
Alexandra J. Golby
Person information
- affiliation: Harvard Medical School, Boston, Department of Neurosurgery
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2020 – today
- 2020
- [j18]Sarah F. Frisken
, Ma Luo, Parikshit Juvekar
, Adomas Bunevicius
, Inês Machado, Prashin Unadkat, Melina M. Bertotti, Matthew Toews, William M. Wells III, Michael I. Miga, Alexandra J. Golby:
A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection. Int. J. Comput. Assist. Radiol. Surg. 15(1): 75-85 (2020) - [j17]Fan Zhang, Suheyla Cetin Karayumak, Nico Hoffmann, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell
:
Deep white matter analysis (DeepWMA): Fast and consistent tractography segmentation. Medical Image Anal. 65: 101761 (2020) - [j16]Fan Zhang, Guoqiang Xie, Laura Leung
, Michael A. Mooney, Lorenz Epprecht, Isaiah Norton, Yogesh Rathi, Ron Kikinis, Ossama Al-Mefty, Nikos Makris, Alexandra J. Golby, Lauren J. O'Donnell:
Creation of a novel trigeminal tractography atlas for automated trigeminal nerve identification. NeuroImage 220: 117063 (2020) - [c28]Jie Luo, Sarah F. Frisken, Duo Wang, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
Are Registration Uncertainty and Error Monotonically Associated? MICCAI (3) 2020: 264-274 - [c27]Nazim Haouchine, Parikshit Juvekar, William M. Wells III, Stephane Cotin, Alexandra J. Golby, Sarah F. Frisken:
Deformation Aware Augmented Reality for Craniotomy Using 3D/2D Non-rigid Registration of Cortical Vessels. MICCAI (4) 2020: 735-744 - [c26]Soumya Ghose, David Mills, Jhimli Mitra, L. Scott Smith, Desmond Teck-Beng Yeo, Alexandra J. Golby, Sarah F. Frisken, Thomas K. Foo:
Automatic brain structure-guided registration of pre and intra-operative 3D ultrasound for neurosurgery. Medical Imaging: Image-Guided Procedures 2020: 113150J - [c25]Nazim Haouchine, Parikshit Juvekar
, Alexandra J. Golby, William M. Wells III, Stephane Cotin, Sarah F. Frisken:
Alignment of cortical vessels viewed through the surgical microscope with preoperative imaging to compensate for brain shift. Medical Imaging: Image-Guided Procedures 2020: 113151V - [i5]Jie Luo, Guangshen Ma, Sarah F. Frisken, Parikshit Juvekar, Nazim Haouchine, Zhe Xu, Yiming Xiao, Alexandra J. Golby, Patrick J. Codd, Masashi Sugiyama, William M. Wells III:
Do Public Datasets Assure Unbiased Comparisons for Registration Evaluation? CoRR abs/2003.09483 (2020)
2010 – 2019
- 2019
- [j15]Inês Machado, Matthew Toews, Elizabeth George, Prashin Unadkat, Walid Essayed, Jie Luo, Pedro Teodoro, Herculano Carvalho, Jorge Martins
, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William M. Wells III, Yangming Ou:
Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data. NeuroImage 202 (2019) - [c24]Jie Luo, Alireza Sedghi, Karteek Popuri, Dana Cobzas, Miaomiao Zhang, Frank Preiswerk, Matthew Toews, Alexandra J. Golby, Masashi Sugiyama
, William M. Wells III, Sarah F. Frisken:
On the Applicability of Registration Uncertainty. MICCAI (2) 2019: 410-419 - [c23]Fan Zhang, Nico Hoffmann, Suheyla Cetin Karayumak, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell:
Deep White Matter Analysis: Fast, Consistent Tractography Segmentation Across Populations and dMRI Acquisitions. MICCAI (3) 2019: 599-608 - [c22]Ma Luo, Sarah F. Frisken, Saramati Narasimhan, Logan W. Clements, Reid Carleton Thompson, Alexandra J. Golby, Michael I. Miga:
A comprehensive model-assisted brain shift correction approach in image-guided neurosurgery: a case study in brain swelling and subsequent sag after craniotomy. Medical Imaging: Image-Guided Procedures 2019: 1095105 - [c21]Sarah F. Frisken, Ma Luo, Inês Machado, Prashin Unadkat, Parikshit Juvekar
