyla J. García
, Pascale Gaudet
, Emi Hattori, Robert Hoehndorf
, Kotone Itaya, Maori Ito, Daniel Jamieson, Simon Jupp, Nick S. Juty, Alex Kalderimis, Fumihiro Kato
, Hideya Kawaji, Takeshi Kawashima, Akira R. Kinjo, Yusuke Komiyama, Masaaki Kotera
, Tatsuya Kushida
, James Malone, Masaaki Matsubara, Satoshi Mizuno, Sayaka Mizutani
, Hiroshi Mori, Yuki Moriya
, Katsuhiko Murakami, Takeru Nakazato, Hiroyo Nishide, Yosuke Nishimura
, Soichi Ogishima, Tazro Ohta
, Shujiro Okuda, Hiromasa Ono
, Yasset Pérez-Riverol
, Daisuke Shinmachi, Andrea Splendiani, Francesco Strozzi
, Shinya Suzuki
, Junichi Takehara, Mark Thompson, Toshiaki Tokimatsu, Ikuo Uchiyama
, Karin Verspoor
, Mark D. Wilkinson
, Sarala M. Wimalaratne, Issaku Yamada
, Nozomi Yamamoto, Masayuki Yarimizu, Shoko Kawamoto, Toshihisa Takagi:
BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services. F1000Research 8: 1677 (2019)
Coauthor Index
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