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ORCIDFelipe A. Louza
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- affiliation: Federal University of Uberlândia, Uberlândia, Brazil
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Books and Theses
- 2020
[b2]Felipe A. Louza, Simon Gog, Guilherme P. Telles:
Construction of Fundamental Data Structures for Strings. Springer Briefs in Computer Science, Springer 2020, ISBN 978-3-030-55107-0, pp. 3-101- 2017
- [b1]Felipe Alves da Louza:
Engineering augmented suffix sorting algorithms. University of Campinas, Brazil, 2017
Journal Articles
- 2022
- [j15]Lavinia Egidi, Felipe A. Louza
, Giovanni Manzini:
Space Efficient Merging of de Bruijn Graphs and Wheeler Graphs. Algorithmica 84(3): 639-669 (2022) - [j14]Daniel Saad Nogueira Nunes, Felipe A. Louza, Simon Gog, Mauricio Ayala-Rincón, Gonzalo Navarro:
Grammar Compression by Induced Suffix Sorting. ACM J. Exp. Algorithmics 27: 1.1:1-1.1:33 (2022) - 2021
- [j13]Felipe A. Louza, Neerja Mhaskar, W. F. Smyth:
A new approach to regular & indeterminate strings. Theor. Comput. Sci. 854: 105-115 (2021) - 2020
- [j12]Felipe A. Louza, Guilherme P. Telles, Simon Gog, Nicola Prezza, Giovanna Rosone:
gsufsort: constructing suffix arrays, LCP arrays and BWTs for string collections. Algorithms Mol. Biol. 15(1): 18 (2020) - [j11]Veronica Guerrini, Felipe A. Louza, Giovanna Rosone:
Metagenomic analysis through the extended Burrows-Wheeler transform. BMC Bioinform. 21-S(8): 299 (2020) - [j10]Felipe A. Louza:
A simple algorithm for computing the document array. Inf. Process. Lett. 154 (2020) - 2019
- [j9]Lavinia Egidi, Felipe A. Louza, Giovanni Manzini, Guilherme P. Telles:
External memory BWT and LCP computation for sequence collections with applications. Algorithms Mol. Biol. 14(1): 6:1-6:15 (2019) - [j8]Felipe A. Louza, Guilherme P. Telles, Simon Gog, Liang Zhao:
Algorithms to compute the Burrows-Wheeler Similarity Distribution. Theor. Comput. Sci. 782: 145-156 (2019) - 2018
- [j7]Felipe A. Louza, William F. Smyth, Giovanni Manzini, Guilherme P. Telles:
Lyndon array construction during Burrows-Wheeler inversion. J. Discrete Algorithms 50: 2-9 (2018) - 2017
- [j6]Felipe A. Louza, Guilherme P. Telles, Steve Hoffmann, Cristina Dutra de Aguiar Ciferri:
Generalized enhanced suffix array construction in external memory. Algorithms Mol. Biol. 12(1): 26:1-26:16 (2017) - [j5]Felipe A. Louza, Simon Gog, Guilherme P. Telles:
Optimal suffix sorting and LCP array construction for constant alphabets. Inf. Process. Lett. 118: 30-34 (2017) - [j4]Felipe A. Louza, Travis Gagie, Guilherme P. Telles:
Burrows-Wheeler transform and LCP array construction in constant space. J. Discrete Algorithms 42: 14-22 (2017) - [j3]Felipe A. Louza, Simon Gog, Guilherme P. Telles:
Inducing enhanced suffix arrays for string collections. Theor. Comput. Sci. 678: 22-39 (2017) - 2016
- [j2]William H. A. Tustumi, Simon Gog, Guilherme P. Telles, Felipe A. Louza:
An improved algorithm for the all-pairs suffix-prefix problem. J. Discrete Algorithms 37: 34-43 (2016) - 2012
- [j1]Daniel Yoshinobu Takada Chino, Felipe Alves Louza, Agma Juci Machado Traina, Cristina Dutra de Aguiar Ciferri, Caetano Traina Jr.:
Time Series Indexing Taking Advantage of the Generalized Suffix Tree. J. Inf. Data Manag. 3(2): 101-109 (2012)
Conference and Workshop Papers
- 2023
- [c15]Frederico R. Rosa, Felipe A. Louza, Humberto Luiz Razente:
Vetor de sufixos métrico compacto. SBBD 2023: 414-419 - 2022
- [c14]Veronica Guerrini, Felipe A. Louza, Giovanna Rosone:
Lossy Compressor Preserving Variant Calling through Extended BWT. BIOINFORMATICS 2022: 38-48 - [c13]Veronica Guerrini, Felipe A. Louza, Giovanna Rosone:
Parallel Lossy Compression for Large FASTQ Files. BIOSTEC (Selected Papers) 2022: 97-120 - [c12]Lucas P. Ramos, Felipe A. Louza, Guilherme P. Telles:
Genome Comparison on Succinct Colored de Bruijn Graphs. SPIRE 2022: 165-177 - 2019