, Adomas Bunevicius
, Matthew Toews, William M. Wells III, Michael I. Miga
, Alexandra J. Golby:
Preliminary results comparing thin-plate splines with finite element methods for modeling brain deformation during neurosurgery using intraoperative ultrasound. Medical Imaging: Image-Guided Procedures 2019: 1095120 - [i4]Jie Luo, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III, Sarah F. Frisken:
Pilot Study on Verifying the Monotonic Relationship between Error and Uncertainty in Deformable Registration for Neurosurgery. CoRR abs/1908.07709 (2019) - 2018
- [j14]Inês Machado
, Matthew Toews, Jie Luo, Prashin Unadkat, Walid Essayed
, Elizabeth George, Pedro Teodoro, Herculano Carvalho, Jorge Martins
, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William Wells:
Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching. Int. J. Comput. Assist. Radiol. Surg. 13(10): 1525-1538 (2018) - [j13]Jie Luo, Sarah F. Frisken, Inês Machado, Miaomiao Zhang, Steve Pieper, Polina Golland, Matthew Toews, Prashin Unadkat, Alireza Sedghi, Haoyin Zhou, Alireza Mehrtash
, Frank Preiswerk, Cheng-Chieh Cheng, Alexandra J. Golby, Masashi Sugiyama
, William M. Wells III:
Using the variogram for vector outlier screening: application to feature-based image registration. Int. J. Comput. Assist. Radiol. Surg. 13(12): 1871-1880 (2018) - [c20]Jie Luo, Matthew Toews, Inês Machado, Sarah F. Frisken, Miaomiao Zhang, Frank Preiswerk, Alireza Sedghi, Hongyi Ding, Steve Pieper, Polina Golland, Alexandra J. Golby, Masashi Sugiyama
, William M. Wells III:
A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation. MICCAI (4) 2018: 30-38 - [c19]Inês Machado, Matthew Toews, Jie Luo, Prashin Unadkat, Walid Essayed, Elizabeth George, Pedro Teodoro, Herculano Carvalho, Jorge Martins
, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William M. Wells III, Yangming Ou:
Deformable MRI-Ultrasound Registration via Attribute Matching and Mutual-Saliency Weighting for Image-Guided Neurosurgery. POCUS/BIVPCS/CuRIOUS/CPM@MICCAI 2018: 165-171 - [i3]Jie Luo, Sarah F. Frisken, Karteek Popuri, Dana Cobzas, Frank Preiswerk, Matthew Toews, Miaomiao Zhang, Hongyi Ding, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
On the Ambiguity of Registration Uncertainty. CoRR abs/1803.05266 (2018) - [i2]Jie Luo, Matthew Toews, Inês Machado, Sarah F. Frisken, Miaomiao Zhang, Frank Preiswerk, Alireza Sedghi, Hongyi Ding, Steve Pieper, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation. CoRR abs/1803.07682 (2018) - 2017
- [c18]Fan Zhang, Pegah Kahali, Yannick Suter
, Isaiah Norton, Laura Rigolo, Peter Savadjiev, Yang Song, Yogesh Rathi, Tom Weidong Cai, William M. Wells III, Alexandra J. Golby, Lauren J. O'Donnell:
Automated connectivity-based groupwise cortical atlas generation: Application to data of neurosurgical patients with brain tumors for cortical parcellation prediction. ISBI 2017: 774-777 - [c17]Ma Luo, Sarah F. Frisken, Jared A. Weis, Logan W. Clements, Prashin Unadkat, Reid Carleton Thompson, Alexandra J. Golby, Michael I. Miga:
Validation of model-based brain shift correction in neurosurgery via intraoperative magnetic resonance imaging: preliminary results. Medical Imaging: Image-Guided Procedures 2017: 1013503 - 2016
- [j12]Zhenrui Chen, Yanmei Tie, Olutayo I. Olubiyi
, Fan Zhang, Alireza Mehrtash
, Laura Rigolo, Pegah Kahali, Isaiah Norton, Ofer Pasternak, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell:
Corticospinal tract modeling for neurosurgical planning by tracking through regions of peritumoral edema and crossing fibers using two-tensor unscented Kalman filter tractography. Int. J. Comput. Assist. Radiol. Surg. 11(8): 1475-1486 (2016) - 2014
