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ORCIDAlexandra J. Golby
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- affiliation: Harvard Medical School, Boston, Department of Neurosurgery
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2020 – today
- 2025
[c41]Yui Lo, Yuqian Chen, Dongnan Liu, Jon Haitz Legarreta, Leo R. Zekelman, Fan Zhang, Jarrett Rushmore, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Tom Weidong Cai, Lauren J. O'Donnell:
TractShapeNet: Efficient Multi-Shape Learning with 3D Tractography Point Clouds. ISBI 2025: 1-5- [i22]Yui Lo, Yuqian Chen, Dongnan Liu, Leo R. Zekelman, Jarrett Rushmore, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Fan Zhang, Tom Weidong Cai, Lauren J. O'Donnell:
A Multimodal Deep Learning Approach for White Matter Shape Prediction in Diffusion MRI Tractography. CoRR abs/2504.18400 (2025) - 2024
- [j36]Sarah F. Frisken
, Nazim Haouchine, D. D. Chlorogiannis, Vivek Gopalakrishnan, Alexandre Cafaro, William M. Wells III, Alexandra J. Golby, R. Du:
VESCL: an open source 2D vessel contouring library. Int. J. Comput. Assist. Radiol. Surg. 19(8): 1627-1636 (2024) - [j35]Yuqian Chen, Leo R. Zekelman, Chaoyi Zhang, Tengfei Xue, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
TractGeoNet: A geometric deep learning framework for pointwise analysis of tract microstructure to predict language assessment performance. Medical Image Anal. 94: 103120 (2024) - [j34]Nathan McDannold, Yongzhi Zhang, Stecia-Marie P. Fletcher, Patrick Y. Wen, David A. Reardon, Alexandra J. Golby, Margaret S. Livingstone:
Non-Invasive Blood-Brain Barrier Disruption Using Acoustic Holography With a Clinical Focused Ultrasound System. IEEE Trans. Biomed. Eng. 71(10): 3046-3054 (2024) - [c40]Hassan Rasheed, Reuben Dorent, Maximilian Fehrentz, Tina Kapur, William M. Wells III, Alexandra J. Golby, Sarah F. Frisken, Julia A. Schnabel, Nazim Haouchine:
Learning to Match 2D Keypoints Across Preoperative MR and Intraoperative Ultrasound. ASMUS@MICCAI 2024: 78-87 - [c39]Yui Lo, Yuqian Chen, Dongnan Liu, Wan Liu, Leo R. Zekelman, Fan Zhang, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell:
Cross-Domain Fiber Cluster Shape Analysis for Language Performance Cognitive Score Prediction. CDMRI@MICCAI 2024: 84-94 - [c38]Maximilian Fehrentz, Mohammad Farid Azampour, Reuben Dorent, Hassan Rasheed, Colin Galvin, Alexandra J. Golby, William M. Wells III, Sarah F. Frisken, Nassir Navab, Nazim Haouchine:
Intraoperative Registration by Cross-Modal Inverse Neural Rendering. MICCAI (6) 2024: 317-327 - [c37]Reuben Dorent, Erickson Torio, Nazim Haouchine, Colin Galvin, Sarah F. Frisken, Alexandra J. Golby, Tina Kapur, William M. Wells III:
Patient-Specific Real-Time Segmentation in Trackerless Brain Ultrasound. MICCAI (6) 2024: 477-487 - [i21]Kathleen Baur, Xin Xiong, Erickson Torio, Rose Du, Parikshit Juvekar, Reuben Dorent, Alexandra J. Golby, Sarah F. Frisken, Nazim Haouchine:
Spatiotemporal Disentanglement of Arteriovenous Malformations in Digital Subtraction Angiography. CoRR abs/2402.09636 (2024) - [i20]Yui Lo, Yuqian Chen, Dongnan Liu, Wan Liu, Leo R. Zekelman, Fan Zhang, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell:
Cross-domain Fiber Cluster Shape Analysis for Language Performance Cognitive Score Prediction. CoRR abs/2403.19001 (2024) - [i19]Reuben Dorent, Erickson Torio, Nazim Haouchine, Colin Galvin, Sarah F. Frisken, Alexandra J. Golby, Tina Kapur, William M. Wells III:
Patient-Specific Real-Time Segmentation in Trackerless Brain Ultrasound. CoRR abs/2405.09959 (2024) - [i18]Hassan Rasheed, Reuben Dorent, Maximilian Fehrentz, Tina Kapur, William M. Wells III, Alexandra J. Golby, Sarah F. Frisken, Julia A. Schnabel, Nazim Haouchine:
Learning to Match 2D Keypoints Across Preoperative MR and Intraoperative Ultrasound. CoRR abs/2409.08169 (2024) - [i17]Maximilian Fehrentz, Mohammad Farid Azampour, Reuben Dorent, Hassan Rasheed, Colin Galvin, Alexandra J. Golby, William M. Wells III, Sarah F. Frisken, Nassir Navab, Nazim Haouchine:
Intraoperative Registration by Cross-Modal Inverse Neural Rendering. CoRR abs/2409.11983 (2024) - [i16]Yui Lo, Yuqian Chen, Dongnan Liu, Wan Liu, Leo R. Zekelman, Jarrett Rushmore, Fan Zhang, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell:
The shape of the brain's connections is predictive of cognitive performance: an explainable machine learning study. CoRR abs/2410.15108 (2024) - [i15]Reuben Dorent, Nazim Haouchine, Alexandra J. Golby, Sarah F. Frisken, Tina Kapur, William M. Wells III:
Unified Cross-Modal Image Synthesis with Hierarchical Mixture of Product-of-Experts. CoRR abs/2410.19378 (2024) - [i14]Yui Lo, Yuqian Chen, Dongnan Liu, Jon Haitz Legarreta, Leo R. Zekelman, Fan Zhang, Jarrett Rushmore, Yogesh Rathi, Nikos Makris, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell:
TractShapeNet: Efficient Multi-Shape Learning with 3D Tractography Point Clouds. CoRR abs/2410.22099 (2024) - 2023
- [j33]Saima Safdar, Benjamin F. Zwick, Yue Yu, George C. Bourantas, Grand R. Joldes, Simon K. Warfield, Damon E. Hyde, Sarah F. Frisken, Tina Kapur, Ron Kikinis, Alexandra J. Golby, Arya Nabavi, Adam Wittek, Karol Miller:
SlicerCBM: automatic framework for biomechanical analysis of the brain. Int. J. Comput. Assist. Radiol. Surg. 18(10): 1925-1940 (2023) - [j32]Fryderyk Victor Kögl, Étienne Léger, Nazim Haouchine, Erickson Torio, Parikshit Juvekar, Nassir Navab, Tina Kapur, Steve Pieper, Alexandra J. Golby, Sarah F. Frisken:
A tool-free neuronavigation method based on single-view hand tracking. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 11(4): 1307-1315 (2023) - [j31]Nikos Chrisochoides, Yixun Liu, Fotis Drakopoulos, Andriy Kot, Panagiotis A. Foteinos, Christos Tsolakis, Emmanuel Billias, Olivier Clatz, Nicholas Ayache, Andrey Fedorov, Alexandra J. Golby, Peter M. Black, Ron Kikinis:
Comparison of physics-based deformable registration methods for image-guided neurosurgery. Frontiers Digit. Health 5 (2023) - [j30]Tengfei Xue, Fan Zhang, Chaoyi Zhang, Yuqian Chen, Yang Song, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell:
Superficial white matter analysis: An efficient point-cloud-based deep learning framework with supervised contrastive learning for consistent tractography parcellation across populations and dMRI acquisitions. Medical Image Anal. 85: 102759 (2023) - [j29]Matthew A. Haber, Giorgio Pietro Biondetti, Romane Gauriau, Donnella S. Comeau, John K. Chin, Bernardo C. Bizzo, Julia Strout, Alexandra J. Golby, Katherine P. Andriole:
Detection of idiopathic normal pressure hydrocephalus on head CT using a deep convolutional neural network. Neural Comput. Appl. 35(13): 9907-9915 (2023) - [j28]Ruben T. Lucassen, Mohammad H. Jafari, Nicole M. Duggan, Nick Jowkar, Alireza Mehrtash, Chanel E. Fischetti, Denie Bernier, Kira Prentice, Erik P. Duhaime, Mike Jin, Purang Abolmaesumi, Friso G. Heslinga, Mitko Veta, Maria Alejandra Duran Mendicuti, Sarah F. Frisken, Paul B. Shyn, Alexandra J. Golby, Edward W. Boyer, William M. Wells III, Andrew J. Goldsmith, Tina Kapur:
Deep Learning for Detection and Localization of B-Lines in Lung Ultrasound. IEEE J. Biomed. Health Informatics 27(9): 4352-4361 (2023) - [c36]Sipei Li, Jianzhong He, Tengfei Xue, Guoqiang Xie, Shun Yao, Yuqian Chen, Erickson F. Torio, Yuanjing Feng, Dhiego Chaves de Almeida Bastos, Yogesh Rathi, Nikos Makris, Ron Kikinis, Wenya Linda Bi, Alexandra J. Golby, Lauren J. O'Donnell, Fan Zhang:
DEEPRGVP: A novel microstructure-informed supervised contrastive learning framework for automated identification of the retinogeniculate pathway using dMRI tractography. ISBI 2023: 1-5 - [c35]Nazim Haouchine, Reuben Dorent, Parikshit Juvekar, Erickson Torio, William M. Wells III, Tina Kapur, Alexandra J. Golby, Sarah F. Frisken:
Learning Expected Appearances for Intraoperative Registration During Neurosurgery. MICCAI (9) 2023: 227-237 - [c34]Tengfei Xue, Yuqian Chen, Chaoyi Zhang, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
TractCloud: Registration-Free Tractography Parcellation with a Novel Local-Global Streamline Point Cloud Representation. MICCAI (8) 2023: 409-419 - [c33]Reuben Dorent, Nazim Haouchine, Fryderyk Victor Kögl, Samuel Joutard, Parikshit Juvekar, Erickson Torio, Alexandra J. Golby, Sébastien Ourselin, Sarah F. Frisken, Tom Vercauteren, Tina Kapur, William M. Wells III:
Unified Brain MR-Ultrasound Synthesis Using Multi-modal Hierarchical Representations. MICCAI (10) 2023: 448-458 - [i13]Jianzhong He, Fan Zhang, Yiang Pan, Yuanjing Feng, Jarrett Rushmore, Erickson Torio, Yogesh Rathi, Nikos Makris, Ron Kikinis, Alexandra J. Golby, Lauren J. O'Donnell:
Reconstructing the somatotopic organization of the corticospinal tract remains a challenge for modern tractography methods. CoRR abs/2306.05623 (2023) - [i12]Yuqian Chen, Leo R. Zekelman, Chaoyi Zhang, Tengfei Xue, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
TractGeoNet: A geometric deep learning framework for pointwise analysis of tract microstructure to predict language assessment performance. CoRR abs/2307.03982 (2023) - [i11]Tengfei Xue, Yuqian Chen, Chaoyi Zhang, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Fan Zhang, Lauren J. O'Donnell:
TractCloud: Registration-free tractography parcellation with a novel local-global streamline point cloud representation. CoRR abs/2307.09000 (2023) - [i10]Reuben Dorent, Nazim Haouchine, Fryderyk Victor Kögl, Samuel Joutard, Parikshit Juvekar, Erickson Torio, Alexandra J. Golby, Sébastien Ourselin, Sarah F. Frisken, Tom Vercauteren, Tina Kapur, William M. Wells III:
Unified Brain MR-Ultrasound Synthesis using Multi-Modal Hierarchical Representations. CoRR abs/2309.08747 (2023) - [i9]Nazim Haouchine, Reuben Dorent, Parikshit Juvekar, Erickson Torio, William M. Wells III, Tina Kapur, Alexandra J. Golby, Sarah F. Frisken:
Learning Expected Appearances for Intraoperative Registration during Neurosurgery. CoRR abs/2310.01735 (2023) - 2022
- [j27]Étienne Léger, Samantha Horvath, Jean-Christophe Fillion-Robin, David Allemang, Samuel Gerber, Parikshit Juvekar, Erickson Torio, Tina Kapur, Steve Pieper, Sonia Pujol, Ryan S. Bardsley, Sarah F. Frisken, Alexandra J. Golby:
NousNav: A low-cost neuronavigation system for deployment in lower-resource settings. Int. J. Comput. Assist. Radiol. Surg. 17(9): 1745-1750 (2022) - [j26]Yue Yu, Saima Safdar, George C. Bourantas, Benjamin Zwick, Grand R. Joldes, Tina Kapur, Sarah F. Frisken, Ron Kikinis, Arya Nabavi, Alexandra J. Golby, Adam Wittek, Karol Miller:
Automatic framework for patient-specific modelling of tumour resection-induced brain shift. Comput. Biol. Medicine 143: 105271 (2022) - [j25]Sarah F. Frisken, Nazim Haouchine, Rose Du, Alexandra J. Golby:
Using temporal and structural data to reconstruct 3D cerebral vasculature from a pair of 2D digital subtraction angiography sequences. Comput. Medical Imaging Graph. 99: 102076 (2022) - [j24]Leo R. Zekelman, Fan Zhang, Nikos Makris, Jianzhong He, Yuqian Chen, Tengfei Xue, Daniela Liera, Daniel L. Drane, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell:
White matter association tracts underlying language and theory of mind: An investigation of 809 brains from the Human Connectome Project. NeuroImage 246: 118739 (2022) - [j23]Nazim Haouchine, Parikshit Juvekar, Michael Nercessian, William M. Wells III, Alexandra J. Golby, Sarah F. Frisken:
Pose Estimation and Non-Rigid Registration for Augmented Reality During Neurosurgery. IEEE Trans. Biomed. Eng. 69(4): 1310-1317 (2022) - [c32]Yuqian Chen, Fan Zhang, Chaoyi Zhang, Tengfei Xue, Leo R. Zekelman, Jianzhong He, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Weidong Cai, Lauren J. O'Donnell:
White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning. MICCAI (1) 2022: 174-184 - [i8]Yuqian Chen, Fan Zhang, Chaoyi Zhang, Tengfei Xue, Leo R. Zekelman, Jianzhong He, Yang Song, Nikos Makris, Yogesh Rathi, Alexandra J. Golby, Tom Weidong Cai, Lauren J. O'Donnell:
White Matter Tracts are Point Clouds: Neuropsychological Score Prediction and Critical Region Localization via Geometric Deep Learning. CoRR abs/2207.02402 (2022) - [i7]Tengfei Xue, Fan Zhang, Chaoyi Zhang, Yuqian Chen, Yang Song, Alexandra J. Golby, Nikos Makris, Yogesh Rathi, Weidong Cai, Lauren J. O'Donnell:
Superficial White Matter Analysis: An Efficient Point-cloud-based Deep Learning Framework with Supervised Contrastive Learning for Consistent Tractography Parcellation across Populations and dMRI Acquisitions. CoRR abs/2207.08975 (2022) - [i6]Sipei Li, Jianzhong He, Tengfei Xue, Guoqiang Xie, Shun Yao, Yuqian Chen, Erickson F. Torio, Yuanjing Feng, Dhiego Chaves de Almeida Bastos, Yogesh Rathi, Nikos Makris, Ron Kikinis, Wenya Linda Bi, Alexandra J. Golby, Lauren J. O'Donnell, Fan Zhang:
DeepRGVP: A Novel Microstructure-Informed Supervised Contrastive Learning Framework for Automated Identification Of The Retinogeniculate Pathway Using dMRI Tractography. CoRR abs/2211.08119 (2022) - 2021
- [j22]Nazim Haouchine, Parikshit Juvekar, Alexandra J. Golby, Sarah F. Frisken:
Predicted microscopic cortical brain images for optimal craniotomy positioning and visualisation. Comput. methods Biomech. Biomed. Eng. Imaging Vis. 9(4): 407-413 (2021) - [j21]Kurt G. Schilling, François Rheault, Laurent Petit, Colin B. Hansen, Vishwesh Nath, Fang-Cheng Yeh, Gabriel Girard, Muhamed Barakovic, Jonathan Rafael-Patino, Thomas Yu, Elda Fischi Gomez, Marco Pizzolato, Mario Ocampo-Pineda, Simona Schiavi, Erick Jorge Canales-Rodríguez, Alessandro Daducci, Cristina Granziera, Giorgio M. Innocenti, Jean-Philippe Thiran, Laura Mancini, Stephen J. Wastling, Sirio Cocozza, Maria Petracca, Giuseppe Pontillo, Matteo Mancini, Sjoerd B. Vos, Vejay N. Vakharia, John S. Duncan, Helena Melero, Lidia Manzanedo, Emilio Sanz-Morales, Ángel Peña-Melián, Fernando Calamante, Arnaud Attye, Ryan P. Cabeen, Laura Korobova, Arthur W. Toga, Anupa Ambili Vijayakumari, Drew Parker, Ragini Verma, Ahmed M. Radwan, Stefan Sunaert, Louise Emsell, Alberto De Luca, Alexander Leemans, Claude J. Bajada, Hamied A. Haroon, Hojjatollah Azadbakht, Maxime Chamberland, Sila Genc, Chantal M. W. Tax, Ping Hong Yeh, Rujirutana Srikanchana, Colin D. Mcknight, Joseph Yuan-Mou Yang, Jian Chen, Claire E. Kelly, Chun-Hung Yeh, Jérôme Cochereau, Jerome J. Maller, Thomas Welton, Fabien Almairac, Kiran K. Seunarine, Chris A. Clark, Fan Zhang, Nikos Makris, Alexandra J. Golby, Yogesh Rathi, Lauren J. O'Donnell, Yihao Xia, Dogu Baran Aydogan, Yonggang Shi, Francisco Guerreiro Fernandes, Mathijs Raemaekers, Shaun Warrington, Stijn Michielse, Alonso Ramirez-Manzanares, Luis Concha, Ramón Aranda, Mariano Rivera Meraz, Garikoitz Lerma-Usabiaga, Lucas Roitman, Lucius S. Fekonja, Navona Calarco, Michael Joseph, Hajer Nakua, Aristotle N. Voineskos, Philippe Karan, Gabrielle Grenier, Jon Haitz Legarreta, Nagesh Adluru, Veena A. Nair, Vivek Prabhakaran, Andrew L. Alexander, Koji Kamagata, Yuya Saito, Wataru Uchida, Christina Andica, Masahiro Abe, Roza G. Bayrak, Claudia A. M. Gandini Wheeler-Kingshott, Egidio D'Angelo, Fulvia Palesi, Giovanni Savini, Nicolò Rolandi, Pamela Guevara, Josselin Houenou, Narciso López-López, Jean-François Mangin, Cyril Poupon, Claudio Román, Andrea Vázquez, Chiara Maffei, Mavilde Arantes, José Paulo Andrade, Susana Maria Silva, Vince D. Calhoun, Eduardo Caverzasi, Simone Sacco, Michael Lauricella, Franco Pestilli, Daniel Bullock, Yang Zhan, Edith Brignoni-Pérez, Catherine Lebel, Jess E. Reynolds, Igor Nestrasil, René Labounek, Christophe Lenglet, Amy Paulson, Stefania Aulicka, Sarah R. Heilbronner, Katja Heuer, Bramsh Qamar Chandio, Javier Guaje, Wei Tang, Eleftherios Garyfallidis, Rajikha Raja, Adam W. Anderson, Bennett A. Landman, Maxime Descoteaux:
Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset? NeuroImage 243: 118502 (2021) - [j20]Fang-Cheng Yeh, Andrei Irimia, Dhiego Chaves de Almeida Bastos, Alexandra J. Golby:
Tractography methods and findings in brain tumors and traumatic brain injury. NeuroImage 245: 118651 (2021) - [c31]Michael Nercessian, Nazim Haouchine, Parikshit Juvekar, Sarah F. Frisken, Alexandra J. Golby:
Deep Cortical Vessel Segmentation Driven By Data Augmentation With Neural Image Analogy. ISBI 2021: 721-724 - [c30]Nazim Haouchine, Parikshit Juvekar, Xin Xiong, Jie Luo, Tina Kapur, Rose Du, Alexandra J. Golby, Sarah F. Frisken:
Estimation of High Framerate Digital Subtraction Angiography Sequences at Low Radiation Dose. MICCAI (6) 2021: 171-180 - [c29]Sarah F. Frisken, Parikshit Juvekar, Wenya Linda Bi, Alexandra J. Golby:
Mapping the progression of resection continuously during brain tumor surgery. Image-Guided Procedures 2021 - 2020
- [j19]Sarah F. Frisken, Ma Luo, Parikshit Juvekar, Adomas Bunevicius, Inês Machado, Prashin Unadkat, Melina M. Bertotti, Matthew Toews, William M. Wells III, Michael I. Miga, Alexandra J. Golby:
A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection. Int. J. Comput. Assist. Radiol. Surg. 15(1): 75-85 (2020) - [j18]Fotis Drakopoulos, Christos Tsolakis, Angelos Angelopoulos, Yixun Liu, Chengjun Yao, Kyriaki Rafailia Kavazidi, Nicolas Foroglou, Andrey Fedorov, Sarah F. Frisken, Ron Kikinis, Alexandra J. Golby, Nikos Chrisochoides:
Adaptive Physics-Based Non-Rigid Registration for Immersive Image-Guided Neuronavigation Systems. Frontiers Digit. Health 2: 613608 (2020) - [j17]Fan Zhang, Suheyla Cetin Karayumak, Nico Hoffmann, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell:
Deep white matter analysis (DeepWMA): Fast and consistent tractography segmentation. Medical Image Anal. 65: 101761 (2020) - [j16]Fan Zhang, Guoqiang Xie, Laura Leung, Michael A. Mooney, Lorenz Epprecht, Isaiah Norton, Yogesh Rathi, Ron Kikinis, Ossama Al-Mefty, Nikos Makris, Alexandra J. Golby, Lauren J. O'Donnell:
Creation of a novel trigeminal tractography atlas for automated trigeminal nerve identification. NeuroImage 220: 117063 (2020) - [c28]Jie Luo, Sarah F. Frisken, Duo Wang, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
Are Registration Uncertainty and Error Monotonically Associated? MICCAI (3) 2020: 264-274 - [c27]Nazim Haouchine, Parikshit Juvekar, William M. Wells III, Stephane Cotin, Alexandra J. Golby, Sarah F. Frisken:
Deformation Aware Augmented Reality for Craniotomy Using 3D/2D Non-rigid Registration of Cortical Vessels. MICCAI (4) 2020: 735-744 - [c26]Soumya Ghose, David Mills, Jhimli Mitra, L. Scott Smith, Desmond Teck-Beng Yeo, Alexandra J. Golby, Sarah F. Frisken, Thomas K. Foo:
Automatic brain structure-guided registration of pre and intra-operative 3D ultrasound for neurosurgery. Image-Guided Procedures 2020: 113150J - [c25]Nazim Haouchine, Parikshit Juvekar, Alexandra J. Golby, William M. Wells III, Stephane Cotin, Sarah F. Frisken:
Alignment of cortical vessels viewed through the surgical microscope with preoperative imaging to compensate for brain shift. Image-Guided Procedures 2020: 113151V - [i5]Jie Luo, Guangshen Ma, Sarah F. Frisken, Parikshit Juvekar, Nazim Haouchine, Zhe Xu, Yiming Xiao, Alexandra J. Golby, Patrick J. Codd, Masashi Sugiyama, William M. Wells III:
Do Public Datasets Assure Unbiased Comparisons for Registration Evaluation? CoRR abs/2003.09483 (2020)
2010 – 2019
- 2019
- [j15]Inês Machado, Matthew Toews, Elizabeth George, Prashin Unadkat, Walid Essayed, Jie Luo, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William M. Wells III, Yangming Ou:
Deformable MRI-Ultrasound registration using correlation-based attribute matching for brain shift correction: Accuracy and generality in multi-site data. NeuroImage 202 (2019) - [c24]Jie Luo, Alireza Sedghi, Karteek Popuri, Dana Cobzas, Miaomiao Zhang, Frank Preiswerk, Matthew Toews, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III, Sarah F. Frisken:
On the Applicability of Registration Uncertainty. MICCAI (2) 2019: 410-419 - [c23]Fan Zhang, Nico Hoffmann, Suheyla Cetin Karayumak, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell:
Deep White Matter Analysis: Fast, Consistent Tractography Segmentation Across Populations and dMRI Acquisitions. MICCAI (3) 2019: 599-608 - [c22]Ma Luo, Sarah F. Frisken, Saramati Narasimhan, Logan W. Clements, Reid Carleton Thompson, Alexandra J. Golby, Michael I. Miga:
A comprehensive model-assisted brain shift correction approach in image-guided neurosurgery: a case study in brain swelling and subsequent sag after craniotomy. Image-Guided Procedures 2019: 1095105 - [c21]Sarah F. Frisken, Ma Luo, Inês Machado, Prashin Unadkat, Parikshit Juvekar, Adomas Bunevicius, Matthew Toews, William M. Wells III, Michael I. Miga, Alexandra J. Golby:
Preliminary results comparing thin-plate splines with finite element methods for modeling brain deformation during neurosurgery using intraoperative ultrasound. Image-Guided Procedures 2019: 1095120 - [i4]Jie Luo, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III, Sarah F. Frisken:
Pilot Study on Verifying the Monotonic Relationship between Error and Uncertainty in Deformable Registration for Neurosurgery. CoRR abs/1908.07709 (2019) - 2018
- [j14]Inês Machado, Matthew Toews, Jie Luo, Prashin Unadkat, Walid Essayed, Elizabeth George, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William M. Wells III:
Non-rigid registration of 3D ultrasound for neurosurgery using automatic feature detection and matching. Int. J. Comput. Assist. Radiol. Surg. 13(10): 1525-1538 (2018) - [j13]Jie Luo, Sarah F. Frisken, Inês Machado, Miaomiao Zhang, Steve Pieper, Polina Golland, Matthew Toews, Prashin Unadkat, Alireza Sedghi, Haoyin Zhou, Alireza Mehrtash, Frank Preiswerk, Cheng-Chieh Cheng, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
Using the variogram for vector outlier screening: application to feature-based image registration. Int. J. Comput. Assist. Radiol. Surg. 13(12): 1871-1880 (2018) - [c20]Jie Luo, Matthew Toews, Inês Machado, Sarah F. Frisken, Miaomiao Zhang, Frank Preiswerk, Alireza Sedghi, Hongyi Ding, Steve Pieper, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation. MICCAI (4) 2018: 30-38 - [c19]Inês Machado, Matthew Toews, Jie Luo, Prashin Unadkat, Walid Essayed, Elizabeth George, Pedro Teodoro, Herculano Carvalho, Jorge Martins, Polina Golland, Steve Pieper, Sarah F. Frisken, Alexandra J. Golby, William M. Wells III, Yangming Ou:
Deformable MRI-Ultrasound Registration via Attribute Matching and Mutual-Saliency Weighting for Image-Guided Neurosurgery. POCUS/BIVPCS/CuRIOUS/CPM@MICCAI 2018: 165-171 - [i3]Jie Luo, Sarah F. Frisken, Karteek Popuri, Dana Cobzas, Frank Preiswerk, Matthew Toews, Miaomiao Zhang, Hongyi Ding, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
On the Ambiguity of Registration Uncertainty. CoRR abs/1803.05266 (2018) - [i2]Jie Luo, Matthew Toews, Inês Machado, Sarah F. Frisken, Miaomiao Zhang, Frank Preiswerk, Alireza Sedghi, Hongyi Ding, Steve Pieper, Polina Golland, Alexandra J. Golby, Masashi Sugiyama, William M. Wells III:
A Feature-Driven Active Framework for Ultrasound-Based Brain Shift Compensation. CoRR abs/1803.07682 (2018) - 2017
- [c18]Fan Zhang, Pegah Kahali, Yannick Suter, Isaiah Norton, Laura Rigolo, Peter Savadjiev, Yang Song, Yogesh Rathi, Tom Weidong Cai, William M. Wells III, Alexandra J. Golby, Lauren J. O'Donnell:
Automated connectivity-based groupwise cortical atlas generation: Application to data of neurosurgical patients with brain tumors for cortical parcellation prediction. ISBI 2017: 774-777 - [c17]Ma Luo, Sarah F. Frisken, Jared A. Weis, Logan W. Clements, Prashin Unadkat, Reid Carleton Thompson, Alexandra J. Golby, Michael I. Miga:
Validation of model-based brain shift correction in neurosurgery via intraoperative magnetic resonance imaging: preliminary results. Image-Guided Procedures 2017: 1013503 - 2016
- [j12]Zhenrui Chen, Yanmei Tie, Olutayo I. Olubiyi, Fan Zhang, Alireza Mehrtash, Laura Rigolo, Pegah Kahali, Isaiah Norton, Ofer Pasternak, Yogesh Rathi, Alexandra J. Golby, Lauren J. O'Donnell:
Corticospinal tract modeling for neurosurgical planning by tracking through regions of peritumoral edema and crossing fibers using two-tensor unscented Kalman filter tractography. Int. J. Comput. Assist. Radiol. Surg. 11(8): 1475-1486 (2016) - 2014
- [j11]Georg Langs, Andrew Sweet, Danial Lashkari, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland:
Decoupling function and anatomy in atlases of functional connectivity patterns: Language mapping in tumor patients. NeuroImage 103: 462-475 (2014) - 2013
- [j10]Petter Risholm, Firdaus Janoos, Isaiah Norton, Alexandra J. Golby, William M. Wells III:
Bayesian characterization of uncertainty in intra-subject non-rigid registration. Medical Image Anal. 17(5): 538-555 (2013) - [j9]Lauren J. O'Donnell, Alexandra J. Golby, Carl-Fredrik Westin:
Fiber clustering versus the parcellation-based connectome. NeuroImage 80: 283-289 (2013) - [c16]Matthew Toews, Alexandra J. Golby, William M. Wells III:
Inter-slice Correspondence for 2D Ultrasound-Guided Procedures. CLIP 2013: 143-150 - [i1]Jan Egger, Tina Kapur, Andriy Fedorov, Steve Pieper, James V. Miller, Harini Veeraraghavan, Bernd Freisleben, Alexandra J. Golby, Christopher Nimsky, Ron Kikinis:
GBM Volumetry using the 3D Slicer Medical Image Computing Platform. CoRR abs/1303.0964 (2013) - 2012
- [j8]Lauren J. O'Donnell, Laura Rigolo, Isaiah Norton, William M. Wells III, Carl-Fredrik Westin, Alexandra J. Golby:
fMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts. NeuroImage 60(1): 456-470 (2012) - [c15]Lauren J. O'Donnell, William M. Wells III, Alexandra J. Golby, Carl-Fredrik Westin:
Unbiased Groupwise Registration of White Matter Tractography. MICCAI (3) 2012: 123-130 - 2011
- [c14]Georg Langs, Danial Lashkari, Andrew Sweet, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland:
Learning an Atlas of a Cognitive Process in Its Functional Geometry. IPMI 2011: 135-146 - 2010
- [j7]Claus Reinsberger, Naoaki Tanaka, Andrew J. Cole, Jong Woo Lee, Barbara A. Dworetzky, Edward Bromfield, Lorie Hamiwka, Blaise F. Bourgeois, Alexandra J. Golby, Joseph R. Madsen, Steven M. Stufflebeam:
Current dipole orientation and distribution of epileptiform activity correlates with cortical thinning in left mesiotemporal epilepsy. NeuroImage 52(4): 1238-1242 (2010) - [c13]Lauren J. O'Donnell, Carl-Fredrik Westin, Isaiah Norton, Stephen Whalen, Laura Rigolo, Ruth E. Propper, Alexandra J. Golby:
The Fiber Laterality Histogram: A New Way to Measure White Matter Asymmetry. MICCAI (2) 2010: 225-232 - [c12]Georg Langs, Yanmei Tie, Laura Rigolo, Alexandra J. Golby, Polina Golland:
Functional Geometry Alignment and Localization of Brain Areas. NIPS 2010: 1225-1233
2000 – 2009
- 2009
- [j6]Lauren J. O'Donnell, Carl-Fredrik Westin, Alexandra J. Golby:
Tract-based morphometry for white matter group analysis. NeuroImage 45(3): 832-844 (2009) - 2008
- [j5]Yanmei Tie, Stephen Whalen, Ralph O. Suarez, Alexandra J. Golby:
Group independent component analysis of language fMRI from word generation tasks. NeuroImage 42(3): 1214-1225 (2008) - [c11]Arish A. Qazi, Gordon L. Kindlmann, Lauren O'Donnell, Sharon Peled, Alireza Radmanesh, Stephen Whalen, Alexandra J. Golby, Carl-Fredrik Westin:
Two-tensor streamline tractography through white matter intra-voxel fiber crossings: Assessed by fMRI. CVPR Workshops 2008: 1-8 - [c10]Julien Dauguet, Simon K. Warfield, Edward Bromfield, Alexandra J. Golby, Jong Woo Lee:
Comparison of the deformations of brain tissues caused by tumor in seizure and non-seizure patients. ISBI 2008: 1143-1146 - [c9]Clare B. Poynton, Mark Jenkinson, Stephen Whalen, Alexandra J. Golby, William M. Wells III:
Fieldmap-Free Retrospective Registration and Distortion Correction for EPI-Based Functional Imaging. MICCAI (2) 2008: 271-279 - 2007
- [j4]Neculai Archip, Olivier Clatz, Stephen Whalen, Daniel F. Kacher, Andriy Fedorov, Andriy Kot, Nikos Chrisochoides, Ferenc A. Jolesz, Alexandra J. Golby, Peter M. Black, Simon K. Warfield:
Non-rigid alignment of pre-operative MRI, fMRI, and DT-MRI with intra-operative MRI for enhanced visualization and navigation in image-guided neurosurgery. NeuroImage 35(2): 609-624 (2007) - [c8]Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Daniel Goldberg-Zimring, Daniel F. Kacher, Stephen Whalen, Ron Kikinis, Ferenc A. Jolesz, Olivier Clatz, Simon K. Warfield, Peter M. Black, Alexandra J. Golby:
Grid-Enabled Software Environment for Enhanced Dynamic Data-Driven Visualization and Navigation During Image-Guided Neurosurgery. International Conference on Computational Science (1) 2007: 980-987 - [c7]Lauren O'Donnell, Carl-Fredrik Westin, Alexandra J. Golby:
Tract-Based Morphometry. MICCAI (2) 2007: 161-168 - 2006
- [j3]Daniel M. Branco, Ralph O. Suarez, Stephen Whalen, James P. O'Shea, Aaron P. Nelson, Jaderson C. da Costa, Alexandra J. Golby:
Functional MRI of memory in the hippocampus: Laterality indices may be more meaningful if calculated from whole voxel distributions. NeuroImage 32(2): 592-602 (2006) - [c6]James P. O'Shea, William M. Wells III, Alexandra J. Golby:
Using surface normals to localize subdural intracranial electrodes placed during neurosurgery. ISBI 2006: 331-334 - [c5]Neculai Archip, Andriy Fedorov, Bryn Lloyd, Nikos Chrisochoides, Alexandra J. Golby, Peter M. Black, Simon K. Warfield:
Integration of patient specific modeling and advanced image processing techniques for image-guided neurosurgery. Image-Guided Procedures 2006: 61411E - [c4]Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Peter M. Black, Olivier Clatz, Alexandra J. Golby, Ron Kikinis, Simon K. Warfield:
Imaging and visual analysis - Toward real-time image guided neurosurgery using distributed and grid computing. SC 2006: 76 - 2005
- [j2]Simon K. Warfield, Steven Haker, Ion-Florin Talos, Corey Kemper, Neil I. Weisenfeld, Andrea J. U. Mewes, Daniel Goldberg-Zimring, Kelly H. Zou, Carl-Fredrik Westin, William M. Wells III, Clare M. Tempany, Alexandra J. Golby, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis:
Capturing intraoperative deformations: research experience at Brigham and Women's hospital. Medical Image Anal. 9(2): 145-162 (2005) - [j1]Olivier Clatz, Hervé Delingette, Ion-Florin Talos, Alexandra J. Golby, Ron Kikinis, Ferenc A. Jolesz, Nicholas Ayache, Simon K. Warfield:
Robust nonrigid registration to capture brain shift from intraoperative MRI. IEEE Trans. Medical Imaging 24(11): 1417-1427 (2005) - [c3]Olivier Clatz, Hervé Delingette, Ion-Florin Talos, Alexandra J. Golby, Ron Kikinis, Ferenc A. Jolesz, Nicholas Ayache, Simon K. Warfield:
Hybrid Formulation of the Model-Based Non-rigid Registration Problem to Improve Accuracy and Robustness. MICCAI (2) 2005: 295-302 - 2004
- [c2]Corey Kemper, Ion-Florin Talos, Alexandra J. Golby, Peter M. Black, Ron Kikinis, W. Eric L. Grimson, Simon K. Warfield:
An Anisotropic Material Model for Image Guided Neurosurgery. MICCAI (2) 2004: 267-275 - 2003
- [c1]Ion-Florin Talos, Lauren O'Donnell, Carl-Fredrik Westin, Simon K. Warfield, William M. Wells III, Seung-Schik Yoo, Lawrence P. Panych, Alexandra J. Golby, Hatsuho Mamata, Stefan S. Maier, Peter Ratiu, Charles R. G. Guttmann, Peter M. Black, Ferenc A. Jolesz, Ron Kikinis:
Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image-Guided Neurosurgery. MICCAI (1) 2003: 407-415
Coauthor Index
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