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Sandhya Prabhakaran
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Journal Articles
- 2022
- [j7]Sandhya Prabhakaran
, Chandler Gatenbee, Mark Robertson-Tessi, Jeffrey West
, Amer A. Beg, Jhanelle Gray, Scott Antonia, Robert A. Gatenby, Alexander R. A. Anderson
:
Mistic: An open-source multiplexed image t-SNE viewer. Patterns 3(7): 100523 (2022) - [j6]Sandhya Prabhakaran, Chandler Gatenbee, Alexander R. A. Anderson:
Developing tools for analyzing and viewing multiplexed images. Patterns 3(7): 100549 (2022) - 2019
- [j5]Abdoulaye Baniré Diallo, Engelbert Mephu Nguifo, Wajdi Dhifli
, Elham Azizi
, Sandhya Prabhakaran, Wesley Tansey:
Selected Papers from the Workshop on Computational Biology: Joint with the International Joint Conference on Artificial Intelligence and the International Conference on Machine Learning, 2018. J. Comput. Biol. 26(6): 507-508 (2019) - 2015
- [j4]Julia E. Vogt
, Marius Kloft, Stefan Stark, Sudhir Raman, Sandhya Prabhakaran, Volker Roth
, Gunnar Rätsch
:
Probabilistic clustering of time-evolving distance data. Mach. Learn. 100(2-3): 635-654 (2015) - 2014
- [j3]Sandhya Prabhakaran, Mélanie Rey, Osvaldo Zagordi
, Niko Beerenwinkel, Volker Roth
:
HIV Haplotype Inference Using a Propagating Dirichlet Process Mixture Model. IEEE ACM Trans. Comput. Biol. Bioinform. 11(1): 182-191 (2014) - 2013
- [j2]Armin Töpfer, Osvaldo Zagordi
, Sandhya Prabhakaran, Volker Roth
, Eran Halperin, Niko Beerenwinkel:
Probabilistic Inference of Viral Quasispecies Subject to Recombination. J. Comput. Biol. 20(2): 113-123 (2013) - [j1]Sandhya Prabhakaran, David Adametz, Karin J. Metzner
, Alexander Böhm, Volker Roth
:
Recovering networks from distance data. Mach. Learn. 92(2-3): 251-283 (2013)
Conference and Workshop Papers
- 2019
- [c6]Sandhya Prabhakaran, Julia E. Vogt
:
Bayesian Clustering for HIV1 Protease Inhibitor Contact Maps. AIME 2019: 281-285 - 2016
- [c5]Sandhya Prabhakaran, Elham Azizi, Ambrose J. Carr, Dana Pe'er:
Dirichlet Process Mixture Model for Correcting Technical Variation in Single-Cell Gene Expression Data. ICML 2016: 1070-1079 - 2012
- [c4]Sandhya Prabhakaran, Sudhir Raman, Julia E. Vogt
, Volker Roth
:
Automatic Model Selection in Archetype Analysis. DAGM/OAGM Symposium 2012: 458-467 - [c3]Osvaldo Zagordi
, Armin Töpfer, Sandhya Prabhakaran, Volker Roth
, Eran Halperin, Niko Beerenwinkel:
Probabilistic Inference of Viral Quasispecies Subject to Recombination. RECOMB 2012: 342-354 - [c2]Sandhya Prabhakaran, Karin J. Metzner, Alexander Böhm, Volker Roth:
Recovering Networks from Distance Data. ACML 2012: 349-364 - 2010
- [c1]Julia E. Vogt, Sandhya Prabhakaran, Thomas J. Fuchs, Volker Roth:
The Translation-invariant Wishart-Dirichlet Process for Clustering Distance Data. ICML 2010: 1111-1118
Parts in Books or Collections
- 2013
- [p1]Volker Roth
, Thomas J. Fuchs, Julia E. Vogt, Sandhya Prabhakaran, Joachim M. Buhmann:
Structure Preserving Embedding of Dissimilarity Data. Similarity-Based Pattern Analysis and Recognition 2013: 157-177
Informal and Other Publications
- 2019
- [i2]Cassandra Burdziak, Elham Azizi, Sandhya Prabhakaran, Dana Pe'er:
A Nonparametric Multi-view Model for Estimating Cell Type-Specific Gene Regulatory Networks. CoRR abs/1902.08138 (2019) - 2015
- [i1]Julia E. Vogt, Marius Kloft, Stefan Stark, Sudhir Raman, Sandhya Prabhakaran, Volker Roth, Gunnar Rätsch:
Probabilistic Clustering of Time-Evolving Distance Data. CoRR abs/1504.03701 (2015)
Coauthor Index
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