- [j11]Georg Langs
, Andrew Sweet, Danial Lashkari, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland:
Decoupling function and anatomy in atlases of functional connectivity patterns: Language mapping in tumor patients. NeuroImage 103: 462-475 (2014) - 2013
- [j10]Petter Risholm, Firdaus Janoos, Isaiah Norton, Alexandra J. Golby, William M. Wells III:
Bayesian characterization of uncertainty in intra-subject non-rigid registration. Medical Image Anal. 17(5): 538-555 (2013) - [j9]Lauren J. O'Donnell
, Alexandra J. Golby, Carl-Fredrik Westin:
Fiber clustering versus the parcellation-based connectome. NeuroImage 80: 283-289 (2013) - [c16]Matthew Toews, Alexandra J. Golby, William M. Wells III:
Inter-slice Correspondence for 2D Ultrasound-Guided Procedures. CLIP 2013: 143-150 - [i1]Jan Egger, Tina Kapur, Andriy Fedorov, Steve Pieper, James V. Miller, Harini Veeraraghavan, Bernd Freisleben, Alexandra J. Golby, Christopher Nimsky, Ron Kikinis:
GBM Volumetry using the 3D Slicer Medical Image Computing Platform. CoRR abs/1303.0964 (2013) - 2012
- [j8]Lauren J. O'Donnell
, Laura Rigolo, Isaiah Norton, William M. Wells III, Carl-Fredrik Westin, Alexandra J. Golby:
fMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts. NeuroImage 60(1): 456-470 (2012) - [c15]Lauren J. O'Donnell, William M. Wells III, Alexandra J. Golby, Carl-Fredrik Westin:
Unbiased Groupwise Registration of White Matter Tractography. MICCAI (3) 2012: 123-130 - 2011
- [c14]Georg Langs
, Danial Lashkari, Andrew Sweet, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland:
Learning an Atlas of a Cognitive Process in Its Functional Geometry. IPMI 2011: 135-146 - 2010
- [j7]Claus Reinsberger, Naoaki Tanaka, Andrew J. Cole, Jong Woo Lee, Barbara A. Dworetzky
, Edward Bromfield, Lorie Hamiwka, Blaise F. Bourgeois, Alexandra J. Golby, Joseph R. Madsen, Steven M. Stufflebeam:
Current dipole orientation and distribution of epileptiform activity correlates with cortical thinning in left mesiotemporal epilepsy. NeuroImage 52(4): 1238-1242 (2010) - [c13]Lauren J. O'Donnell, Carl-Fredrik Westin, Isaiah Norton, Stephen Whalen, Laura Rigolo, Ruth E. Propper, Alexandra J. Golby:
The Fiber Laterality Histogram: A New Way to Measure White Matter Asymmetry. MICCAI (2) 2010: 225-232 - [c12]Georg Langs, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland:
Functional Geometry Alignment and Localization of Brain Areas. NIPS 2010: 1225-1233
2000 – 2009
- 2009
- [j6]Lauren J. O'Donnell
, Carl-Fredrik Westin, Alexandra J. Golby:
Tract-based morphometry for white matter group analysis. NeuroImage 45(3): 832-844 (2009) - 2008
- [j5]Yanmei Tie, Stephen Whalen, Ralph O. Suarez, Alexandra J. Golby:
Group independent component analysis of language fMRI from word generation tasks. NeuroImage 42(3): 1214-1225 (2008) - [c11]Arish A. Qazi, Gordon L. Kindlmann, Lauren O'Donnell, Sharon Peled, Alireza Radmanesh, Stephen Whalen, Alexandra J. Golby, Carl-Fredrik Westin:
Two-tensor streamline tractography through white matter intra-voxel fiber crossings: Assessed by fMRI. CVPR Workshops 2008: 1-8 - [c10]Julien Dauguet, Simon K. Warfield
, Edward Bromfield, Alexandra J. Golby, Jong Woo Lee:
Comparison of the deformations of brain tissues caused by tumor in seizure and non-seizure patients. ISBI 2008: 1143-1146 - [c9]Clare B. Poynton, Mark Jenkinson, Stephen Whalen, Alexandra J. Golby, William M. Wells III:
Fieldmap-Free Retrospective Registration and Distortion Correction for EPI-Based Functional Imaging. MICCAI (2) 2008: 271-279 - 2007