- [c11]Felipe A. Louza, Sabrina Mantaci, Giovanni Manzini, Marinella Sciortino, Guilherme P. Telles:
Inducing the Lyndon Array. SPIRE 2019: 138-151 - [c10]Lavinia Egidi, Felipe A. Louza, Giovanni Manzini:
Space-Efficient Merging of Succinct de Bruijn Graphs. SPIRE 2019: 337-351 - 2018
- [c9]Daniel Saad Nogueira Nunes, Felipe A. Louza, Simon Gog, Mauricio Ayala-Rincón, Gonzalo Navarro:
A Grammar Compression Algorithm Based on Induced Suffix Sorting. DCC 2018: 42-51 - [c8]Felipe A. Louza, Guilherme P. Telles, Simon Gog, Liang Zhao:
Computing Burrows-Wheeler Similarity Distributions for String Collections. SPIRE 2018: 285-296 - [c7]Lavinia Egidi, Felipe A. Louza, Giovanni Manzini, Guilherme P. Telles:
External memory BWT and LCP computation for sequence collections with applications. WABI 2018: 10:1-10:14 - 2016
- [c6]Felipe A. Louza, Simon Gog, Guilherme P. Telles:
Induced Suffix Sorting for String Collections. DCC 2016: 43-52 - [c5]Felipe A. Louza, Simon Gog, Leandro Zanotto, Guido Araujo, Guilherme P. Telles:
Parallel Computation for the All-Pairs Suffix-Prefix Problem. SPIRE 2016: 122-132 - 2015
- [c4]Felipe A. Louza, Guilherme P. Telles:
Computing the BWT and the LCP Array in Constant Space. IWOCA 2015: 312-320 - 2013
- [c3]Felipe A. Louza, Guilherme P. Telles, Cristina Dutra de Aguiar Ciferri:
External Memory Generalized Suffix and LCP Arrays Construction. CPM 2013: 201-210 - 2011
- [c2]Daniel Yoshinobu Takada Chino, Felipe Alves Louza, Agma Juci Machado Traina, Cristina Dutra de Aguiar Ciferri, Caetano Traina Jr.:
Telesto: Indexação de Séries Temporais por Meio de Árvores de Sufixo Generalizadas. SBBD (Short Papers) 2011: 41-48 - [c1]Felipe Alves da Louza, Ricardo Rodrigues Ciferri, Cristina Dutra de Aguiar Ciferri:
Efficiently Querying Protein Sequences with the Proteinus Index. BSB 2011: 58-65
Informal and Other Publications
- 2023
- [i13]Veronica Guerrini, Felipe A. Louza, Giovanna Rosone:
Lossy Compressor preserving variant calling through Extended BWT. CoRR abs/2304.08534 (2023) - 2021
- [i12]Marcelo K. Albertini, Felipe A. Louza:
Practical evaluation of Lyndon factors via alphabet reordering. CoRR abs/2108.04988 (2021) - 2020
- [i11]Lavinia Egidi, Felipe A. Louza, Giovanni Manzini:
Space efficient merging of de Bruijn graphs and Wheeler graphs. CoRR abs/2009.03675 (2020) - [i10]Daniel Saad Nogueira Nunes, Felipe A. Louza, Simon Gog, Mauricio Ayala-Rincón, Gonzalo Navarro:
Grammar Compression By Induced Suffix Sorting. CoRR abs/2011.12898 (2020) - [i9]Felipe A. Louza, Neerja Mhaskar, W. F. Smyth:
A New Approach to Regular & Indeterminate Strings. CoRR abs/2012.07892 (2020) - 2019
- [i8]Lavinia Egidi, Felipe A. Louza, Giovanni Manzini:
Space-efficient merging of succinct de Bruijn graphs. CoRR abs/1902.02889 (2019) - [i7]Felipe A. Louza, Guilherme P. Telles, Simon Gog, Liang Zhao:
Algorithms to compute the Burrows-Wheeler Similarity Distribution. CoRR abs/1903.10583 (2019) - [i6]Felipe A. Louza, Sabrina Mantaci, Giovanni Manzini, Marinella Sciortino, Guilherme P. Telles:
Inducing the Lyndon Array. CoRR abs/1905.12987 (2019) - 2018
- [i5]Lavinia Egidi, Felipe A. Louza, Giovanni Manzini, Guilherme P. Telles:
External memory BWT and LCP computation for sequence collections with applications. CoRR abs/1805.06821 (2018) - [i4]Felipe A. Louza:
A Simple Algorithm for Computing the Document Array. CoRR abs/1812.09094 (2018) - 2017
- [i3]Felipe A. Louza, W. F. Smyth, Giovanni Manzini, Guilherme P. Telles:
Lyndon Array Construction during Burrows-Wheeler Inversion. CoRR abs/1710.10105 (2017) - [i2]Daniel Saad Nogueira Nunes, Felipe A. Louza, Simon Gog, Mauricio Ayala-Rincón, Gonzalo Navarro:
A Grammar Compression Algorithm based on Induced Suffix Sorting. CoRR abs/1711.03205 (2017) - 2016
- [i1]Felipe A. Louza, Travis Gagie, Guilherme P. Telles:
Burrows-Wheeler transform and LCP array construction in constant space. CoRR abs/1611.08198 (2016)
Coauthor Index
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