5. RECOMB 2001: Montréal, Québec, Canada

• Mark Adams:
  The sequence of the human genome (abstract only). 1
  
• Abdullah N. Arslan, Ömer Egecioglu, Pavel A. Pevzner:
  A new approach to sequence comparison: normalized sequence alignment. 2-11
  
• Yoseph Barash, Nir Friedman:
  Context-specific Bayesian clustering for gene expression data. 12-21
  
• Richard Beigel, Noga Alon, Simon Kasif, Mehmet Serkan Apaydin, Lance Fortnow:
  An optimal procedure for gap closing in whole genome shotgun sequencing. 22-30
  
• Amir Ben-Dor, Nir Friedman, Zohar Yakhini:
  Class discovery in gene expression data. 31-38
  
• Yonatan Bilu, Michal Linial:
  On the predictive power of sequence similarity in yeast. 39-48
  
• Mathieu Blanchette:
  Algorithms for phylogenetic footprinting. 49-58
  
• Phil Bradley, Lenore Cowen, Matthew Menke, Jonathan King, Bonnie Berger:
  Predicting the beta-helix fold from protein sequence data. 59-67
  
• Roger Brent:
  Information processing by cells and biologists (abstract only). 68
  
• Jeremy Buhler, Martin Tompa:
  Finding motifs using random projections. 69-76
  
• Ralf Bundschuh:
  Rapid significance estimation in local sequence alignment with gaps. 77-85
  
• Harmen J. Bussemaker, Hao Li, Eric D. Siggia:
  Regulatory element detection using correlation with expression (abstract only). 86
  
• Ting Chen:
  Gene-finding via tandem mass spectrometry. 87-94
  
• Ting Chen, Jacob D. Jaffe, George M. Church:
  Algorithms for identifying protein cross-links via tandem mass spectrometry. 95-102
  
• George M. Church:
  Hunger for new technologies, metrics, and spatiotemporal models in functional genomic (abstract only). 103
  
• Miklós Csürös:
  Fast recovery of evolutionary trees with thousands of nodes. 104-113
  
• Alon Efrat, Frank Hoffmann, Klaus Kriegel, Christof Schultz, Carola Wenk:
  Geometric algorithms for the analysis of 2D-electrophoresis gels. 114-123
  
• Vladimir Filkov, Steven Skiena, Jizu Zhi:
  Analysis techniques for microarray time-series data. 124-131
  
• Nir Friedman, Matan Ninio, Itsik Pe'er, Tal Pupko:
  A structural EM algorithm for phylogenetic inference. 132-140
  
• Alan M. Frieze, Bjarni V. Halldórsson:
  Optimal sequencing by hybridization in rounds. 141-148
  
• Michael T. Hallett, Jens Lagergren:
  Efficient algorithms for lateral gene transfer problems. 149-156
  
• Daniel H. Huson, Knut Reinert, Eugene W. Myers:
  The greedy path-merging algorithm for sequence assembly. 157-163
  
• Christopher James Langmead, Bruce Randall Donald:
  Extracting structural information using time-frequency analysis of protein NMR data. 164-175
  
• John D. Kececioglu, Jun Ju:
  Separtating repeats in DNA sequence assembly. 176-183
  
• Oliver Kohlbacher, Andreas Burchardt, Andreas Moll, Andreas Hildebrandt, Peter Bayer, Hans-Peter Lenhof:
  A NMR-spectra-based scoring function for protein docking. 184-192
  
• Giuseppe Lancia, Robert D. Carr, Brian Walenz, Sorin Istrail:
  101 optimal PDB structure alignments: a branch-and-cut algorithm for the maximum contact map overlap problem. 193-202
  
• B. Franz Lang:
  Comparative analysis of organelle genomes, a biologist's view of computational challenges (abstract only). 203
  
• Wentian Li:
  DNA segmentation as a model selection process. 204-210
  
• Guohui Lin, Bin Ma, Kaizhong Zhang:
  Edit distance between two RNA structures. 211-220
  
• Klaus Lindpaintner:
  Genetics and genemoics: impact on drug discovery and development. 221-222
  
• Yvonne C. Martin:
  The role of computational chemistry in translating genomic information into bioactive small molecules (abstract only). 223
  
• Gene Myers:
  Comparing sequence scaffolds. 224-230
  
• Gonzalo Navarro, Mathieu Raffinot:
  Fast and simple character classes and bounded gaps pattern matching, with application to protein searching. 231-240
  
• Lior Pachter, Marina Alexandersson, Simon Cawley:
  Applications of generalized pair hidden Markov models to alignment and gene finding problems. 241-248
  
• Paul Pavlidis, Jason Weston, Jinsong Cai, William Noble Grundy:
  Gene functional classification from heterogeneous data. 249-255
  
• Pavel A. Pevzner, Haixu Tang, Michael S. Waterman:
  A new approach to fragment assembly in DNA sequencing. 256-267
  
• Mark Ptashne:
  Imposing specificity by regulated localization (abstract only). 268
  
• Ron Shamir, Dekel Tsur:
  Large scale sequencing by hybridization. 269-277
  
• Phillip A. Sharp:
  RNA biology and the genome (abstract only). 278
  
• Mona Singh, Peter S. Kim:
  Towards predicting coiled-coil protein interactions. 279-286
  
• Guang Song, Nancy M. Amato:
  Using motion planning to study protein folding pathways. 287-296
  
• Mengxiang Tang, Michael S. Waterman, Shibu Yooseph:
  Zinc finger gene clusters and tandem gene duplication. 297-304
  
• Gert Thijs, Kathleen Marchal, Magali Lescot, Stephane Rombauts, Bart De Moor, Pierre Rouzé, Yves Moreau:
  A Gibbs sampling method to detect over-represented motifs in the upstream regions of co-expressed genes. 305-312
  
• Matthias Wilm:
  Creating the backbone for the virtual cell: cell mapping projects on the run (abstract only). 313
  

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