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Yue Joseph Wang
Yue Wang 0021
Person information
- affiliation: Virginia Tech, Department of Electrical and Computer Engineering, Arlington, VA, USA
Other persons with the same name
- Yue Wang — disambiguation page
- Yue Wang 0001 — Beijing Institute of Technology, Department of Electronic Engineering, China
- Yue Wang 0002 — Yamaguchi University, Ube, Japan
- Yue Wang 0003 — Chinese University of Hong Kong, Hong Kong
- Yue Wang 0004 — Maryland University, Baltimore, MD, USA
- Yue Wang 0005 — Institute for Infocomm Research, A*Star (Agency for Science, Technology and Research), Singapore, Singapore (and 1 more)
- Yue Wang 0006 — NUS Graduate School for Integrative Sciences and Engineering, National University of Singapore, Singapore
- Yue Wang 0007 — Department of Electronic Engineering, Tsinghua University, Beijing, China
- Yue Wang 0008 — Samsung Research and Development Institute, Communications Research Group, London, UK (and 2 more)
- Yue Wang 0009 — University of North Carolina at Charlotte, College of Computing and Informatics, NC, USA
- Yue Wang 0010 — Beijing University of Posts and Telecommunications, National Engineering Laboratory for Mobile Network, China
- Yue Wang 0011 — Clemson University, Department of Mechanical Engineering, SC, USA (and 1 more)
- Yue Wang 0012 — Shenzhen University, Shenzhen Institute of Computing Sciences, China (and 1 more)
- Yue Wang 0013 — Liaoning Shihua University, School of Information and Control Engineering, Fushun, China
- Yue Wang 0014 — Central University of Finance and Economics, School of Information, Beijing, China (and 1 more)
- Yue Wang 0015 — Bohai University, College of New Energy, Jinzhou, China
- Yue Wang 0017 — Microsoft Research Asia (and 1 more)
- Yue Wang 0018 — Xi'an Jiaotong University, School of Electrical Engineering, State Key Laboratory of Electrical Insulation and Power Equipment, China
- Yue Wang 0019 — Georgia State University, Atlanta, GA, USA (and 3 more)
- Yue Wang 0020 — Zhejiang University, State Key Laboratory of Industrial Control and Technology, China (and 1 more)
- Yue Wang 0022 — University of Missouri, Columbia, MO, USA
- Yue Wang 0023 — INRIA Centre de recherche Lille Nord Europe, Villeneuve d'Ascq, France
- Yue Wang 0024 — Macquarie University, Department of Management, Sydney, NSW, Australia (and 1 more)
- Yue Wang 0025 — Jilin University, State Key Laboratory of Automotive Simulation and Control, Changchun, China
- Yue Wang 0026 — Rice University, Department of Computer Science, Houston, TX, USA
- Yue Wang 0027 — Northwestern Polytechnical University, School of Marine Science and Technology, Xi'an, China
- Yue Wang 0028 — Nanjing University of Aeronautics and Astronautics, College of Economics and Management, China
- Yue Wang 0029 — Beihang University, School of Computer Science and Engineering, Beijing Key Laboratory of Digital Media, China
- Yue Wang 0030 — Beihang University in Shenzhen, Research Institute, China
- Yue Wang 0031 — Nanjing University of Posts and Telecommunications, College of Telecommunication and Information Engineering, China
- Yue Wang 0032 — Bytedance Inc, Beijing, China (and 1 more)
- Yue Wang 0033 — New Jersey Institute of Technology, Newark, NJ, USA
- Yue Wang 0034 — Chinese University of Hong Kong, Department of Computer Science and Engineering, Hong Kong
- Yue Wang 0035 — University of North Carolina at Chapel Hill, NC, USA (and 2 more)
- Yue Wang 0036 — Rice University, Department of Electrical and Computer Engineering, USA
- Yue Wang 0037 — University of Delaware, Department of Electrical and Computer Engineering, USA