- [j4]Neculai Archip, Olivier Clatz, Stephen Whalen, Daniel F. Kacher, Andriy Fedorov, Andriy Kot, Nikos Chrisochoides, Ferenc A. Jolesz, Alexandra J. Golby, Peter M. Black, Simon K. Warfield
:
Non-rigid alignment of pre-operative MRI, fMRI, and DT-MRI with intra-operative MRI for enhanced visualization and navigation in image-guided neurosurgery. NeuroImage 35(2): 609-624 (2007) - [c8]Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Daniel Goldberg-Zimring, Daniel F. Kacher, Stephen Whalen, Ron Kikinis, Ferenc A. Jolesz, Olivier Clatz, Simon K. Warfield, Peter M. Black, Alexandra J. Golby:
Grid-Enabled Software Environment for Enhanced Dynamic Data-Driven Visualization and Navigation During Image-Guided Neurosurgery. International Conference on Computational Science (1) 2007: 980-987 - [c7]Lauren O'Donnell
, Carl-Fredrik Westin, Alexandra J. Golby:
Tract-Based Morphometry. MICCAI (2) 2007: 161-168 - 2006
- [j3]Daniel M. Branco, Ralph O. Suarez, Stephen Whalen, James P. O'Shea, Aaron P. Nelson, Jaderson C. da Costa
, Alexandra J. Golby:
Functional MRI of memory in the hippocampus: Laterality indices may be more meaningful if calculated from whole voxel distributions. NeuroImage 32(2): 592-602 (2006) - [c6]James P. O'Shea, William M. Wells III, Alexandra J. Golby:
Using surface normals to localize subdural intracranial electrodes placed during neurosurgery. ISBI 2006: 331-334 - [c5]Neculai Archip, Andriy Fedorov, Bryn Lloyd, Nikos Chrisochoides, Alexandra J. Golby, Peter M. Black, Simon K. Warfield
:
Integration of patient specific modeling and advanced image processing techniques for image-guided neurosurgery. Medical Imaging: Image-Guided Procedures 2006: 61411E - [c4]Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Peter M. Black, Olivier Clatz, Alexandra J. Golby, Ron Kikinis, Simon K. Warfield
:
Imaging and visual analysis - Toward real-time image guided neurosurgery using distributed and grid computing. SC 2006: 76 - 2005
- [j2]Simon K. Warfield
, Steven Haker, Ion-Florin Talos, Corey Kemper, Neil I. Weisenfeld, Andrea J. U. Mewes, Daniel Goldberg-Zimring, Kelly H. Zou, Carl-Fredrik Westin, William M. Wells III, Clare M. Tempany, Alexandra J. Golby, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis:
Capturing intraoperative deformations: research experience at Brigham and Women's hospital. Medical Image Anal. 9(2): 145-162 (2005) - [j1]Olivier Clatz, Hervé Delingette, Ion-Florin Talos, Alexandra J. Golby, Ron Kikinis, Ferenc A. Jolesz, Nicholas Ayache, Simon K. Warfield
:
Robust nonrigid registration to capture brain shift from intraoperative MRI. IEEE Trans. Medical Imaging 24(11): 1417-1427 (2005) - [c3]Olivier Clatz, Hervé Delingette, Ion-Florin Talos, Alexandra J. Golby, Ron Kikinis, Ferenc A. Jolesz, Nicholas Ayache, Simon K. Warfield
:
Hybrid Formulation of the Model-Based Non-rigid Registration Problem to Improve Accuracy and Robustness. MICCAI (2) 2005: 295-302 - 2004
- [c2]Corey Kemper, Ion-Florin Talos, Alexandra J. Golby, Peter M. Black, Ron Kikinis, W. Eric L. Grimson, Simon K. Warfield:
An Anisotropic Material Model for Image Guided Neurosurgery. MICCAI (2) 2004: 267-275 - 2003
- [c1]Ion-Florin Talos, Lauren O'Donnell, Carl-Fredrik Westin, Simon K. Warfield, William M. Wells III, Seung-Schik Yoo, Lawrence P. Panych, Alexandra J. Golby, Hatsuho Mamata, Stefan S. Maier, Peter Ratiu, Charles R. G. Guttmann, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis:
Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image-Guided Neurosurgery. MICCAI (1) 2003: 407-415
Coauthor Index

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