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Publication search results
found 17 matches
- 2023
- Matthew R. Carbone, Stepan Fomichev, Andrew J. Millis, Mona Berciu, David R. Reichman, John Sous:
The Generalized Green's function Cluster Expansion: A Python package for simulating polarons. J. Open Source Softw. 8(90): 5115 (2023) - Matthew R. Carbone, Fanchen Meng, Christian Vorwerk, Benedikt Maurer, Fabian Peschel, Xiaohui Qu, Eli Stavitski, Claudia Draxl, John Vinson, Deyu Lu:
Lightshow: a Python package for generating computational x-ray absorption spectroscopy input files. J. Open Source Softw. 8(87): 5182 (2023) - Adam Frankish, Silvia Carbonell Sala, Mark Diekhans, Irwin Jungreis, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Carme Arnan, If Barnes, Abhimanyu Banerjee, Ruth Bennett, Andrew E. Berry, Alexandra Bignell, Carles Boix, Ferriol Calvet Riera, Daniel Cerdán-Vélez, Fiona Cunningham, Claire Davidson, Sarah M. Donaldson, Cagatay Dursun, Reham Fatima, Stefano Giorgetti, Carlos García-Girón, Jose M. Gonzalez, Matthew Hardy, Peter W. Harrison, Thibaut Hourlier, Zoe Hollis, Toby Hunt, Benjamin James, Yunzhe Jiang, Rory Johnson, Mike P. Kay, Julien Lagarde, Fergal J. Martin, Laura Martínez Gómez, Surag Nair, Pengyu Ni, Fernando Pozo, Vivek Ramalingam, Magali Ruffier, Bianca M. Schmitt, Jacob M. Schreiber, Emily Steed, Marie-Marthe Suner, Dulika Sumathipala, Irina Sycheva, Barbara Uszczynska-Ratajczak, Elizabeth Wass, Yucheng T. Yang, Andrew D. Yates, Zahoor Zafrulla, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Anshul Kundaje, Benedict Paten, Michael L. Tress, Paul Flicek:
GENCODE: reference annotation for the human and mouse genomes in 2023. Nucleic Acids Res. 51(D1): 942-949 (2023) - Monica Laurenza, Dario Del Moro, Tommaso Alberti, Roberto Battiston, Simone Benella, F. Benvenuto, Francesco Berrilli, Igor Bertello, Bruna Bertucci, L. Biasiotti, Cristina Campi, Vincenzo Carbone, M. Casolino, C. Cecchi Pestellini, Federica Chiappetta, Igino Coco, S. Colombo, Giuseppe Consolini, Raffaella D'Amicis, Giancarlo De Gasperis, Rossana De Marco, Alfredo Del Corpo, Piero Diego, Valeria Di Felice, Luca Di Fino, C. Di Geronimo, F. Faldi, Fabiana Ferrente, C. Feruglio, E. Fiandrini, Fabrizio Fiore, Raffaello Foldes, Valerio Formato, G. Francisco, Fabio Giannattasio, Marco Giardino, P. Giobbi, Luca Giovannelli, M. Giusti, A. Gorgi, Balázs Heilig, Giulia Iafrate, S. L. Ivanovski, G. Jerse, M. B. Korsos, Fabio Lepreti, D. Locci, Carmelo Magnafico, V. Mangano, Maria Federica Marcucci, M. Martucci, Stefano Massetti, G. Micela, Anna Milillo, R. Miteva, M. Molinaro, R. Mugatwala, A. Mura, G. Napoletano, Livio Narici, Coralie Neubüser, G. Nisticò, M. Pauluzzi, Alessandro Perfetti, S. Perri, Antonino Petralia, Michael Pezzopane, Mirko Piersanti, Ermanno Pietropaolo, Alessio Pignalberi, C. Plainaki, Gianluca Polenta, Leonardo Primavera, Giulia Romoli, M. Rossi, Lucia Santarelli, G. Santi Amantini, Federico Siciliano, Giuseppe Sindoni, S. Spadoni, Roberta Sparvoli, Mirko Stumpo, Nicola Tomassetti, Roberta Tozzi, Valerio Vagelli, N. Vasantharaju, Antonio Vecchio, Massimo Vellante, S. Vernetto, Carlo Francesco Vigorito, Matthew J. West, Gaetano Zimbardo, P. Zucca, Francesca Zuccarello, Paolo Zuccon:
The CAESAR Project for the ASI Space Weather Infrastructure. Remote. Sens. 15(2): 346 (2023) - Wei Chen, Yihui Ren, Ai Kagawa, Matthew R. Carbone, Samuel Yen-Chi Chen, Xiaohui Qu, Shinjae Yoo, Austin Clyde, Arvind Ramanathan, Rick L. Stevens, Hubertus Van Dam, Deyu Lu:
Transferable Graph Neural Fingerprint Models for Quick Response to Future Bio-Threats. ICMLA 2023: 800-807 - Zhu Liang, Matthew R. Carbone, Wei Chen, Fanchen Meng, Eli Stavitski, Deyu Lu, Mark S. Hybertsen, Xiaohui Qu:
Decoding Structure-Spectrum Relationships with Physically Organized Latent Spaces. CoRR abs/2301.04724 (2023) - Phillip M. Maffettone, Daniel B. Allan, Stuart I. Campbell, Matthew R. Carbone, Thomas A. Caswell, Brian L. DeCost, Dmitri Gavrilov, Marcus D. Hanwell, Howie Joress, Joshua K. Lynch, Bruce Ravel, Stuart B. Wilkins, Jakub Wlodek, Daniel Olds:
Self-driving Multimodal Studies at User Facilities. CoRR abs/2301.09177 (2023) - Wei Chen, Yihui Ren, Ai Kagawa, Matthew R. Carbone, Samuel Yen-Chi Chen, Xiaohui Qu, Shinjae Yoo, Austin Clyde, Arvind Ramanathan, Rick L. Stevens, Hubertus Johannes Jacobus Van Dam, Deyu Lu:
Transferable Graph Neural Fingerprint Models for Quick Response to Future Bio-Threats. CoRR abs/2308.01921 (2023) - Hyuna Kwon, Tim Hsu, Wenyu Sun, Wonseok Jeong, Fikret Aydin, James Chapman, Xiao Chen, Matthew R. Carbone, Deyu Lu, Fei Zhou, Tuan Anh Pham:
Spectroscopy-Guided Discovery of Three-Dimensional Structures of Disordered Materials with Diffusion Models. CoRR abs/2312.05472 (2023) - 2022
- Matthew R. Carbone:
When not to use machine learning: a perspective on potential and limitations. CoRR abs/2210.02666 (2022) - 2021
- Matthew Ralph Carbone:
Dynamical processes in the condensed phase: methods and models. Columbia University, USA, 2021 - Adam Frankish, Mark Diekhans, Irwin Jungreis, Julien Lagarde, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Joel Armstrong, If Barnes, Andrew E. Berry, Alexandra Bignell, Carles Boix, Silvia Carbonell Sala, Fiona Cunningham, Tomás Di Domenico, Sarah M. Donaldson, Ian T. Fiddes, Carlos García-Girón, Jose M. Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Kevin L. Howe, Toby Hunt, Osagie G. Izuogu, Rory Johnson, Fergal J. Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Ferriol Calvet Riera, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Maxim Y. Wolf, Jinrui Xu, Yucheng T. Yang, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Michael L. Tress, Paul Flicek:
GENCODE 2021. Nucleic Acids Res. 49(Database-Issue): D916-D923 (2021) - Cole Miles, Matthew R. Carbone, Erica J. Sturm, Deyu Lu, Andreas Weichselbaum, Kipton Barros, Robert M. Konik:
Machine-learning Kondo physics using variational autoencoders. CoRR abs/2107.08013 (2021) - 2019
- Adam Frankish, Mark Diekhans, Anne-Maud Ferreira, Rory Johnson, Irwin Jungreis, Jane E. Loveland, Jonathan M. Mudge, Cristina Sisu, James C. Wright, Joel Armstrong, If Barnes, Andrew E. Berry, Alexandra Bignell, Silvia Carbonell Sala, Jacqueline Chrast, Fiona Cunningham, Tomás Di Domenico, Sarah M. Donaldson, Ian T. Fiddes, Carlos García-Girón, Jose M. Gonzalez, Tiago Grego, Matthew Hardy, Thibaut Hourlier, Toby Hunt, Osagie G. Izuogu, Julien Lagarde, Fergal J. Martin, Laura Martínez, Shamika Mohanan, Paul Muir, Fabio C. P. Navarro, Anne Parker, Baikang Pei, Fernando Pozo, Magali Ruffier, Bianca M. Schmitt, Eloise Stapleton, Marie-Marthe Suner, Irina Sycheva, Barbara Uszczynska-Ratajczak, Jinrui Xu, Andrew D. Yates, Daniel R. Zerbino, Yan Zhang, Bronwen L. Aken, Jyoti Choudhary, Mark Gerstein, Roderic Guigó, Tim J. P. Hubbard, Manolis Kellis, Benedict Paten, Alexandre Reymond, Michael L. Tress, Paul Flicek:
GENCODE reference annotation for the human and mouse genomes. Nucleic Acids Res. 47(Database-Issue): D766-D773 (2019) - Aditi Chaudhary, Siddharth Dalmia, Junjie Hu, Xinjian Li, Austin Matthews, Aldrian Obaja Muis, Naoki Otani, Shruti Rijhwani, Zaid Sheikh, Nidhi Vyas, Xinyi Wang, Jiateng Xie, Ruochen Xu, Chunting Zhou, Peter J. Jansen, Yiming Yang, Lori S. Levin, Florian Metze, Teruko Mitamura, David R. Mortensen, Graham Neubig, Eduard H. Hovy, Alan W. Black, Jaime G. Carbonell, Graham Horwood, Shabnam Tafreshi, Mona T. Diab, Efsun Sarioglu Kayi, Noura Farra, Kathleen R. McKeown:
The ARIEL-CMU Systems for LoReHLT18. CoRR abs/1902.08899 (2019) - 2016
- Jeremy L. Warner, Matthew J. Rioth, Kenneth D. Mandl, Joshua C. Mandel, David A. Kreda, Isaac S. Kohane, Daniel Carbone, Ross Oreto, Lucy Wang, Shilin Zhu, Heming Yao, Gil Alterovitz:
SMART precision cancer medicine: a FHIR-based app to provide genomic information at the point of care. J. Am. Medical Informatics Assoc. 23(4): 701-710 (2016) - 2003
- Scott C. Simmons, Timothy A. Murphy, Adrian Blanarovich, Florence T. Workman, David A. Rosenthal, Matthew Carbone:
Application of Information Technology: Telehealth Technologies and Applications for Terrorism Response: A Report of the 2002 Coastal North Carolina Domestic Preparedness Training Exercise. J. Am. Medical Informatics Assoc. 10(2): 166-176 (2003)
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