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Livia Perfetto
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2020 – today
- 2023
- [j21]Simona Panni, Kalpana Panneerselvam
, Pablo Porras, Margaret J. Duesbury, Livia Perfetto, Luana Licata
, Henning Hermjakob
, Sandra E. Orchard
:
The landscape of microRNA interaction annotation: analysis of three rare disorders as a case study. Database J. Biol. Databases Curation 2023 (2023) - [j20]Prisca Lo Surdo, Marta Iannuccelli, Silvia Contino, Luisa Castagnoli, Luana Licata
, Gianni Cesareni, Livia Perfetto
:
SIGNOR 3.0, the SIGnaling network open resource 3.0: 2022 update. Nucleic Acids Res. 51(D1): 631-637 (2023) - 2022
- [j19]Ilaria De Marinis, Prisca Lo Surdo, Gianni Cesareni, Livia Perfetto
:
SIGNORApp: a Cytoscape 3 application to access SIGNOR data. Bioinform. 38(6): 1764-1766 (2022) - [j18]Birgit H. M. Meldal
, Livia Perfetto
, Colin W. Combe, Tiago Lubiana
, João Vitor Ferreira Cavalcante
, Hema Bye-A-Jee
, Andra Waagmeester
, Noemi del-Toro
, Anjali Shrivastava
, Elisabet Barrera, Edith D. Wong, Bernhard Mlecnik
, Gabriela Bindea
, Kalpana Panneerselvam
, Egon L. Willighagen
, Juri Rappsilber, Pablo Porras
, Henning Hermjakob
, Sandra E. Orchard
:
Complex Portal 2022: new curation frontiers. Nucleic Acids Res. 50(D1): 578-586 (2022) - [j17]Noemi del-Toro
, Anjali Shrivastava
, Eliot Ragueneau
, Birgit Meldal
, Colin W. Combe, Elisabet Barrera
, Livia Perfetto
, Karyn How, Prashansa Ratan, Gautam Shirodkar, Odilia Lu
, Bálint Mészáros
, Xavier Watkins, Sangya Pundir
, Luana Licata
, Marta Iannuccelli, Matteo Pellegrini
, Maria Jesus Martin
, Simona Panni
, Margaret J. Duesbury, Sylvain D. Vallet
, Juri Rappsilber, Sylvie Ricard-Blum
, Gianni Cesareni, Lukasz Salwínski, Sandra E. Orchard
, Pablo Porras
, Kalpana Panneerselvam
, Henning Hermjakob
:
The IntAct database: efficient access to fine-grained molecular interaction data. Nucleic Acids Res. 50(D1): 648-653 (2022) - 2021
- [j16]Vasundra Touré, Steven Vercruysse
, Marcio Luis Acencio
, Ruth C. Lovering
, Sandra E. Orchard
, Glyn Bradley, Cristina Casals-Casas, Claudine Chaouiya, Noemi del-Toro, Åsmund Flobak
, Pascale Gaudet
, Henning Hermjakob
, Charles Tapley Hoyt
, Luana Licata
, Astrid Lægreid, Christopher J. Mungall, Anne Niknejad, Simona Panni, Livia Perfetto, Pablo Porras
, Dexter Pratt
, Julio Saez-Rodriguez
, Denis Thieffry
, Paul D. Thomas
, Dénes Türei, Martin Kuiper
:
The Minimum Information about a Molecular Interaction CAusal STatement (MI2CAST). Bioinform. 36(24): 5712-5718 (2021) - [j15]Seth Carbon, Eric Douglass, Benjamin M. Good, Deepak R. Unni
, Nomi L. Harris, Christopher J. Mungall, Siddartha Basu, Rex L. Chisholm
, Robert J. Dodson, Eric Hartline, Petra Fey, Paul D. Thomas, Laurent-Philippe Albou
, Dustin Ebert, Michael J. Kesling, Huaiyu Mi, Anushya Muruganujan, Xiaosong Huang, Tremayne Mushayahama, Sandra A. LaBonte
, Deborah A. Siegele, Giulia Antonazzo
, Helen Attrill
, Nick H. Brown, Phani V. Garapati
, Steven J. Marygold
