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2020 – today
- 2024
[j50]Mona Sharifi Sarabi, Samantha J. Ma, Kay Jann
, John M. Ringman, Danny J. J. Wang, Yonggang Shi:
Vessel density mapping of small cerebral vessels on 3D high resolution black blood MRI. NeuroImage 286: 120504 (2024)- [j49]Xinyu Nie, Jialiang Ruan, María Concepción García Otaduy, Lea Tenenholz Grinberg, John M. Ringman, Yonggang Shi:
Surface-Based Probabilistic Fiber Tracking in Superficial White Matter. IEEE Trans. Medical Imaging 43(3): 1113-1124 (2024) - [c84]Xinkai Wang, Yonggang Shi:
Adaptive Subtype and Stage Inference for Alzheimer's Disease. MICCAI (3) 2024: 46-55 - [c83]Yuan Li, Xinyu Nie, Jianwei Zhang, Yonggang Shi:
Surface-Based and Shape-Informed U-Fiber Atlasing for Robust Superficial White Matter Connectivity Analysis. MICCAI (2) 2024: 422-432 - [i3]Lujia Zhong, Shuo Huang, Jiaxin Yue, Jianwei Zhang, Zhiwei Deng, Wenhao Chi, Yonggang Shi:
TauAD: MRI-free Tau Anomaly Detection in PET Imaging via Conditioned Diffusion Models. CoRR abs/2405.13199 (2024) - [i2]Shuo Huang, Lujia Zhong, Yonggang Shi:
Diffusion Model-based FOD Restoration from High Distortion in dMRI. CoRR abs/2406.13209 (2024) - [i1]Lujia Zhong, Shuo Huang, Yonggang Shi:
ssProp: Energy-Efficient Training for Convolutional Neural Networks with Scheduled Sparse Back Propagation. CoRR abs/2408.12561 (2024) - 2023
- [c82]Mingyang Xia, Yonggang Shi:
A Groupwise Method for the Reconstruction of Hypergraph Representation of Resting-State Functional Networks. MTSAIL/LEAF/AI4Treat/MMMI/REMIA@MICCAI 2023: 14-23 - [c81]Xinyu Nie, Yonggang Shi:
Flow-Based Geometric Interpolation of Fiber Orientation Distribution Functions. MICCAI (8) 2023: 46-55 - [c80]Jianwei Zhang, Yonggang Shi:
Personalized Patch-Based Normality Assessment of Brain Atrophy in Alzheimer's Disease. MICCAI (5) 2023: 55-62 - [c79]Shuo Huang, Lujia Zhong, Yonggang Shi:
Automated Mapping of Residual Distortion Severity in Diffusion MRI. CDMRI@MICCAI 2023: 58-69 - [c78]Yuan Li, Xinyu Nie, Yao Fu, Yonggang Shi:
FASSt: Filtering via Symmetric Autoencoder for Spherical Superficial White Matter Tractography. CDMRI@MICCAI 2023: 129-139 - [c77]Jiaxin Yue, Yonggang Shi:
Uncovering Heterogeneity in Alzheimer's Disease from Graphical Modeling of the Tau Spatiotemporal Topography. MICCAI (5) 2023: 262-271 - [c76]Zhiwei Deng, Songnan Xu, Jianwei Zhang, Jiong Zhang, Danny J. J. Wang, Lirong Yan, Yonggang Shi:
Shape-Aware 3D Small Vessel Segmentation with Local Contrast Guided Attention. MICCAI (4) 2023: 354-363 - 2022
- [j48]Shai Porat, Francesca Sibilia, Josephine Yoon, Yonggang Shi, Martin J. Dahl, Markus Werkle-Bergner, Sandra Düzel, Nils Christian Bodammer, Ulman Lindenberger, Simone Kühn, Mara Mather:
Age differences in diffusivity in the locus coeruleus and its ascending noradrenergic tract. NeuroImage 251: 119022 (2022) - [j47]Huseyin O. Taskin, Yuchuan Qiao, Valerie J. Sydnor, Matthew Cieslak, Edda B. Haggerty, Theodore D. Satterthwaite, Jessica I. W. Morgan, Yonggang Shi, Geoffrey Karl Aguirre:
Retinal ganglion cell endowment is correlated with optic tract fiber cross section, not density. NeuroImage 260: 119495 (2022) - [j46]Yuchuan Qiao, Yonggang Shi:
Unsupervised Deep Learning for FOD-Based Susceptibility Distortion Correction in Diffusion MRI. IEEE Trans. Medical Imaging 41(5): 1165-1175 (2022) - [c75]Yihao Xia, Yonggang Shi:
Personalized dMRI Harmonization on Cortical Surface. MICCAI (6) 2022: 717-725 - 2021
- [j45]Ben A. Duffy, Lu Zhao, Farshid Sepehrband, Joyce Min, Danny J. J. Wang, Yonggang Shi, Arthur W. Toga, Hosung Kim:
Retrospective motion artifact correction of structural MRI images using deep learning improves the quality of cortical surface reconstructions. NeuroImage 230: 117756 (2021) - [j44]Kurt G. Schilling, François Rheault, Laurent Petit, Colin B. Hansen, Vishwesh Nath, Fang-Cheng Yeh, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Elda Fischi Gomez, Marco Pizzolato, Mario Ocampo-Pineda, Simona Schiavi, Erick Jorge Canales-Rodríguez, Alessandro Daducci, Cristina Granziera, Giorgio M. Innocenti, Jean-Philippe Thiran, Laura Mancini, Stephen J. Wastling, Sirio Cocozza, Maria Petracca, Giuseppe Pontillo, Matteo Mancini, Sjoerd B. Vos, Vejay N. Vakharia, John S. Duncan, Helena Melero, Lidia Manzanedo, Emilio Sanz-Morales, Ángel Peña-Melián, Fernando Calamante, Arnaud Attye, Ryan P. Cabeen, Laura Korobova, Arthur W. Toga, Anupa Ambili Vijayakumari, Drew Parker, Ragini Verma, Ahmed M. Radwan, Stefan Sunaert, Louise Emsell, Alberto De Luca, Alexander Leemans, Claude J. Bajada, Hamied A. Haroon, Hojjatollah Azadbakht, Maxime Chamberland, Sila Genc, Chantal M. W. Tax, Ping Hong Yeh, Rujirutana Srikanchana, Colin D. Mcknight, Joseph Yuan-Mou Yang, Jian Chen, Claire E. Kelly, Chun-Hung Yeh, Jérôme Cochereau, Jerome J. Maller, Thomas Welton, Fabien Almairac, Kiran K. Seunarine, Chris A. Clark, Fan Zhang, Nikos Makris, Alexandra J. Golby, Yogesh Rathi, Lauren J. O'Donnell, Yihao Xia, Dogu Baran Aydogan, Yonggang Shi, Francisco Guerreiro Fernandes, Mathijs Raemaekers, Shaun Warrington, Stijn Michielse, Alonso Ramirez-Manzanares, Luis Concha, Ramón Aranda, Mariano Rivera Meraz, Garikoitz Lerma-Usabiaga, Lucas Roitman, Lucius S. Fekonja, Navona Calarco, Michael Joseph, Hajer Nakua, Aristotle N. Voineskos, Philippe Karan, Gabrielle Grenier, Jon Haitz Legarreta, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Andrew L. Alexander, Koji Kamagata, Yuya Saito, Wataru Uchida, Christina Andica, Masahiro Abe, Roza G. Bayrak, Claudia A. M. Gandini Wheeler-Kingshott, Egidio D'Angelo, Fulvia Palesi, Giovanni Savini, Nicolò Rolandi, Pamela Guevara, Josselin Houenou, Narciso López-López, Jean-François Mangin, Cyril Poupon, Claudio Román, Andrea Vázquez, Chiara Maffei, Mavilde Arantes, José Paulo Andrade, Susana Maria Silva, Vince D. Calhoun, Eduardo Caverzasi, Simone Sacco, Michael Lauricella, Franco Pestilli, Daniel Bullock, Yang Zhan, Edith Brignoni-Pérez, Catherine Lebel, Jess E Reynolds, Igor Nestrasil, René Labounek, Christophe Lenglet, Amy Paulson, Stefania Aulicka, Sarah R. Heilbronner, Katja Heuer, Bramsh Qamar Chandio, Javier Guaje, Wei Tang, Eleftherios Garyfallidis, Rajikha Raja, Adam W. Anderson, Bennett A. Landman, Maxime Descoteaux:
Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? NeuroImage 243: 118502 (2021) - [j43]Dogu Baran Aydogan, Yonggang Shi:
Parallel Transport Tractography. IEEE Trans. Medical Imaging 40(2): 635-647 (2021) - [c74]Yonggang Shi:
Application of Random Simulation Algorithm in Physical Education Teaching Evaluation. CSIA (2) 2021: 696-703 - [c73]Zhiwei Deng, Jiong Zhang, Yonggang Shi:
Dynamic Sub-graph Learning for Patch-Based Cortical Folding Classification. MLCN@MICCAI 2021: 53-62 - [c72]Jiong Zhang, Yonggang Shi:
Personalized Matching and Analysis of Cortical Folding Patterns via Patch-Based Intrinsic Brain Mapping. MICCAI (7) 2021: 710-720 - 2020
- [j42]Feifei Xu, Xinting Ge, Yonggang Shi, Zhonghe Zhang, Yuchun Tang, Xiangtao Lin, Gaojun Teng, Fengchao Zang, Nuonan Gao, Haihong Liu, Arthur W. Toga, Shuwei Liu:
Morphometric development of the human fetal cerebellum during the early second trimester. NeuroImage 207 (2020) - [j41]Yihao Xia, Yonggang Shi:
Groupwise track filtering via iterative message passing and pruning. NeuroImage 221: 117147 (2020) - [j40]Wei Sun, Yuchun Tang, Yuchuan Qiao, Xinting Ge, Mara Mather, John M. Ringman, Yonggang Shi:
A probabilistic atlas of locus coeruleus pathways to transentorhinal cortex for connectome imaging in Alzheimer's disease. NeuroImage 223: 117301 (2020) - [j39]Mona Sharifi Sarabi, Maziyar M. Khansari, Jiong Zhang, Sam Kushner-Lenhoff, Jin-Kyu Gahm, Yuchuan Qiao, Amir H. Kashani, Yonggang Shi:
3D Retinal Vessel Density Mapping With OCT-Angiography. IEEE J. Biomed. Health Informatics 24(12): 3466-3479 (2020) - [j38]Maziyar M. Khansari, Jiong Zhang, Yuchuan Qiao, Jin-Kyu Gahm, Mona Sharifi Sarabi, Amir H. Kashani, Yonggang Shi:
Automated Deformation-Based Analysis of 3D Optical Coherence Tomography in Diabetic Retinopathy. IEEE Trans. Medical Imaging 39(1): 236-245 (2020) - [j37]Jiong Zhang, Yuchuan Qiao, Mona Sharifi Sarabi, Maziyar M. Khansari, Jin-Kyu Gahm, Amir H. Kashani, Yonggang Shi:
3D Shape Modeling and Analysis of Retinal Microvasculature in OCT-Angiography Images. IEEE Trans. Medical Imaging 39(5): 1335-1346 (2020) - [j36]Yitian Zhao, Jiong Zhang, Ella Pereira, Yalin Zheng, Pan Su, Jianyang Xie, Yifan Zhao, Yonggang Shi, Hong Qi, Jiang Liu, Yonghuai Liu:
Automated Tortuosity Analysis of Nerve Fibers in Corneal Confocal Microscopy. IEEE Trans. Medical Imaging 39(9): 2725-2737 (2020) - [j35]Yitian Zhao, Jiong Zhang, Ella Pereira, Yalin Zheng, Pan Su, Jianyang Xie, Yifan Zhao, Yonggang Shi, Hong Qi, Jiang Liu, Yonghuai Liu:
Corrections to "Automated Tortuosity Analysis of Nerve Fibers in Corneal Confocal Microscopy". IEEE Trans. Medical Imaging 39(11): 3758 (2020) - [c71]Yuchuan Qiao, Yonggang Shi:
Unsupervised Deep Learning for Susceptibility Distortion Correction in Connectome Imaging. MICCAI (7) 2020: 302-310
2010 – 2019
- 2019
- [j34]Kurt G. Schilling, Vishwesh Nath, Colin B. Hansen, Prasanna Parvathaneni, Justin A. Blaber, Yurui Gao, Peter Neher, Dogu Baran Aydogan, Yonggang Shi, Mario Ocampo-Pineda, Simona Schiavi, Alessandro Daducci, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, David Romascano, Gaëtan Rensonnet, Marco Pizzolato, Bennett A. Landman:
Limits to anatomical accuracy of diffusion tractography using modern approaches. NeuroImage 185: 1-11 (2019) - [j33]Samantha J. Ma, Mona Sharifi Sarabi, Lirong Yan, Xingfeng Shao, Yue Chen, Qi Yang, Kay Jann, Arthur W. Toga, Yonggang Shi, Danny J. J. Wang:
Characterization of lenticulostriate arteries with high resolution black-blood T1-weighted turbo spin echo with variable flip angles at 3 and 7 Tesla. NeuroImage 199: 184-193 (2019) - [j32]Yuchuan Qiao, Wei Sun, Yonggang Shi:
FOD-based registration for susceptibility distortion correction in brainstem connectome imaging. NeuroImage 202 (2019) - [c70]Junyan Wang, Yonggang Shi:
A Fast Fiber k-Nearest-Neighbor Algorithm with Application to Group-Wise White Matter Topography Analysis. IPMI 2019: 332-344 - [c69]Jiong Zhang, Amir H. Kashani, Yonggang Shi:
3D Surface-Based Geometric and Topological Quantification of Retinal Microvasculature in OCT-Angiography via Reeb Analysis. MICCAI (1) 2019: 57-65 - [c68]Jin-Kyu Gahm, Yonggang Shi:
Surface-Based Tracking of U-Fibers in the Superficial White Matter. MICCAI (3) 2019: 538-546 - [c67]Xinyu Nie, Yonggang Shi:
Topographic Filtering of Tractograms as Vector Field Flows. MICCAI (3) 2019: 564-572 - 2018
- [j31]Fengqian Pang, Heng Li, Yonggang Shi, Zhiwen Liu:
Computational Analysis of Cell Dynamics in Videos with Hierarchical-Pooled Deep-Convolutional Features. J. Comput. Biol. 25(8): 934-953 (2018) - [j30]Jin-Kyu Gahm, Yonggang Shi:
Riemannian metric optimization on surfaces (RMOS) for intrinsic brain mapping in the Laplace-Beltrami embedding space. Medical Image Anal. 46: 189-201 (2018) - [j29]Junning Li, Jin-Kyu Gahm, Yonggang Shi, Arthur W. Toga:
Topological false discovery rates for brain mapping based on signal height. NeuroImage 167: 478-487 (2018) - [j28]Yuchun Tang, Wei Sun, Arthur W. Toga, John M. Ringman, Yonggang Shi:
A probabilistic atlas of human brainstem pathways based on connectome imaging data. NeuroImage 169: 227-239 (2018) - [j27]Dogu Baran Aydogan, Yonggang Shi:
Tracking and validation techniques for topographically organized tractography. NeuroImage 181: 64-84 (2018) - [j26]Junyan Wang, Dogu Baran Aydogan, Rohit Varma, Arthur W. Toga, Yonggang Shi:
Modeling topographic regularity in structural brain connectivity with application to tractogram filtering. NeuroImage 183: 87-98 (2018) - [j25]Jiong Zhang, Erik J. Bekkers, Da Chen, Tos T. J. M. Berendschot, Jan Schouten, Josien P. W. Pluim, Yonggang Shi, Behdad Dashtbozorg, Bart M. ter Haar Romeny:
Reconnection of Interrupted Curvilinear Structures via Cortically Inspired Completion for Ophthalmologic Images. IEEE Trans. Biomed. Eng. 65(5): 1151-1165 (2018) - [c66]Yuchuan Qiao, Wei Sun, Yonggang Shi:
FOD-Based Registration for Susceptibility Distortion Correction in Connectome Imaging. CNI@MICCAI 2018: 11-19 - [c65]Junyan Wang, Yonggang Shi:
GIFE: Efficient and Robust Group-Wise Isometric Fiber Embedding. CNI@MICCAI 2018: 20-28 - [c64]Jin-Kyu Gahm, Yuchun Tang, Yonggang Shi:
Patch-Based Mapping of Transentorhinal Cortex with a Distributed Atlas. MICCAI (3) 2018: 689-697 - 2017
- [j24]Xinjian Chen, Shuo Li, Emanuele Trucco, Jimmy Jiang Liu, Yonggang Shi, Beiji Zou:
Preface. Comput. Medical Imaging Graph. 55: 1 (2017) - [c63]Heng Li, Zhiwen Liu, Fengqian Pang, Yonggang Shi:
Characterization of single cell dynamic morphology by local deformation pattern modeling. EMBC 2017: 329-332 - [c62]Heng Li, Zhiwen Liu, Fengqian Pang, Yonggang Shi:
Cell dynamic morphology analysis by deep convolutional features. EMBC 2017: 2700-2703 - [c61]Junyan Wang, Dogu Baran Aydogan, Rohit Varma, Arthur W. Toga, Yonggang Shi:
Topographic Regularity for Tract Filtering in Brain Connectivity. IPMI 2017: 263-274 - [c60]Jin-Kyu Gahm, Yonggang Shi:
Holistic Mapping of Striatum Surfaces in the Laplace-Beltrami Embedding Space. MICCAI (1) 2017: 21-30 - [c59]Wei Sun, Junling Li, Yonggang Shi:
A Whole-Brain Reconstruction Approach for FOD Modeling from Multi-Shell Diffusion MRI. CNI@MICCAI 2017: 152-160 - [c58]Junyan Wang, Yonggang Shi:
Kernel-Regularized ICA for Computing Functional Topography from Resting-State fMRI. MICCAI (1) 2017: 373-381 - [c57]Wei Sun, Lilyana Amezcua, Yonggang Shi:
FOD Restoration for Enhanced Mapping of White Matter Lesion Connectivity. MICCAI (1) 2017: 584-592 - 2016
- [j23]Yonggang Shi, Jishuang Tan, Zhiwen Liu:
基于图割和水平集的肾脏医学图像分割 (Renal Cortex Segmentation Using Graph Cuts and Level Sets). 计算机科学 43(7): 290-293 (2016) - [j22]Alexandra Kammen, Meng Law, Bosco S. Tjan, Arthur W. Toga, Yonggang Shi:
Automated retinofugal visual pathway reconstruction with multi-shell HARDI and FOD-based analysis. NeuroImage 125: 767-779 (2016) - [j21]Junning Li, Yonggang Shi, Arthur W. Toga:
Mapping Brain Anatomical Connectivity Using Diffusion Magnetic Resonance Imaging: Structural connectivity of the human brain. IEEE Signal Process. Mag. 33(3): 36-51 (2016) - [j20]Junning Li, Yonggang Shi, Arthur W. Toga:
Transformation Invariant Control of Voxel-Wise False Discovery Rate. IEEE Trans. Medical Imaging 35(10): 2243-2257 (2016) - [c56]Dogu Baran Aydogan, Yonggang Shi:
Probabilistic Tractography for Topographically Organized Connectomes. MICCAI (1) 2016: 201-209 - [c55]Jin-Kyu Gahm, Yonggang Shi:
Riemannian Metric Optimization for Connectivity-Driven Surface Mapping. MICCAI (1) 2016: 228-236 - 2015
- [j19]Yali Huang, Zhiwen Liu, Yonggang Shi:
Quantitative analysis of live lymphocytes morphology and intracellular motion in microscopic images. Biomed. Signal Process. Control. 18: 195-203 (2015) - [j18]Xinting Ge, Yonggang Shi, Junning Li, Zhonghe Zhang, Xiangtao Lin, Jinfeng Zhan, Haitao Ge, Junhai Xu, Qiaowen Yu, Yuan Leng, Gaojun Teng, Lei Feng, Haiwei Meng, Yuchun Tang, Fengchao Zang, Arthur W. Toga, Shuwei Liu:
Development of the human fetal hippocampal formation during early second trimester. NeuroImage 119: 33-43 (2015) - [j17]Heng Li, Zhiwen Liu, Yali Huang, Yonggang Shi:
Quaternion generic Fourier descriptor for color object recognition. Pattern Recognit. 48(12): 3895-3903 (2015) - [j16]Giang Tran, Yonggang Shi:
Fiber Orientation and Compartment Parameter Estimation From Multi-Shell Diffusion Imaging. IEEE Trans. Medical Imaging 34(11): 2320-2332 (2015) - [c54]Heng Li, Zhiwen Liu, Fengqian Pang, Zhiyi Fan, Yonggang Shi:
Analyzing dynamic cellular morphology in time-lapsed images enabled by cellular deformation pattern recognition. EMBC 2015: 7478-7481 - [c53]Fengqian Pang, Zhiwen Liu, Heng Li, Yonggang Shi:
The measurement of cell viability based on temporal bag of words for image sequences. ICIP 2015: 4185-4189 - [c52]Junning Li, Yonggang Shi, Arthur W. Toga:
Controlling False Discovery Rate in Signal Space for Transformation-Invariant Thresholding of Statistical Maps. IPMI 2015: 125-136 - [c51]Yan Jin, Yonggang Shi, Liang Zhan, Paul M. Thompson:
Automated multi-atlas labeling of the fornix and its integrity in alzheimer's disease. ISBI 2015: 140-143 - [c50]Dogu Baran Aydogan, Yonggang Shi:
Track Filtering via Iterative Correction of TDI Topology. MICCAI (1) 2015: 20-27 - 2014
- [j15]Yan Jin, Yonggang Shi, Liang Zhan, Boris A. Gutman, Greig I. de Zubicaray, Katie L. McMahon, Margaret J. Wright, Arthur W. Toga, Paul M. Thompson:
Automatic clustering of white matter fibers in brain diffusion MRI with an application to genetics. NeuroImage 100: 75-90 (2014) - [j14]Junning Li, Yonggang Shi, Giang Tran, Ivo D. Dinov, Danny J. J. Wang, Arthur W. Toga:
Fast Local Trust Region Technique for Diffusion Tensor Registration Using Exact Reorientation and Regularization. IEEE Trans. Medical Imaging 33(5): 1005-1022 (2014) - [j13]Yonggang Shi, Rongjie Lai, Danny J. J. Wang, Daniel Pelletier, David C. Mohr, Nancy L. Sicotte, Arthur W. Toga:
Metric Optimization for Surface Analysis in the Laplace-Beltrami Embedding Space. IEEE Trans. Medical Imaging 33(7): 1447-1463 (2014) - [c49]Heng Li, Zhiwen Liu, Xing An, Yonggang Shi:
Multi-classification of cell deformation based on object alignment and run length statistic. EMBC 2014: 3378-3381 - [c48]Junning Li, Yonggang Shi, Arthur W. Toga:
Rotational gradient field for interpolation of fiber orientation distribution in connectivity analysis. ISBI 2014: 1051-1054 - [c47]Junning Li, Yonggang Shi, Arthur W. Toga:
Diffusion of Fiber Orientation Distribution Functions with a Rotation-Induced Riemannian Metric. MICCAI (3) 2014: 249-256 - [c46]Yonggang Shi, Junning Li, Arthur W. Toga:
Persistent Reeb Graph Matching for Fast Brain Search. MLMI 2014: 306-313 - 2013
- [j12]Jinfeng Zhan, Ivo D. Dinov, Junning Li, Zhonghe Zhang, Sam Hobel, Yonggang Shi, Xiangtao Lin, Alen Zamanyan, Lei Feng, Gaojun Teng, Fang Fang, Yuchun Tang, Fengchao Zang, Arthur W. Toga, Shuwei Liu:
Spatial-temporal atlas of human fetal brain development during the early second trimester. NeuroImage 82: 115-126 (2013) - [j11]Yonggang Shi, Rongjie Lai, Arthur W. Toga:
Cortical Surface Reconstruction via Unified Reeb Analysis of Geometric and Topological Outliers in Magnetic Resonance Images. IEEE Trans. Medical Imaging 32(3): 511-530 (2013) - [c45]Yali Huang, Zhiwen Liu, Yonggang Shi, Ning Li, Xing An, Xiaoming Gou:
Quantitative Analysis of Lymphocytes Morphology and Motion in Intravital Microscopic Images. EMBC 2013: 3686-3689 - [c44]Yonggang Shi, Rongjie Lai, Arthur W. Toga:
Conformal Mapping via Metric Optimization with Application for Cortical Label Fusion. IPMI 2013: 244-255 - [c43]Yan Jin, Yonggang Shi, Liang Zhan, Greig I. de Zubicaray, Katie McMahon, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson:
Labeling white matter tracts in hardi by fusing multiple tract atlases with applications to genetics. ISBI 2013: 512-515 - [c42]Junning Li, Yonggang Shi, Ivo D. Dinov, Arthur W. Toga:
Locally Weighted Multi-atlas Construction. MBIA 2013: 1-8 - [c41]Giang Tran, Yonggang Shi:
Adaptively Constrained Convex Optimization for Accurate Fiber Orientation Estimation with High Order Spherical Harmonics. MICCAI (3) 2013: 485-492 - [c40]Junning Li, Yan Jin, Yonggang Shi, Ivo D. Dinov, Danny J. J. Wang, Arthur W. Toga, Paul M. Thompson:
Voxelwise Spectral Diffusional Connectivity and Its Applications to Alzheimer's Disease and Intelligence Prediction. MICCAI (1) 2013: 655-662 - 2012
- [c39]Junning Li, Yonggang Shi, Giang Tran, Ivo D. Dinov, Danny J. J. Wang, Arthur W. Toga:
Fast Diffusion Tensor Registration with Exact Reorientation and Regularization. MICCAI (2) 2012: 138-145 - [c38]Yan Jin, Yonggang Shi, Liang Zhan, Junning Li, Greig I. de Zubicaray, Katie McMahon, Nicholas G. Martin, Margaret J. Wright, Paul M. Thompson:
Automatic Population HARDI White Matter Tract Clustering by Label Fusion of Multiple Tract Atlases. MBIA 2012: 147-156 - [c37]Xing An, Zhiwen Liu, Yonggang Shi, Ning Li, Yalin Wang, Shantanu H. Joshi:
Modeling Dynamic Cellular Morphology in Images. MICCAI (1) 2012: 340-347 - [c36]Yonggang Shi, Rongjie Lai, Arthur W. Toga:
Unified Geometry and Topology Correction for Cortical Surface Reconstruction with Intrinsic Reeb Analysis. MICCAI (1) 2012: 601-608 - 2011
- [j10]Sergi G. Costafreda, Ivo D. Dinov, Zhuowen Tu, Yonggang Shi, Cheng-Yi Liu, Iwona Kloszewska, Patrizia Mecocci, Hilkka Soininen, Magda Tsolaki, Bruno Vellas, Lars-Olof Wahlund, Christian Spenger, Arthur W. Toga, Simon Lovestone, Andrew Simmons:
Automated hippocampal shape analysis predicts the onset of dementia in mild cognitive impairment. NeuroImage 56(1): 212-219 (2011) - [c35]Ying Li, Yonggang Shi, Fa Jie, Zhiwen Liu, Yong Yuan:
Multi-modal diffeomorphic demons registration based on mutual information. BMEI 2011: 800-804 - [c34]Rongjie Lai, Yonggang Shi, Nancy L. Sicotte, Arthur W. Toga:
Automated corpus callosum extraction via Laplace-Beltrami nodal parcellation and intrinsic geodesic curvature flows on surfaces. ICCV 2011: 2034-2040 - [c33]Yonggang Shi, Rongjie Lai, Arthur W. Toga:
CoRPORATE: Cortical Reconstruction by Pruning Outliers with Reeb Analysis and Topology-Preserving Evolution. IPMI 2011: 233-244 - [c32]Yan Jin, Yonggang Shi, Neda Jahanshad, Iman Aganj, Guillermo Sapiro, Arthur W. Toga, Paul M. Thompson:
3D elastic registration improves HARDI-derived fiber alignment and automated tract clustering. ISBI 2011: 822-826 - [c31]Vishal Patel, Yonggang Shi, Paul M. Thompson, Arthur W. Toga:
K-SVD for HARDI denoising. ISBI 2011: 1805-1808 - [c30]Yan Jin, Yonggang Shi, Shantanu H. Joshi, Neda Jahanshad, Liang Zhan, Greig I. de Zubicaray, Katie McMahon, Nicholas G. Martin, Margaret J. Wright, Arthur W. Toga, Paul M. Thompson:
Heritability of White Matter Fiber Tract Shapes: A HARDI Study of 198 Twins. MBIA 2011: 35-43 - [c29]Yonggang Shi, Rongjie Lai, Raja Gill, Daniel Pelletier, David C. Mohr, Nancy L. Sicotte, Arthur W. Toga:
Conformal Metric Optimization on Surface (CMOS) for Deformation and Mapping in Laplace-Beltrami Embedding Space. MICCAI (2) 2011: 327-334 - 2010
- [j9]Xiuwen Liu, Yonggang Shi, Ivo D. Dinov, Washington Mio:
A Computational Model of Multidimensional Shape. Int. J. Comput. Vis. 89(1): 69-83 (2010) - [j8]Vishal Patel, Yonggang Shi, Paul M. Thompson, Arthur W. Toga:
Mesh-based spherical deconvolution: A flexible approach to reconstruction of non-negative fiber orientation distributions. NeuroImage 51(3): 1071-1081 (2010) - [j7]Yonggang Shi, Rongjie Lai, Jonathan H. Morra, Ivo D. Dinov, Paul M. Thompson, Arthur W. Toga:
Robust Surface Reconstruction via Laplace-Beltrami Eigen-Projection and Boundary Deformation. IEEE Trans. Medical Imaging 29(12): 2009-2022 (2010) - [c28]Rongjie Lai, Yonggang Shi, Kevin Scheibel, Scott C. Fears, Roger P. Woods, Arthur W. Toga, Tony F. Chan:
Metric-induced optimal embedding for intrinsic 3D shape analysis. CVPR 2010: 2871-2878 - [c27]Xinyang Liu, Xiuwen Liu, Yonggang Shi, Paul M. Thompson, Washington Mio:
A Model of Volumetric Shape for the Analysis of Longitudinal Alzheimer's Disease Data. ECCV (3) 2010: 594-606 - [c26]Xiuwen Liu, Yonggang Shi, Ying Wang, Paul M. Thompson, Washington Mio:
A Riemannian model of regional degeneration of the hippocampus in Alzheimer's disease. ISBI 2010: 237-240 - [c25]Yonggang Shi, Bo Sun, Rongjie Lai, Ivo D. Dinov, Arthur W. Toga:
Automated Sulci Identification via Intrinsic Modeling of Cortical Anatomy. MICCAI (3) 2010: 49-56
2000 – 2009
- 2009
- [j6]Natasha Leporé, Yonggang Shi, Franco Lepore, Madeleine Fortin, Patrice Voss, Yi-Yu Chou, Catherine Lord, Maryse Lassonde, Ivo D. Dinov, Arthur W. Toga, Paul M. Thompson:
Pattern of hippocampal shape and volume differences in blind subjects. NeuroImage 46(4): 949-957 (2009) - [j5]Yonggang Shi, Zhuowen Tu, Allan L. Reiss, Rebecca A. Dutton, Agatha D. Lee, Albert M. Galaburda, Ivo D. Dinov, Paul M. Thompson, Arthur W. Toga:
Joint Sulcal Detection on Cortical Surfaces With Graphical Models and Boosted Priors. IEEE Trans. Medical Imaging 28(3): 361-373 (2009) - [c24]Xing An, Zhiwen Liu, Chuanfeng Lv, Yonggang Shi:
A Method of Quantitative Analysis for Dynamic Cellular Morphological Change. BMEI 2009: 1-4 - [c23]Yonggang Shi, Jonathan H. Morra, Paul M. Thompson, Arthur W. Toga:
Inverse-Consistent Surface Mapping with Laplace-Beltrami Eigen-Features. IPMI 2009: 467-478 - [c22]Vishal Patel, Yonggang Shi, Paul M. Thompson, Arthur W. Toga:
Mesh-Based Spherical Deconvolution for Physically Valid Fiber Orientation Reconstruction from Diffusion-Weighted MRI. ISBI 2009: 614-617 - [c21]Rongjie Lai, Yonggang Shi, Ivo D. Dinov, Tony F. Chan, Arthur W. Toga:
Laplace-Beltrami Nodal Counts: A New Signature for 3D Shape Analysis. ISBI 2009: 694-697 - [c20]Xinyang Liu, Yonggang Shi, Jonathan H. Morra, Xiuwen Liu, Paul M. Thompson, Washington Mio:
Mapping Hippocampal Atrophy with a Multi-Scale Model of Shape. ISBI 2009: 879-882 - [c19]Bin Dong, Yu Mao, Ivo D. Dinov, Zhuowen Tu, Yonggang Shi, Yalin Wang, Arthur W. Toga:
Wavelet-Based Representation of Biological Shapes. ISVC (1) 2009: 955-964 - [c18]Yonggang Shi, Ivo D. Dinov, Arthur W. Toga:
Cortical Shape Analysis in the Laplace-Beltrami Feature Space. MICCAI (1) 2009: 208-215 - 2008
- [j4]Yonggang Shi, William Clement Karl:
A Real-Time Algorithm for the Approximation of Level-Set-Based Curve Evolution. IEEE Trans. Image Process. 17(5): 645-656 (2008) - [j3]Yonggang Shi, Paul M. Thompson, Ivo D. Dinov, Arthur W. Toga:
Hamilton-Jacobi Skeleton on Cortical Surfaces. IEEE Trans. Medical Imaging 27(5): 664-673 (2008) - [c17]Yonggang Shi, Rongjie Lai, Sheila Krishna, Nancy L. Sicotte, Ivo D. Dinov, Arthur W. Toga:
Anisotropic Laplace-Beltrami eigenmaps: Bridging Reeb graphs and skeletons. CVPR Workshops 2008: 1-7 - [c16]Yonggang Shi, Rongjie Lai, Kyle C. Kern, Nancy L. Sicotte, Ivo D. Dinov, Arthur W. Toga:
Harmonic Surface Mapping with Laplace-Beltrami Eigenmaps. MICCAI (2) 2008: 147-154 - [c15]Xinyang Liu, Washington Mio, Yonggang Shi, Ivo D. Dinov, Xiuwen Liu, Natasha Leporé, Franco Lepore, Madeleine Fortin, Patrice Voss, Maryse Lassonde, Paul M. Thompson:
Models of Normal Variation and Local Contrasts in Hippocampal Anatomy. MICCAI (2) 2008: 407-415 - 2007
- [j2]Yonggang Shi, Paul M. Thompson, Ivo D. Dinov, Stanley J. Osher, Arthur W. Toga:
Direct cortical mapping via solving partial differential equations on implicit surfaces. Medical Image Anal. 11(3): 207-223 (2007) - [j1]Yonggang Shi, Paul M. Thompson, Greig I. de Zubicaray, Stephen E. Rose, Zhuowen Tu, Ivo D. Dinov, Arthur W. Toga:
Direct mapping of hippocampal surfaces with intrinsic shape context. NeuroImage 37(3): 792-807 (2007) - [c14]Yonggang Shi, Zhuowen Tu, Allan L. Reiss, Rebecca A. Dutton, Agatha D. Lee, Albert M. Galaburda, Ivo D. Dinov, Paul M. Thompson, Arthur W. Toga:
Joint Sulci Detection Using Graphical Models and Boosted Priors. IPMI 2007: 98-109 - [c13]Yonggang Shi, Allan L. Reiss, Agatha D. Lee, Rebecca A. Dutton, Ursula Bellugi, Albert M. Galaburda, Julie R. Korenberg, Debra L. Mills, Ivo D. Dinov, Paul M. Thompson, Arthur W. Toga:
Hamilton-Jacobi Skeletons on Cortical Surfaces with Applications in Characterizing the Gyrification Pattern Inwilliams Syndrome. ISBI 2007: 660-663 - 2005
- [c12]Hong Shen, Yonggang Shi, Zhigang Peng:
Applying Prior Knowledge in the Segmentation of 3D Complex Anatomic Structures. CVBIA 2005: 189-199 - [c11]Yonggang Shi, William Clement Karl:
Real-Time Tracking Using Level Sets. CVPR (2) 2005: 34-41 - [c10]Yonggang Shi, William Clement Karl:
A Fast Level Set Method Without Solving PDEs. ICASSP (2) 2005: 97-100 - 2004
- [c9]Yonggang Shi, William Clement Karl:
Shape reconstruction from unorganized points with a data-driven level set method. ICASSP (3) 2004: 13-16 - [c8]Venkatesh Saligrama, Yonggang Shi, William Clement Karl:
Performance guarantees in sensor networks. ICASSP (2) 2004: 269-272 - [c7]Yonggang Shi, William Clement Karl:
Level Set Methods for Dynamic Tomography. ISBI 2004: 620-623 - [c6]Yonggang Shi, William Clement Karl:
Differentiable Minimin Shape Distance For Incorporating Topological Priors in Biomedical Imaging. ISBI 2004: 1247-1254 - [c5]Yonggang Shi, Janusz Konrad, William Clement Karl:
Multiple motion and occlusion segmentation with a multiphase level set method. VCIP 2004 - 2003
- [c4]Yonggang Shi, William Clement Karl:
Tomographic reconstruction of dynamic objects. Computational Imaging 2003: 151-160 - [c3]Yonggang Shi, William Clement Karl, David A. Castañón:
Curve evolution methods for dynamic tomography with unknown dynamic models. Medical Imaging: Image Processing 2003 - 2002
- [c2]Yonggang Shi, William Clement Karl:
Dynamic tomography with curve evolution methods. ICASSP 2002: 3229-3232 - [c1]Yonggang Shi, William Clement Karl, David A. Castañón:
Dynamic tomography using curve evolution with spatial-temporal regularization. ICIP (2) 2002: 629-632
Coauthor Index
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