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2010 – 2019
- 2019
[j10]Vivek Bhardwaj, Steffen Heyne, Katarzyna Sikora, Leily Rabbani, Michael Rauer
, Fabian Kilpert, Andreas S. Richter, Devon Patrick Ryan, Thomas Manke:
snakePipes: facilitating flexible, scalable and integrative epigenomic analysis. Bioinform. 35(22): 4757-4759 (2019)- 2018
- [j9]Martin Raden, Syed M. Ali, Omer S. Alkhnbashi, Anke Busch, Fabrizio Costa, Jason A. Davis, Florian Eggenhofer, Rick Gelhausen, Jens Georg, Steffen Heyne, Michael Hiller, Kousik Kundu, Robert Kleinkauf, Steffen Lott, Mostafa M. Mohamed, Alexander Mattheis, Milad Miladi, Andreas S. Richter, Sebastian Will, Joachim Wolff, Patrick R. Wright, Rolf Backofen:
Freiburg RNA tools: a central online resource for RNA-focused research and teaching. Nucleic Acids Res. 46(Webserver-Issue): W25-W29 (2018) - 2016
- [j8]Fidel Ramírez, Devon Patrick Ryan, Björn A. Grüning, Vivek Bhardwaj, Fabian Kilpert, Andreas S. Richter, Steffen Heyne, Friederike Dündar, Thomas Manke:
deepTools2: a next generation web server for deep-sequencing data analysis. Nucleic Acids Res. 44(Webserver-Issue): W160-W165 (2016) - 2014
- [b1]Steffen Heyne:
Using local RNA secondary structures for computational comparison and clustering of RNA molecules. University of Freiburg, Germany, 2014 - [j7]Christina Otto, Mathias Möhl, Steffen Heyne, Mika Amit, Gad M. Landau, Rolf Backofen, Sebastian Will:
ExpaRNA-P: simultaneous exact pattern matching and folding of RNAs. BMC Bioinform. 15: 6602 (2014) - [j6]Mika Amit, Rolf Backofen, Steffen Heyne, Gad M. Landau, Mathias Möhl, Christina Otto, Sebastian Will:
Local Exact Pattern Matching for Non-FixedRNA Structures. IEEE ACM Trans. Comput. Biol. Bioinform. 11(1): 219-230 (2014) - [c4]Fabrizio Costa, Steffen Heyne, Dominic Rose, Rolf Backofen:
Scalable structural clustering of local RNA secondary structures. CMSR@ECCB 2014: 59-61 - 2013
- [j5]Sebastian Will, Michael F. Siebauer, Steffen Heyne, Jan Engelhardt, Peter F. Stadler, Kristin Reiche, Rolf Backofen:
LocARNAscan: Incorporating thermodynamic stability in sequence and structure-based RNA homology search. Algorithms Mol. Biol. 8: 14 (2013) - 2012
- [j4]Steffen Heyne, Fabrizio Costa, Dominic Rose, Rolf Backofen:
GraphClust: alignment-free structural clustering of local RNA secondary structures. Bioinform. 28(12): 224-232 (2012) - [j3]Nuno D. Mendes, Steffen Heyne, Ana T. Freitas, Marie-France Sagot, Rolf Backofen:
Navigating the unexplored seascape of pre-miRNA candidates in single-genome approaches. Bioinform. 28(23): 3034-3041 (2012) - [c3]Mika Amit, Rolf Backofen, Steffen Heyne, Gad M. Landau, Mathias Möhl, Christina Schmiedl, Sebastian Will:
Local Exact Pattern Matching for Non-fixed RNA Structures. CPM 2012: 306-320 - [c2]Christina Schmiedl, Mathias Möhl, Steffen Heyne, Mika Amit, Gad M. Landau, Sebastian Will, Rolf Backofen:
Exact Pattern Matching for RNA Structure Ensembles. RECOMB 2012: 245-260 - 2010
- [j2]Cameron Smith, Steffen Heyne, Andreas S. Richter, Sebastian Will, Rolf Backofen:
Freiburg RNA Tools: a web server integrating IntaRNA, ExpaRNA and LocARNA. Nucleic Acids Res. 38(Web-Server-Issue): 373-377 (2010)
2000 – 2009
- 2009
- [j1]Steffen Heyne, Sebastian Will, Michael Beckstette, Rolf Backofen:
Lightweight comparison of RNAs based on exact sequence-structure matches. Bioinform. 25(16): 2095-2102 (2009) - 2008
- [c1]Steffen Heyne, Sebastian Will, Michael Beckstette, Rolf Backofen:
Lightweight Comparison of RNAs based on Exact Sequence-structure Matches. German Conference on Bioinformatics 2008: 189-199
Coauthor Index
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