, Vitor Trovisco, Gilberto dos Santos, Kathleen Falls, Christopher J. Tabone
, Pinglei Zhou, Joshua L. Goodman
, Victor B. Strelets, Jim Thurmond
, Penelope Garmiri
, Rizwan Ishtiaq, Milagros Rodríguez-López, Marcio Luis Acencio
, Martin Kuiper, Astrid Lægreid, Colin Logie
, Ruth C. Lovering
, Barbara Kramarz
, Shirin C. C. Saverimuttu, Sandra M. Pinheiro, Heather Gunn, Renzhi Su, Katherine E. Thurlow
, Marcus C. Chibucos
, Michelle G. Giglio, Suvarna Nadendla, James B. Munro
, Rebecca C. Jackson, Margaret J. Duesbury, Noemi del-Toro, Birgit H. M. Meldal
, Kalpana Paneerselvam, Livia Perfetto, Pablo Porras
, Sandra E. Orchard
, Anjali Shrivastava, Hsin-Yu Chang
, Robert D. Finn
, Alex L. Mitchell
, Neil D. Rawlings, Lorna J. Richardson
, Amaia Sangrador-Vegas
, Judith A. Blake, Karen R. Christie, Mary E. Dolan, Harold J. Drabkin, David P. Hill, Li Ni, Dmitry M. Sitnikov, Midori A. Harris, Stephen G. Oliver, Kim Rutherford
, Valerie Wood, Jaqueline Hayles, Jürg Bähler, Elizabeth R. Bolton, Jeffrey DePons, Melinda R. Dwinell, G. Thomas Hayman, Mary L. Kaldunski, Anne E. Kwitek
, Stanley J. F. Laulederkind, Cody Plasterer, Marek Tutaj, Mahima Vedi
, Shur-Jen Wang, Peter D'Eustachio, Lisa Matthews, James P. Balhoff, Suzi A. Aleksander, Michael J. Alexander, J. Michael Cherry
, Stacia R. Engel
, Felix Gondwe, Kalpana Karra, Stuart R. Miyasato, Robert S. Nash, Matt Simison, Marek S. Skrzypek, Shuai Weng, Edith D. Wong, Marc Feuermann
, Pascale Gaudet
, Anne Morgat, Erica Bakker, Tanya Z. Berardini
, Leonore Reiser
, Shabari Subramaniam
, Eva Huala
, Cecilia N. Arighi, Andrea H. Auchincloss, Kristian B. Axelsen
, Ghislaine Argoud-Puy, Alex Bateman
, Marie-Claude Blatter, Emmanuel Boutet, Emily Bowler
, Lionel Breuza, Alan J. Bridge
, Ramona Britto
, Hema Bye-A-Jee
, Cristina Casals-Casas, Elisabeth Coudert, Paul Denny
, Anne Estreicher, Maria Livia Famiglietti, George E. Georghiou
, Arnaud Gos, Nadine Gruaz-Gumowski, Emma Hatton-Ellis, Chantal Hulo, Alexandr Ignatchenko
, Florence Jungo, Kati Laiho, Philippe Le Mercier
, Damien Lieberherr, Antonia Lock
, Yvonne Lussi, Alistair MacDougall, Michele Magrane
, Maria Jesus Martin
, Patrick Masson
, Darren A. Natale
, Nevila Hyka-Nouspikel, Ivo Pedruzzi
, Lucille Pourcel, Sylvain Poux, Sangya Pundir, Catherine Rivoire
, Elena Speretta
, Shyamala Sundaram, Nidhi Tyagi, Kate Warner
, Rossana Zaru, Cathy H. Wu
, Alexander D. Diehl, Juancarlos Chan, Christian A. Grove, Raymond Y. N. Lee, Hans-Michael Müller, Daniela Raciti
, Kimberly Van Auken, Paul W. Sternberg, Matthew Berriman, Michael Paulini, Kevin L. Howe
, Sibyl Gao, Adam Wright, Lincoln Stein, Douglas G. Howe, Sabrina Toro
, Monte Westerfield, Pankaj Jaiswal, Laurel Cooper
, Justin Elser:
The Gene Ontology resource: enriching a GOld mine. Nucleic Acids Res. 49(Database-Issue): D325-D334 (2021) - 2020
- [j14]Livia Perfetto
, Chiara Pastrello
, Noemi del-Toro
, Margaret J. Duesbury, Marta Iannuccelli, Max Kotlyar, Luana Licata
, Birgit Meldal
, Kalpana Panneerselvam, Simona Panni