- Yue Wang 0038 — Dalian University of Technology, Dalian, China
- Yue Wang 0039 — Soochow University
- Yue Wang 0040 — Research Organization of Information and Systems, Kashiwa, Chiba, Japan (and 1 more)
- Yue Wang 0041 — University of Southern California, CA, USA (and 2 more)
- Yue Wang 0042 — Hang Seng Management College, Department of Supply Chain and Information Management, Hong Kong (and 1 more)
- Yue Wang 0043 — Xi'an University, School of Information Engineering, China
- Yue Wang 0044 — China Agricultural University, College of Information and Electrical Engineering, Beijing, China
- Yue Wang 0045 — Nanjing University of Aeronautics and Astronautics, College of Automation Engineering, China (and 1 more)
- Yue Wang 0046 — Tianjin University, State Key Laboratory of Precision Measuring Technology and Instruments, China
- Yue Wang 0047 — Beijing University of Posts and Telecommunications, School of Information and Communication Engineering, China
- Yue Wang 0048 — Nanchang University, Second Clinical Medical College, China
- Yue Wang 0049 — China University of Mining and Technology, School of Information and Control Engineering, Xuzhou, China
- Yue Wang 0050 — Shandong University, School of Mathematics, Jinan, China
- Yue Wang 0051 — PLA Information Engineering University, School of Geospatial Information, Zhengzhou, China
- Yue Wang 0052 — Qingdao University, College of Computer Science & Technology, China
- Yue Wang 0053 — Shanxi Normal University, College of Mathematics and Computer Science, China
- Yue Wang 0054 — University of Utah, Department of Mechanical Engineering, Salt Lake City, UT, USA (and 3 more)
- Yue Wang 0055 — New York University, Tandon School of Engineering, Department of Electrical and Computer Engineering, NY, USA
- Yue Wang 0056 — Northeast Electric Power University, School of Automation Engineering, Jilin, China
- Yue Wang 0057 — Shenzhen University, College of Electronics and Information Engineering, Guangdong Engineering Research Center of Position Sensing and Detection, China
- Yue Wang 0058 — Beihang University, School of Cyber Science and Technology, Beijing, China
- Yue Wang 0059 — Xi'an Physical Education University, China
- Yue Wang 0060 — Xi'an Jiaotong-Liverpool University, Department of Mathematical Sciences, Suzhou, China
- Yue Wang 0061 — Zhejiang University, School of Materials Science and Engineering, Hangzhou, China
- Yue Wang 0062 — Shanghai Ocean University, College of Information Technology, China
- Yue Wang 0063 — Xidian University, School of Cyber Engineering, Xi'an, China (and 1 more)
- Yue Wang 0065 — Simon Fraser University, Department of Linguistics, Language and Brain Lab, Burnaby, Canada
- Yue Wang 0066 — University of North Carolina at Chapel Hill, NC, USA
- Yue Wang 0067 — University of Greenwich, Greenwich Campus, London, UK
- Yue Wang 0068 — University of Central Florida, Orlando, FL, USA (and 1 more)
- Yue Wang 0069 — Bohai University, School of Information Science and Technology, Jinzhou, China
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2020 – today
- 2024
- [j82]Chiung-Ting Wu, Dongping Du, Lulu Chen, Rujia Dai, Chunyu Liu, Guoqiang Yu, Saurabh Bhardwaj, Sarah J. Parker, Zhen Zhang, Robert Clarke, David M. Herrington, Yue Wang:
CAM3.0: determining cell type composition and expression from bulk tissues with fully unsupervised deconvolution. Bioinform. 40(3) (2024) - 2023
- [j81]Tian Xia, Xiaohang Fu, Michael J. Fulham, Yue Wang, David Feng, Jinman Kim:
CT-based Radiogenomics Framework for COVID-19 Using ACE2 Imaging Representations. J. Digit. Imaging 36(6): 2356-2366 (2023) - 2022
