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Gerard Gorman
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Journal Articles
- 2023
- [j12]Carlos Cueto, Oscar Bates, George Strong, Javier Cudeiro, Thomas Caradoc Robins, Fabio Luporini, Oscar Calderon Agudo, Gerard Gorman, Lluís Guasch, Meng-Xing Tang:
Corrigendum to Stride: A flexible software platform for high-performance ultrasound computed tomography Computer Methods and Programs in Biomedicine 221 (2022) 106855. Comput. Methods Programs Biomed. 240: 107710 (2023) - 2022
- [j11]Carlos Cueto, Oscar Bates, George Strong, Javier Cudeiro, Fabio Luporini, Oscar Calderon Agudo, Gerard Gorman, Lluís Guasch, Meng-Xing Tang:
Stride: A flexible software platform for high-performance ultrasound computed tomography. Comput. Methods Programs Biomed. 221: 106855 (2022) - 2020
- [j10]Fabio Luporini, Mathias Louboutin, Michael Lange, Navjot Kukreja, Philipp A. Witte, Jan Hückelheim, Charles Yount, Paul H. J. Kelly, Felix J. Herrmann, Gerard J. Gorman:
Architecture and Performance of Devito, a System for Automated Stencil Computation. ACM Trans. Math. Softw. 46(1): 6:1-6:28 (2020) - 2019
- [j9]Fabio Luporini, Michael Lange, Christian T. Jacobs, Gerard J. Gorman, J. Ramanujam, Paul H. J. Kelly:
Automated Tiling of Unstructured Mesh Computations with Application to Seismological Modeling. ACM Trans. Math. Softw. 45(2): 17:1-17:30 (2019) - 2017
- [j8]Mathias Louboutin, Michael Lange, Felix J. Herrmann, Navjot Kukreja, Gerard Gorman:
Performance prediction of finite-difference solvers for different computer architectures. Comput. Geosci. 105: 148-157 (2017) - 2016
- [j7]Kristian Ejlebjerg Jensen, Gerard Gorman:
Details of tetrahedral anisotropic mesh adaptation. Comput. Phys. Commun. 201: 135-143 (2016) - [j6]Michael Lange, Lawrence Mitchell, Matthew G. Knepley, Gerard J. Gorman:
Efficient Mesh Management in Firedrake Using PETSc DMPlex. SIAM J. Sci. Comput. 38(5) (2016) - 2012
- [j5]James Southern, Gerard J. Gorman, M. D. Piggott, Patrick E. Farrell:
Parallel anisotropic mesh adaptivity with dynamic load balancing for cardiac electrophysiology. J. Comput. Sci. 3(1-2): 8-16 (2012) - 2010
- [j4]James Southern, Gerard J. Gorman, M. D. Piggott, Patrick E. Farrell, Miguel O. Bernabeu, Joe Pitt-Francis:
Simulating cardiac electrophysiology using anisotropic mesh adaptivity. J. Comput. Sci. 1(2): 82-88 (2010) - 2008
- [j3]Gerard J. Gorman, M. D. Piggott, M. R. Wells, Christopher C. Pain, Peter A. Allison:
A systematic approach to unstructured mesh generation for ocean modelling using GMT and Terreno. Comput. Geosci. 34(12): 1721-1731 (2008) - 2007
- [j2]Gerard J. Gorman, M. D. Piggott, Christopher C. Pain:
Shoreline approximation for unstructured mesh generation. Comput. Geosci. 33(5): 666-677 (2007) - 2006
- [j1]P. W. Power, Christopher C. Pain, M. D. Piggott, Fangxin Fang, Gerard J. Gorman, A. P. Umpleby, Anthony J. H. Goddard, I. M. Navon:
Adjoint A Posteriori Error Measures for Anisotropic Mesh Optimisation. Comput. Math. Appl. 52(8-9): 1213-1242 (2006)
Conference and Workshop Papers
- 2021
- [c17]George Bisbas, Fabio Luporini, Mathias Louboutin, Rhodri Nelson, Gerard J. Gorman, Paul H. J. Kelly:
Temporal blocking of finite-difference stencil operators with sparse "off-the-grid" sources. IPDPS 2021: 497-506 - 2019
- [c16]Vitor Hugo Mickus Rodrigues, Lucas Cavalcante, Maelso Bruno Pereira, Fabio Luporini, István Z. Reguly, Gerard Gorman, Samuel Xavier de Souza:
GPU Support for Automatic Generation of Finite-Differences Stencil Kernels. CARLA 2019: 230-244 - [c15]Navjot Kukreja, Jan Hückelheim, Mathias Louboutin, Paul D. Hovland, Gerard Gorman:
Combining Checkpointing and Data Compression to Accelerate Adjoint-Based Optimization Problems. Euro-Par 2019: 87-100 - [c14]Jan Hückelheim, Navjot Kukreja, Sri Hari Krishna Narayanan, Fabio Luporini, Gerard Gorman, Paul D. Hovland:
Automatic Differentiation for Adjoint Stencil Loops. ICPP 2019: 83:1-83:10 - [c13]Navjot Kukreja, Alena Shilova, Olivier Beaumont, Jan Hückelheim, Nicola J. Ferrier, Paul D. Hovland, Gerard Gorman:
Training on the Edge: The why and the how. IPDPS Workshops 2019: 899-903 - 2017
- [c12]Jan Hückelheim, Ziqing Luo, Fabio Luporini, Navjot Kukreja, Michael Lange, Gerard Gorman, Stephen F. Siegel, Matthew B. Dwyer, Paul D. Hovland:
Towards Self-Verification in Finite Difference Code Generation. CORRECTNESS@SC 2017: 42-49 - [c11]Michael Lange, Navjot Kukreja, Fabio Luporini, Mathias Louboutin, Charles Yount, Jan Hückelheim, Gerard J. Gorman:
Optimised finite difference computation from symbolic equations. SciPy 2017: 89-97 - 2016
- [c10]Navjot Kukreja, Mathias Louboutin, Felippe Vieira, Fabio Luporini, Michael Lange, Gerard Gorman:
Devito: Automated Fast Finite Difference Computation. WOLFHPC@SC 2016: 11-19 - [c9]Michael Lange, Navjot Kukreja, Mathias Louboutin, Fabio Luporini, Felippe Vieira, Vincenzo Pandolfo, Paulius Velesko, Paulius Kazakas, Gerard Gorman:
Devito: Towards a Generic Finite Difference DSL Using Symbolic Python. PyHPC@SC 2016: 67-75 - 2015
- [c8]Georgios Rokos, Gerard Gorman, Paul H. J. Kelly:
A Fast and Scalable Graph Coloring Algorithm for Multi-core and Many-core Architectures. Euro-Par 2015: 414-425 - 2013
- [c7]Michael Lange, Gerard Gorman, Michèle Weiland, Lawrence Mitchell, James Southern:
Achieving Efficient Strong Scaling with PETSc Using Hybrid MPI/OpenMP Optimisation. ISC 2013: 97-108 - 2012
- [c6]Georgios Rokos, Gerard Gorman:
PRAgMaTIc - Parallel Anisotropic Adaptive Mesh Toolkit. Facing the Multicore-Challenge 2012: 143-144 - [c5]Gerard J. Gorman, James Southern, Patrick E. Farrell, M. D. Piggott, Georgios Rokos, Paul H. J. Kelly:
Hybrid OpenMP/MPI Anisotropic Mesh Smoothing. ICCS 2012: 1513-1522 - 2011
- [c4]Georgios Rokos, Gerard Gorman, Paul H. J. Kelly:
Accelerating Anisotropic Mesh Adaptivity on nVIDIA's CUDA Using Texture Interpolation. Euro-Par (2) 2011: 387-398 - 2010
- [c3]James Southern, Gerard J. Gorman, M. D. Piggott, Patrick E. Farrell, Miguel O. Bernabeu, Joe Pitt-Francis:
Anisotropic mesh adaptivity for cardiac electrophysiology. ICCS 2010: 935-944 - 2004
- [c2]Olav Beckmann, Anthony J. Field, Gerard Gorman, Andrew Huff, Marc Hull, Paul H. J. Kelly:
Overcoming barriers to restructuring in a modular visualisation environment. LCR 2004: 1:1-1:7 - 2001
- [c1]Andrew Shearer, Gerard Gorman, Triona O'Doherty, Wilhelm J. M. van der Putten, Peter McCarthy, Lukasz Jelen:
Parallel image restoration with spatially variant point spread function: description and first clinical results. Medical Imaging: Image Processing 2001
Informal and Other Publications
- 2023
- [i36]Mathias Louboutin, Ziyi Yin, Rafael Orozco, Thomas J. Grady II, Ali Siahkoohi, Gabrio Rizzuti, Philipp A. Witte, Olav Møyner, Gerard J. Gorman, Felix J. Herrmann:
Learned multiphysics inversion with differentiable programming and machine learning. CoRR abs/2304.05592 (2023) - [i35]Edward Caunt, Rhodri Nelson, Fabio Luporini, Gerard Gorman:
A Novel Immersed Boundary Approach for Irregular Topography with Acoustic Wave Equations. CoRR abs/2309.03600 (2023) - [i34]George Bisbas, Rhodri Nelson, Mathias Louboutin, Paul H. J. Kelly, Fabio Luporini, Gerard Gorman:
Automated MPI code generation for scalable finite-difference solvers. CoRR abs/2312.13094 (2023) - 2021
- [i33]Christopher Pyles, François van Schalkwyk, Gerard J. Gorman, Marijan Beg, Lee Stott, Nir Levy, Ran Gilad-Bachrach:
PyBryt: auto-assessment and auto-grading for computational thinking. CoRR abs/2112.02144 (2021) - 2020
- [i32]Mathias Louboutin, Fabio Luporini, Philipp A. Witte, Rhodri Nelson, George Bisbas, Jan Thorbecke, Felix J. Herrmann, Gerard Gorman:
Scaling through abstractions - high-performance vectorial wave simulations for seismic inversion with Devito. CoRR abs/2004.10519 (2020) - [i31]Navjot Kukreja, Jan Hückelheim, Mathias Louboutin, John Washbourne, Paul H. J. Kelly, Gerard J. Gorman:
Lossy Checkpoint Compression in Full Waveform Inversion. CoRR abs/2009.12623 (2020) - [i30]George Bisbas, Fabio Luporini, Mathias Louboutin, Rhodri Nelson, Gerard Gorman, Paul H. J. Kelly:
Temporal blocking of finite-difference stencil operators with sparse "off-the-grid" sources. CoRR abs/2010.10248 (2020) - 2019
- [i29]Navjot Kukreja, Alena Shilova, Olivier Beaumont, Jan Hückelheim, Nicola J. Ferrier, Paul D. Hovland, Gerard Gorman:
Training on the Edge: The why and the how. CoRR abs/1903.03051 (2019) - [i28]Jan Hückelheim, Navjot Kukreja, Sri Hari Krishna Narayanan, Fabio Luporini, Gerard Gorman, Paul D. Hovland:
Automatic Differentiation for Adjoint Stencil Loops. CoRR abs/1907.02818 (2019) - [i27]Hermes Senger, Jaime F. de Souza, Edson Satoshi Gomi, Fabio Luporini, Gerard J. Gorman:
Performance of Devito on HPC-Optimised ARM Processors. CoRR abs/1908.03653 (2019) - [i26]Vitor Hugo Mickus Rodrigues, Lucas Cavalcante, Maelso Bruno Pereira, Fabio Luporini, István Z. Reguly, Gerard Gorman, Samuel Xavier de Souza:
GPU Support for Automatic Generation of Finite-Differences Stencil Kernels. CoRR abs/1912.00695 (2019) - 2018
- [i25]Navjot Kukreja, Jan Hückelheim, Michael Lange, Mathias Louboutin, Andrea Walther, Simon W. Funke, Gerard Gorman:
High-level python abstractions for optimal checkpointing in inversion problems. CoRR abs/1802.02474 (2018) - [i24]Navjot Kukreja, Jan Hückelheim, Gerard J. Gorman:
Backpropagation for long sequences: beyond memory constraints with constant overheads. CoRR abs/1806.01117 (2018) - [i23]Fabio Luporini, Michael Lange, Mathias Louboutin, Navjot Kukreja, Jan Hückelheim, Charles Yount, Philipp A. Witte, Paul H. J. Kelly, Gerard J. Gorman, Felix J. Herrmann:
Architecture and performance of Devito, a system for automated stencil computation. CoRR abs/1807.03032 (2018) - [i22]Mathias Louboutin, Michael Lange, Fabio Luporini, Navjot Kukreja, Philipp A. Witte, Felix J. Herrmann, Paulius Velesko, Gerard J. Gorman:
Devito: an embedded domain-specific language for finite differences and geophysical exploration. CoRR abs/1808.01995 (2018) - [i21]Navjot Kukreja, Jan Hückelheim, Mathias Louboutin, Kaiyuan Hou, Fabio Luporini, Paul D. Hovland, Gerard Gorman:
Combining checkpointing and data compression for large scale seismic inversion. CoRR abs/1810.05268 (2018) - 2017
- [i20]Michael Lange, Navjot Kukreja, Fabio Luporini, Mathias Louboutin, Charles Yount, Jan Hückelheim, Gerard J. Gorman:
Optimised finite difference computation from symbolic equations. CoRR abs/1707.03776 (2017) - [i19]Fabio Luporini, Michael Lange, Christian T. Jacobs, Gerard J. Gorman, J. Ramanujam, Paul H. J. Kelly:
Automated Tiling of Unstructured Mesh Computations with Application to Seismological Modelling. CoRR abs/1708.03183 (2017) - 2016
- [i18]Mathias Louboutin, Michael Lange, Felix J. Herrmann, Navjot Kukreja, Gerard Gorman:
Performance prediction of finite-difference solvers for different computer architectures. CoRR abs/1608.03984 (2016) - [i17]Navjot Kukreja, Mathias Louboutin, Felippe Vieira, Fabio Luporini, Michael Lange, Gerard Gorman:
Devito: automated fast finite difference computation. CoRR abs/1608.08658 (2016) - [i16]Michael Lange, Navjot Kukreja, Mathias Louboutin, Fabio Luporini, Felippe Vieira, Vincenzo Pandolfo, Paulius Velesko, Paulius Kazakas, Gerard Gorman:
Devito: Towards a generic Finite Difference DSL using Symbolic Python. CoRR abs/1609.03361 (2016) - [i15]Nicolas Barral, Matthew G. Knepley, Michael Lange, Matthew D. Piggott, Gerard J. Gorman:
Anisotropic mesh adaptation in Firedrake with PETSc DMPlex. CoRR abs/1610.09874 (2016) - 2015
- [i14]Georgios Rokos, Gerard Gorman, Paul H. J. Kelly:
A Fast and Scalable Graph Coloring Algorithm for Multi-core and Many-core Architectures. CoRR abs/1505.04086 (2015) - [i13]Georgios Rokos, Gerard J. Gorman, Paul H. J. Kelly:
An Interrupt-Driven Work-Sharing For-Loop Scheduler. CoRR abs/1505.04134 (2015) - [i12]Michael Lange, Matthew G. Knepley, Gerard J. Gorman:
Flexible, Scalable Mesh and Data Management using PETSc DMPlex. CoRR abs/1505.04633 (2015) - [i11]Georgios Rokos, Gerard J. Gorman, Kristian Ejlebjerg Jensen, Paul H. J. Kelly:
Thread Parallelism for Highly Irregular Computation in Anisotropic Mesh Adaptation. CoRR abs/1505.04694 (2015) - [i10]Christian T. Jacobs, Gerard J. Gorman, Lorraine Craig:
Experiences with efficient methodologies for teaching computer programming to geoscientists. CoRR abs/1505.05425 (2015) - [i9]Matthew G. Knepley, Michael Lange, Gerard J. Gorman:
Unstructured Overlapping Mesh Distribution in Parallel. CoRR abs/1506.06194 (2015) - [i8]Michael Lange, Lawrence Mitchell, Matthew G. Knepley, Gerard J. Gorman:
Efficient mesh management in Firedrake using PETSc-DMPlex. CoRR abs/1506.07749 (2015) - [i7]Alexandros Avdis, Christian T. Jacobs, Jon Hill, Matthew D. Piggott, Gerard J. Gorman:
Shoreline and Bathymetry Approximation in Mesh Generation for Tidal Renewable Simulations. CoRR abs/1510.01560 (2015) - 2014
- [i6]Christian T. Jacobs, Alexandros Avdis, Gerard J. Gorman, Matthew D. Piggott:
PyRDM: A Python-based library for automating the management and online publication of scientific software and data. CoRR abs/1405.7290 (2014) - [i5]Kristian Ejlebjerg Jensen, Gerard Gorman:
Anisotropic Mesh Adaptation, the Method of Moving Asymptotes and the global p-norm Stress Constraint. CoRR abs/1410.8104 (2014) - 2013
- [i4]Michael Lange, Gerard Gorman, Michèle Weiland, Lawrence Mitchell, James Southern:
Achieving Efficient Strong Scaling with PETSc using Hybrid MPI/OpenMP Optimisation. CoRR abs/1303.5275 (2013) - [i3]Michael Lange, Gerard Gorman, Michèle Weiland, Lawrence Mitchell, Xiaohu Guo, James Southern:
Benchmarking mixed-mode PETSc performance on high-performance architectures. CoRR abs/1307.4567 (2013) - [i2]Georgios Rokos, Gerard J. Gorman, James Southern, Paul H. J. Kelly:
A thread-parallel algorithm for anisotropic mesh adaptation. CoRR abs/1308.2480 (2013) - 2012
- [i1]Michèle Weiland, Lawrence Mitchell, Gerard Gorman, Stephan Kramer, Mark Parsons, James Southern:
Mixed-mode implementation of PETSc for scalable linear algebra on multi-core processors. CoRR abs/1205.2005 (2012)
Coauthor Index
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