, N. Rahimzadeh, Sylvie Ricard-Blum
, Lukasz Salwínski, Anjali Shrivastava
, Gianni Cesareni, Matteo Pellegrini, Sandra E. Orchard
, Igor Jurisica, Henning Hermjakob
, Pablo Porras
:
The IMEx coronavirus interactome: an evolving map of Coronaviridae-host molecular interactions. Database J. Biol. Databases Curation 2020 (2020) - [j13]Marta Iannuccelli, Elisa Micarelli
, Prisca Lo Surdo, Alessandro Palma
, Livia Perfetto
, Ilaria Rozzo, Luisa Castagnoli, Luana Licata
, Gianni Cesareni:
CancerGeneNet: linking driver genes to cancer hallmarks. Nucleic Acids Res. 48(Database-Issue): D416-D421 (2020) - [j12]Luana Licata
, Prisca Lo Surdo, Marta Iannuccelli, Alessandro Palma
, Elisa Micarelli
, Livia Perfetto
, Daniele Peluso, Alberto Calderone, Luisa Castagnoli, Gianni Cesareni:
SIGNOR 2.0, the SIGnaling Network Open Resource 2.0: 2019 update. Nucleic Acids Res. 48(Database-Issue): D504-D510 (2020)
2010 – 2019
- 2019
- [j11]Edith D. Wong
, Marek S. Skrzypek, Shuai Weng
, Gail Binkley, Birgit H. M. Meldal
, Livia Perfetto
, Sandra E. Orchard
, Stacia R. Engel
, J. Michael Cherry
, SGD Project:
Integration of macromolecular complex data into the Saccharomyces Genome Database. Database J. Biol. Databases Curation 2019: baz008 (2019) - [j10]Livia Perfetto
, Marcio Luis Acencio
, Glyn Bradley, Gianni Cesareni, Noemi del-Toro
, Dávid Fazekas, Henning Hermjakob
, Tamás Korcsmáros
, Martin Kuiper, Astrid Lægreid, Prisca Lo Surdo, Ruth C. Lovering
, Sandra E. Orchard
, Pablo Porras
, Paul D. Thomas
, Vasundra Touré, John Zobolas
, Luana Licata
:
CausalTAB: the PSI-MITAB 2.8 updated format for signalling data representation and dissemination. Bioinform. 35(19): 3779-3785 (2019) - [j9]Birgit H. M. Meldal
, Hema Bye-A-Jee
, Lukás Gajdos, Zuzana Hammerová, Aneta Horácková, Filip Melicher
, Livia Perfetto
, Daniel Pokorný
, Milagros Rodríguez-López
, Alzbeta Türková, Edith D. Wong, Zengyan Xie, Elisabeth Barrera Casanova
, Noemi del-Toro
, Maximilian Koch
, Pablo Porras
, Henning Hermjakob
, Sandra E. Orchard
:
Complex Portal 2018: extended content and enhanced visualization tools for macromolecular complexes. Nucleic Acids Res. 47(Database-Issue): D550-D558 (2019) - 2018
- [j8]Prisca Lo Surdo, Alberto Calderone, Marta Iannuccelli, Luana Licata
, Daniele Peluso, Luisa Castagnoli
, Gianni Cesareni, Livia Perfetto
:
DISNOR: a disease network open resource. Nucleic Acids Res. 46(Database-Issue): D527-D534 (2018) - 2017
- [c1]Alberto Calderone, Luana Licata, Elisa Micarelli, Livia Perfetto, Gianni Cesareni:
Revealing Disease Similarities by Text Mining. SWAT4LS 2017 - 2016
- [j7]Livia Perfetto
, Leonardo Briganti, Alberto Calderone, Andrea Cerquone Perpetuini, Marta Iannuccelli, Francesca Langone
, Luana Licata
, Milica Marinkovic, Anna Mattioni, Theodora Pavlidou, Daniele Peluso, Lucia Lisa Petrilli
, Stefano Pirrò
, Daniela Posca, Elena Santonico
, Alessandra Silvestri
, Filomena Spada, Luisa Castagnoli
, Gianni Cesareni:
SIGNOR: a database of causal relationships between biological entities. Nucleic Acids Res. 44(Database-Issue): 548-554 (2016) - 2014
- [j6]Sandra E. Orchard
, Mais G. Ammari, Bruno Aranda, Lionel Breuza
, Leonardo Briganti, Fiona Broackes-Carter, Nancy H. Campbell
, Gayatri Chavali, Carol Chen
, Noemi del-Toro
, Margaret J. Duesbury
, Marine Dumousseau, Eugenia Galeota
, Ursula Hinz, Marta Iannuccelli, Sruthi Jagannathan, Rafael C. Jiménez
, Jyoti Khadake, Astrid Lægreid, Luana Licata
, Ruth C. Lovering
, Birgit Meldal
, Anna N. Melidoni
, Mila Milagros, Daniele Peluso, Livia Perfetto
, Pablo Porras, Arathi Raghunath, Sylvie Ricard-Blum
, Bernd Roechert, Andre Stutz, Michael Tognolli
, Kim Van Roey, Gianni Cesareni
, Henning Hermjakob
:
The MIntAct project - IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Res. 42(Database-Issue): 358-363 (2014) - 2012
- [j5]Luana Licata
, Leonardo Briganti, Daniele Peluso, Livia Perfetto
, Marta Iannuccelli, Eugenia Galeota
, Francesca Sacco, Anita Palma
, Aurelio Nardozza, Elena Santonico
, Luisa Castagnoli
, Gianni Cesareni:
MINT, the molecular interaction database: 2012 update. Nucleic Acids Res. 40(Database-Issue): 857-861 (2012) - 2011
- [j4]Martin Krallinger
, Miguel Vazquez
, Florian Leitner
, David Salgado
, Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto
, Leonardo Briganti, Luana Licata
, Marta Iannuccelli, Luisa Castagnoli
, Gianni Cesareni, Mike Tyers, Gerold Schneider, Fabio Rinaldi
, Robert Leaman, Graciela Gonzalez
, Sérgio Matos
, Sun Kim, W. John Wilbur, Luis M. Rocha
, Hagit Shatkay, Ashish V. Tendulkar, Shashank Agarwal, Feifan Liu, Xinglong Wang, Rafal Rak, Keith Noto, Charles Elkan, Zhiyong Lu:
The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text. BMC Bioinform. 12(S-8): S3 (2011) - [j3]Cecilia N. Arighi
, Phoebe M. Roberts, Shashank Agarwal, Sanmitra Bhattacharya, Gianni Cesareni, Andrew Chatr-aryamontri, Simon Clematide
, Pascale Gaudet, Michelle G. Giglio, Ian Harrow
, Eva Huala
, Martin Krallinger
, Ulf Leser, Donghui Li
, Feifan Liu, Zhiyong Lu, Lois J. Maltais, Naoaki Okazaki, Livia Perfetto
, Fabio Rinaldi
, Rune Sætre, David Salgado
, Padmini Srinivasan
, Philippe E. Thomas, Luca Toldo
, Lynette Hirschman, Cathy H. Wu
:
BioCreative III interactive task: an overview. BMC Bioinform. 12(S-8): S4 (2011) - [j2]Andrew Chatr-aryamontri, Andrew G. Winter, Livia Perfetto
, Leonardo Briganti, Luana Licata
, Marta Iannuccelli, Luisa Castagnoli
, Gianni Cesareni, Mike Tyers:
Benchmarking of the 2010 BioCreative Challenge III text-mining competition by the BioGRID and MINT interaction databases. BMC Bioinform. 12(S-8): S8 (2011) - 2010
- [j1]Arnaud Céol
, Andrew Chatr-aryamontri, Luana Licata
, Daniele Peluso, Leonardo Briganti, Livia Perfetto
, Luisa Castagnoli
, Gianni Cesareni:
MINT, the molecular interaction database: 2009 update. Nucleic Acids Res. 38(Database-Issue): 532-539 (2010)
Coauthor Index
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last updated on 2024-08-05 21:15 CEST by the dblp team
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