- [j80]Lulu Chen, Chiung-Ting Wu, Chia-Hsiang Lin, Rujia Dai, Chunyu Liu, Robert Clarke, Guoqiang Yu, Jennifer E. Van Eyk, David M. Herrington, Yue Wang:
swCAM: estimation of subtype-specific expressions in individual samples with unsupervised sample-wise deconvolution. Bioinform. 38(5): 1403-1410 (2022) - 2021
- [j79]Yue Wang, David M. Herrington:
Machine intelligence enabled radiomics. Nat. Mach. Intell. 3(10): 838-839 (2021) - 2020
- [j78]Yizhi Wang, Congchao Wang, Petter Ranefall, Gerard Broussard, Yinxue Wang, Guilai Shi, Boyu Lyu, Chiung-Ting Wu, Yue Wang, Lin Tian, Guoqiang Yu:
SynQuant: an automatic tool to quantify synapses from microscopy images. Bioinform. 36(5): 1599-1606 (2020) - [j77]Chiung-Ting Wu, Yizhi Wang, Yinxue Wang, Timothy M. D. Ebbels, Ibrahim Karaman, Gonçalo Graça, Rui Pinto, David M. Herrington, Yue Wang, Guoqiang Yu:
Targeted realignment of LC-MS profiles by neighbor-wise compound-specific graphical time warping with misalignment detection. Bioinform. 36(9): 2862-2871 (2020) - [j76]Lulu Chen, Chiung-Ting Wu, Niya Wang, David M. Herrington, Robert Clarke, Yue Wang:
debCAM: a bioconductor R package for fully unsupervised deconvolution of complex tissues. Bioinform. 36(12): 3927-3929 (2020)
2010 – 2019
- 2019
- [j75]Jun Ruan, Zhen Liu, Ming Sun, Yue Wang, Junqiu Yue, Guoqiang Yu:
DBS: a fast and informative segmentation algorithm for DNA copy number analysis. BMC Bioinform. 20(1): 1:1-1:14 (2019) - [c90]Heng Wang, Donghao Zhang, Yang Song, Siqi Liu, Yue Wang, Dagan Feng, Hanchuan Peng, Weidong Cai:
Segmenting Neuronal Structure in 3D Optical Microscope Images via Knowledge Distillation with Teacher-Student Network. ISBI 2019: 228-231 - 2018
- [j74]Chia-Hsiang Lin, Ruiyuan Wu, Wing-Kin Ma, Chong-Yung Chi, Yue Wang:
Maximum Volume Inscribed Ellipsoid: A New Simplex-Structured Matrix Factorization Framework via Facet Enumeration and Convex Optimization. SIAM J. Imaging Sci. 11(2): 1651-1679 (2018) - [j73]Afaf Tareef, Yang Song, Heng Huang, Dagan Feng, Mei Chen, Yue Wang, Weidong Cai:
Multi-Pass Fast Watershed for Accurate Segmentation of Overlapping Cervical Cells. IEEE Trans. Medical Imaging 37(9): 2044-2059 (2018) - [j72]Chia-Hsiang Lin, Chong-Yung Chi, Lulu Chen, David J. Miller, Yue Wang:
Detection of Sources in Non-Negative Blind Source Separation by Minimum Description Length Criterion. IEEE Trans. Neural Networks Learn. Syst. 29(9): 4022-4037 (2018) - [c89]Donghao Zhang, Yang Song, Siqi Liu, Dagan Feng, Yue Wang, Weidong Cai:
Nuclei instance segmentation with dual contour-enhanced adversarial network. ISBI 2018: 409-412 - [c88]Yinxue Wang, Maria Ali, Yue Joseph Wang, Sarah Kucenas, Guoqiang Yu:
Detection and tracking of migrating oligodendrocyte progenitor cells from in vivo fluorescence time-lapse imaging data. ISBI 2018: 961-964 - 2017
- [j71]Yinxue Wang, Guilai Shi, David J. Miller, Yizhi Wang, Congchao Wang, Gerard Broussard, Yue Wang, Lin Tian, Guoqiang Yu:
Automated Functional Analysis of Astrocytes from Chronic Time-Lapse Calcium Imaging Data. Frontiers Neuroinformatics 11: 48 (2017) - [j70]Afaf Tareef, Yang Song, Weidong Cai, Heng Huang, Hang Chang, Yue Wang, Michael J. Fulham, Dagan Feng, Mei Chen:
Automatic segmentation of overlapping cervical smear cells based on local distinctive features and guided shape deformation. Neurocomputing 221: 94-107 (2017) - [j69]Afaf Tareef, Yang Song, Heng Huang, Yue Wang, Dagan Feng, Mei Chen, Weidong Cai:
Optimizing the cervix cytological examination based on deep learning and dynamic shape modeling. Neurocomputing 248: 28-40 (2017) - [j68]Yang Song, Qing Li, Fan Zhang, Heng Huang, Dagan Feng, Yue Wang, Mei Chen, Weidong Cai:
Dual discriminative local coding for tissue aging analysis. Medical Image Anal. 38: 65-76 (2017) - 2016
- [j67]Yang Song, Weidong Cai, Heng Huang, Dagan Feng, Yue Wang, Mei Chen:
Bioimage classification with subcategory discriminant transform of high dimensional visual descriptors. BMC Bioinform. 17: 465:1-465:15 (2016) - [j66]Ibrahim Youssef, Robert Clarke, Ie-Ming Shih, Yue Joseph Wang, Guoqiang Yu:
Biologically inspired survival analysis based on integrating gene expression as mediator with genomic variants. Comput. Biol. Medicine 77: 231-239 (2016) - [j65]Arul-Murugan Ambikapathi, Tsung-Han Chan, Chia-Hsiang Lin, Fei-Shih Yang, Chong-Yung Chi, Yue Wang:
Convex-Optimization-Based Compartmental Pharmacokinetic Analysis for Prostate Tumor Characterization Using DCE-MRI. IEEE Trans. Biomed. Eng. 63(4): 707-720 (2016) - [c87]Yinxue Wang, Guilai Shi, David J. Miller, Yizhi Wang, Gerard Broussard, Yue Wang, Lin Tian, Guoqiang Yu:
FASP: A machine learning approach to functional astrocyte phenotyping from time-lapse calcium imaging data. ISBI 2016: 351-354 - [c86]Afaf Tareef, Yang Song, Tom Weidong Cai, Yue Wang, David Dagan Feng, Mei Chen:
Automatic nuclei and cytoplasm segmentation of leukocytes with color and texture-based image enhancement. ISBI 2016: 935-938 - [c85]Yang Song, Weidong Cai, Fan Zhang, Heng Huang, David Dagan Feng, Yue Wang, Mei Chen:
Texture analysis of tissue aging using global and cluster constrained local coding. ISBI 2016: 1229-1232 - [c84]Yizhi Wang, David J. Miller, Kira Poskanzer, Yue Wang, Lin Tian, Guoqiang Yu:
Graphical Time Warping for Joint Alignment of Multiple Curves. NIPS 2016: 3648-3656 - 2015
- [j64]Niya Wang, Ting Gong, Robert Clarke, Lulu Chen, Ie-Ming Shih, Zhen Zhang, Douglas A. Levine, Jianhua Xuan, Yue Joseph Wang:
UNDO: a Bioconductor R package for unsupervised deconvolution of mixed gene expressions in tumor samples. Bioinform. 31(1): 137-139 (2015) - [j63]Ye Tian, Bai Zhang, Eric P. Hoffman, Robert Clarke, Zhen Zhang, Ie-Ming Shih, Jianhua Xuan, David M. Herrington, Yue Joseph Wang:
KDDN: an open-source Cytoscape app for constructing differential dependency networks with significant rewiring. Bioinform. 31(2): 287-289 (2015) - [j62]Xu Shi, Robert O. Barnes, Li Chen, Ayesha N. Shajahan-Haq, Leena Hilakivi-Clarke, Robert Clarke, Yue Joseph Wang, Jianhua Xuan:
BMRF-Net: a software tool for identification of protein interaction subnetworks by a bagging Markov random field-based method. Bioinform. 31(14): 2412-2414 (2015) - [j61]Mohammad R. Nezami Ranjbar, Cristina Di Poto, Yue Joseph Wang, Habtom W. Ressom:
SIMAT: GC-SIM-MS data analysis tool. BMC Bioinform. 16: 259:1-259:12 (2015) - [j60]Yang Song, Tom Weidong Cai, Heng Huang, Yun Zhou, Yue Wang, David Dagan Feng:
Locality-constrained Subcluster Representation Ensemble for lung image classification. Medical Image Anal. 22(1): 102-113 (2015) - [j59]Mohammad R. Nezami Ranjbar, Mahlet G. Tadesse, Yue Joseph Wang, Habtom W. Ressom:
Bayesian Normalization Model for Label-Free Quantitative Analysis by LC-MS. IEEE ACM Trans. Comput. Biol. Bioinform. 12(4): 914-927 (2015) - [j58]Yang Song, Tom Weidong Cai, Heng Huang, Yun Zhou, David Dagan Feng, Yue Wang, Michael J. Fulham, Mei Chen:
Large Margin Local Estimate With Applications to Medical Image Classification. IEEE Trans. Medical Imaging 34(6): 1362-1377 (2015) - [c83]Afaf Tareef, Yang Song, Weidong Cai, Heng Huang, Yue Wang, Dagan Feng, Mei Chen:
Learning Shape-Driven Segmentation Based on Neural Network and Sparse Reconstruction Toward Automated Cell Analysis of Cervical Smears. ICONIP (1) 2015: 390-400 - 2014
- [j57]Bai Zhang, Xuchu Hou, Xiguo Yuan, Ie-Ming Shih, Zhen Zhang, Robert Clarke, Roger R. Wang, Yi Fu, Subha Madhavan, Yue Joseph Wang, Guoqiang Yu:
AISAIC: a software suite for accurate identification of significant aberrations in cancers. Bioinform. 30(3): 431-433 (2014) - [j56]Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Joseph Wang, Robert Clarke:
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic. Bioinform. 30(15): 2242 (2014) - [j55]Ye Tian, Bai Zhang, Eric P. Hoffman, Robert Clarke, Zhen Zhang, Ie-Ming Shih, Jianhua Xuan, David M. Herrington, Yue Joseph Wang:
Knowledge-fused differential dependency network models for detecting significant rewiring in biological networks. BMC Syst. Biol. 8: 87 (2014) - [j54]Ye Tian, Sean S. Wang, Zhen Zhang, Olga C. Rodriguez, Emanuel Petricoin III, Ie-Ming Shih, Daniel Chan, Maria Avantaggiati, Guoqiang Yu, Shaozhen Ye, Robert Clarke, Chao Wang, Bai Zhang, Yue Joseph Wang, Chris Albanese:
Integration of Network Biology and Imaging to Study Cancer Phenotypes and Responses. IEEE ACM Trans. Comput. Biol. Bioinform. 11(6): 1009-1019 (2014) - [c82]Ibrahim Mohamed Ibrahim, Guoqiang Yu, Li Chen, Yue Wang:
Enhancing the convex analysis of mixtures technique for estimating DCE-MRI pharmacokinetic parameters. EMBC 2014: 6434-6437 - [c81]Yinxue Wang, Luca Bello, Yue Wang, Craig M. McDonald, Eric P. Hoffman, Guoqiang Yu:
Predicting age at loss of ambulation in Duchenne muscular dystrophy with deep phenotypic measures. GlobalSIP 2014: 1344-1347 - [c80]Guoqiang Yu, Niya Wang, Roger R. Wang, Sean S. Wang, Yue Wang:
A feasible roadmap to identifying significant intercellular genomic heterogeneity in deep sequencing data. GlobalSIP 2014: 1364-1367 - [c79]Ye Tian, Bai Zhang, Yi Fu, Guoqiang Yu, Yue Wang:
A statistical approach to identifying significant transgenerational methylation changes. GlobalSIP 2014: 1394-1397 - [c78]Shibiao Wan, Man-Wai Mak, Bai Zhang, Yue Joseph Wang, Sun-Yuan Kung:
Ensemble random projection for multi-label classification with application to protein subcellular localization. ICASSP 2014: 5999-6003 - [i3]Liang Zhao, Jianhua Xuan, Yue Wang:
A feasible roadmap for developing volumetric probability atlas of localized prostate cancer. CoRR abs/1409.4139 (2014) - 2013
- [j53]Tsung-Heng Tsai, Mahlet G. Tadesse, Cristina Di Poto, Lewis K. Pannell, Yehia Mechref, Yue Joseph Wang, Habtom W. Ressom:
Multi-profile Bayesian alignment model for LC-MS data analysis with integration of internal standards. Bioinform. 29(21): 2774-2780 (2013) - [j52]Yang Song, Weidong Cai, Heng Huang, Yue Wang, David Dagan Feng, Mei Chen:
Region-based progressive localization of cell nuclei in microscopic images with data adaptive modeling. BMC Bioinform. 14: 173 (2013) - [j51]Niya Wang, Fan Meng, Li Chen, Subha Madhavan, Robert Clarke, Eric P. Hoffman, Jianhua Xuan, Yue Joseph Wang:
The CAM software for nonnegative blind source separation in R-Java. J. Mach. Learn. Res. 14(1): 2899-2903 (2013) - [j50]Tsung-Heng Tsai, Mahlet G. Tadesse, Yue Joseph Wang, Habtom W. Ressom:
Profile-Based LC-MS Data Alignment-A Bayesian Approach. IEEE ACM Trans. Comput. Biol. Bioinform. 10(2): 494-503 (2013) - [c77]Shibiao Wan, Man-Wai Mak, Bai Zhang, Yue Joseph Wang, Sun-Yuan Kung:
An ensemble classifier with random projection for predicting multi-label protein subcellular localization. BIBM 2013: 35-42 - 2012
- [j49]Jinghua Gu, Jianhua Xuan, Rebecca B. Riggins, Li Chen, Yue Joseph Wang, Robert Clarke:
Robust identification of transcriptional regulatory networks using a Gibbs sampler on outlier sum statistic. Bioinform. 28(15): 1990-1997 (2012) - [j48]Chen Wang, Sook S. Ha, Jianhua Xuan, Yue Joseph Wang, Eric P. Hoffman:
Computational analysis of muscular dystrophy sub-types using a novel integrative scheme. Neurocomputing 92: 9-17 (2012) - [j47]Xiguo Yuan, David J. Miller, Junying Zhang, David M. Herrington, Yue Wang:
An Overview of Population Genetic Data Simulation. J. Comput. Biol. 19(1): 42-54 (2012) - [j46]Chen Wang, Jianhua Xuan, Ie-Ming Shih, Robert Clarke, Yue Joseph Wang:
Regulatory component analysis: A semi-blind extraction approach to infer gene regulatory networks with imperfect biological knowledge. Signal Process. 92(8): 1902-1915 (2012) - [j45]Bai Zhang, David J. Miller, Yue Joseph Wang:
Nonlinear System Modeling With Random Matrices: Echo State Networks Revisited. IEEE Trans. Neural Networks Learn. Syst. 23(1): 175-182 (2012) - [c76]Mohammad R. Nezami Ranjbar, Yi Zhao, Mahlet G. Tadesse, Yue Joseph Wang, Habtom W. Ressom:
Evaluation of normalization methods for analysis of LC-MS data. BIBM Workshops 2012: 610-617 - [c75]Yang Song, Weidong Cai, Heng Huang, Yue Wang, David Dagan Feng:
Object localization in medical images based on graphical model with contrast and interest-region terms. CVPR Workshops 2012: 1-7 - [c74]Mohammad R. Nezami Ranjbar, Mahlet G. Tadesse, Yue Joseph Wang, Habtom W. Ressom:
Normalization of LC-MS data using Gaussian process. GENSiPS 2012: 187-190 - [c73]Yang Song, Weidong Cai, Yue Wang, David Dagan Feng:
Location classification of lung nodules with optimized graph construction. ISBI 2012: 1439-1442 - [c72]Yang Song, Weidong Cai, Heng Huang, Yue Wang, David Dagan Feng:
Context Enhanced Graphical Model for Object Localization in Medical Images. MCV 2012: 194-205 - [c71]Li Chen, Jianhua Xuan, Jinghua Gu, Yue Wang, Zhen Zhang, Tian-Li Wang, Ie-Ming Shih:
Integrative Network Analysis to Identify Aberrant Pathway Networks in Ovarian Cancer. Pacific Symposium on Biocomputing 2012: 31-42 - [c70]Huaijie Zhu, Xiaochun Yang, Bin Wang, Yue Joseph Wang:
Improving Text Search on Hybrid Data. WAIM Workshops 2012: 192-203 - [i2]Bai Zhang, Yue Joseph Wang:
Learning Structural Changes of Gaussian Graphical Models in Controlled Experiments. CoRR abs/1203.3532 (2012) - 2011
- [j44]Guoqiang Yu, Huai Li, Sook S. Ha, Ie-Ming Shih, Robert Clarke, Eric P. Hoffman, Subha Madhavan, Jianhua Xuan, Yue Joseph Wang:
PUGSVM: a caBIGTM analytical tool for multiclass gene selection and predictive classification. Bioinform. 27(5): 736-738 (2011) - [j43]Bai Zhang, Ye Tian, Lu Jin, Huai Li, Ie-Ming Shih, Subha Madhavan, Robert Clarke, Eric P. Hoffman, Jianhua Xuan, Leena Hilakivi-Clarke, Yue Joseph Wang:
DDN: a caBIG® analytical tool for differential network analysis. Bioinform. 27(7): 1036-1038 (2011) - [j42]Guoqiang Yu, Bai Zhang, G. Steven Bova, Jianfeng Xu, Ie-Ming Shih, Yue Joseph Wang:
BACOM: in silico detection of genomic deletion types and correction of normal cell contamination in copy number data. Bioinform. 27(11): 1473-1480 (2011) - [j41]Li Chen, Tsung-Han Chan, Peter L. Choyke, Elizabeth M. C. Hillman, Chong-Yung Chi, Zaver M. Bhujwalla, Ge Wang, Sean S. Wang, Zsolt Szabo, Yue Joseph Wang:
CAM-CM: a signal deconvolution tool for in vivo dynamic contrast-enhanced imaging of complex tissues. Bioinform. 27(18): 2607-2609 (2011) - [j40]Ting Gong, Jianhua Xuan, Li Chen, Rebecca B. Riggins, Huai Li, Eric P. Hoffman, Robert Clarke, Yue Joseph Wang:
Motif-guided sparse decomposition of gene expression data for regulatory module identification. BMC Bioinform. 12: 82 (2011) - [j39]Li Chen, Jianhua Xuan, Rebecca B. Riggins, Robert Clarke, Yue Joseph Wang:
Identifying cancer biomarkers by network-constrained support vector machines. BMC Syst. Biol. 5: 161 (2011) - [j38]Li Chen, Peter L. Choyke, Tsung-Han Chan, Chong-Yung Chi, Ge Wang, Yue Joseph Wang:
Tissue-Specific Compartmental Analysis for Dynamic Contrast-Enhanced MR Imaging of Complex Tumors. IEEE Trans. Medical Imaging 30(12): 2044-2058 (2011) - [c69]Ye Tian, Bai Zhang, Ie-Ming Shih, Yue Joseph Wang:
Knowledge-guided differential dependency network learning for detecting structural changes in biological networks. BCB 2011: 254-263 - [c68]Tsung-Heng Tsai, Mahlet G. Tadesse, Yue Joseph Wang, Habtom W. Ressom:
Bayesian Alignment Model for LC-MS Data. BIBM 2011: 261-264 - [c67]Mohammad R. Nezami Ranjbar, Yue Joseph Wang, Habtom W. Ressom:
Quality assessment of LC-MS metabolomic data. BIBM Workshops 2011: 1034-1036 - [c66]Jinghua Gu, Chen Wang, Ie-Ming Shih, Tian-Li Wang, Yue Wang, Robert Clarke, Jianhua Xuan:
GIST: A Gibbs sampler to identify intracellular signal transduction pathways. EMBC 2011: 2434-2437 - [i1]Ge Wang, Jie Zhang, Hao Gao, Victor Weir, Hengyong Yu, Wenxiang Cong, Xiaochen Xu, Haiou Shen, James Bennett, Yue Joseph Wang, Michael W. Vannier:
Omni-tomography/Multi-tomography -- Integrating Multiple Modalities for Simultaneous Imaging. CoRR abs/1106.2124 (2011) - 2010
- [j37]Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke:
Multilevel support vector regression analysis to identify condition-specific regulatory networks. Bioinform. 26(11): 1416-1422 (2010) - [j36]Chen Wang, Jianhua Xuan, Huai Li, Yue Joseph Wang, Ming Zhan, Eric P. Hoffman, Robert Clarke:
Knowledge-guided gene ranking by coordinative component analysis. BMC Bioinform. 11: 162 (2010) - [j35]Yuanjian Feng, Guoqiang Yu, Tian-Li Wang, Ie-Ming Shih, Yue Joseph Wang:
Analysing DNA copy number changes using Fused Margin Regression. Int. J. Funct. Informatics Pers. Medicine 3(1): 3-15 (2010) - [j34]Guoqiang Yu, Yuanjian Feng, David J. Miller, Jianhua Xuan, Eric P. Hoffman, Robert Clarke, Ben Davidson, Ie-Ming Shih, Yue Joseph Wang:
Matched Gene Selection and Committee Classifier for Molecular Classification of Heterogeneous Diseases. J. Mach. Learn. Res. 11: 2141-2167 (2010) - [j33]Fa-Yu Wang, Chong-Yung Chi, Tsung-Han Chan, Yue Joseph Wang:
Nonnegative Least-Correlated Component Analysis for Separation of Dependent Sources by Volume Maximization. IEEE Trans. Pattern Anal. Mach. Intell. 32(5): 875-888 (2010) - [c65]Jinghua Gu, Jianhua Xuan, Yue Joseph Wang, Rebecca B. Riggins, Robert Clarke:
Identification of Transcriptional Regulatory Networks by Learning the Marginal Function of Outlier Sum Statistic. ICMLA 2010: 281-286 - [c64]Chen Wang, Sook S. Ha, Yue Joseph Wang, Jianhua Xuan, Eric P. Hoffman:
Computational Analysis of Muscular Dystrophy Sub-types Using a Novel Integrative Scheme. ICMLA 2010: 287-292 - [c63]Bai Zhang, Yue Joseph Wang:
Learning Structural Changes of Gaussian Graphical Models in Controlled Experiments. UAI 2010: 701-708 - [p2]Wing-Kin Ma, Tsung-Han Chan, Chong-Yung Chi, Yue Wang:
Convex analysis for non-negative blind source separation with application in imaging. Convex Optimization in Signal Processing and Communications 2010: 239-265
2000 – 2009
- 2009
- [j32]Bai Zhang, Huai Li, Rebecca B. Riggins, Ming Zhan, Jianhua Xuan, Zhen Zhang, Eric P. Hoffman, Robert Clarke, Yue Joseph Wang:
Differential dependency network analysis to identify condition-specific topological changes in biological networks. Bioinform. 25(4): 526-532 (2009) - [j31]David J. Miller, Yanxin Zhang, Guoqiang Yu, Yongmei Liu, Li Chen, Carl D. Langefeld, David M. Herrington, Yue Joseph Wang:
An algorithm for learning maximum entropy probability models of disease risk that efficiently searches and sparingly encodes multilocus genomic interactions. Bioinform. 25(19): 2478-2485 (2009) - [j30]Li Chen, Jianhua Xuan, Yue Joseph Wang, Eric P. Hoffman, Rebecca B. Riggins, Robert Clarke:
Identification of condition-specific regulatory modules through multi-level motif and mRNA expression analysis. Int. J. Comput. Biol. Drug Des. 2(1): 1-20 (2009) - [j29]Li Chen, Jianhua Xuan, Chen Wang, Yue Joseph Wang, Ie-Ming Shih, Tian-Li Wang, Zhen Zhang, Robert Clarke, Eric P. Hoffman:
Biomarker identification by knowledge-driven multilevel ICA and motif analysis. Int. J. Data Min. Bioinform. 3(4): 365-381 (2009) - [c62]Guoqiang Yu, Bai Zhang, Jianfeng Xu, Ie-Ming Shih, Yue Joseph Wang:
Accurate Estimation of Genomic Deletions and Normal Cell Contamination by Bayesian Analysis of Mixtures. BIBM 2009: 332-337 - [c61]Yuanjian Feng, Guoqiang Yu, Tian-Li Wang, Ie-Ming Shih, Yue Joseph Wang:
Analyzing DNA Copy Number Changes Using Fused Margin Regression. BIBM 2009: 388-391 - [c60]Wenjun Wang, Junying Zhang, Jin Xu, Yue Joseph Wang:
A Graph-Based Approach for Clustering Analysis of Gene Expression Data by Using Topological Features. CSIE (1) 2009: 559-563 - 2008
- [j28]Li Chen, Jianhua Xuan, Chen Wang, Ie-Ming Shih, Yue Joseph Wang, Zhen Zhang, Eric P. Hoffman, Robert Clarke:
Knowledge-guided multi-scale independent component analysis for biomarker identification. BMC Bioinform. 9 (2008) - [j27]Chen Wang, Jianhua Xuan, Li Chen, Po Zhao, Yue Joseph Wang, Robert Clarke, Eric P. Hoffman:
Motif-directed network component analysis for regulatory network inference. BMC Bioinform. 9(S-1) (2008) - [j26]Yitan Zhu, Huai Li, David J. Miller, Zuyi Wang, Jianhua Xuan, Robert Clarke, Eric P. Hoffman, Yue Joseph Wang:
caBIGTM VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data. BMC Bioinform. 9 (2008) - [j25]David J. Miller, Siddharth Pal, Yue Joseph Wang:
Extensions of transductive learning for distributed ensemble classification and application to biometric authentication. Neurocomputing 72(1-3): 119-125 (2008) - [j24]Tsung-Han Chan, Wing-Kin Ma, Chong-Yung Chi, Yue Joseph Wang:
A Convex Analysis Framework for Blind Separation of Non-Negative Sources. IEEE Trans. Signal Process. 56(10-2): 5120-5134 (2008) - [c59]Jianghui Xiong, Chen Wang, Bai Zhang, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke, Jianhua Xuan:
Inferring Condition-Specific miRNA-Gene Modules from miRNA and mRNA Profiling Data. BCBGC 2008: 49-55 - [c58]Li Chen, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke:
Identification of Condition-specific Regulatory Modules by Multi-level Motif and mRNA Expression Analysis. BIOCOMP 2008: 23-28 - [c57]Ting Gong, Jianhua Xuan, Rebecca B. Riggins, Yue Joseph Wang, Eric P. Hoffman, Robert Clarke:
Exploring Transcriptional Modules Through Integrative Gene Clustering Guided by Transcription Factor Binding Information. BIOCOMP 2008: 191-197 - [c56]Tsung-Han Chan, Wing-Kin Ma, Chong-Yung Chi, Yue Joseph Wang:
Blind separation of non-negative sources by convex analysis: Effective method using linear programming. ICASSP 2008: 3493-3496 - [c55]Bin Zhou, Jianhua Xuan, Qingrong Wu, Yue Joseph Wang:
3-D Deformation Guided On-Line Modification of Multi-leaf Collimators for Adaptive Radiation Therapy. ICIAR 2008: 798-806 - [c54]Li Chen, Jianhua Xuan, Yue Joseph Wang, Rebecca B. Riggins, Robert Clarke:
Network-Constrained Support Vector Machine for Classification. ICMLA 2008: 60-65 - [c53]