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Keiichiro Ono
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2020 – today
- 2023
- [j9]Rudolf T. Pillich, Jing Chen, Christopher Churas, Dylan Fong, Benjamin M. Gyori, Trey Ideker, Klas Karis, Sophie N. Liu
, Keiichiro Ono, Alexander R. Pico, Dexter Pratt:
NDEx IQuery: a multi-method network gene set analysis leveraging the Network Data Exchange. Bioinform. 39(3) (2023)
2010 – 2019
- 2018
- [i5]Barry Demchak
, David Otasek, Alexander R. Pico
, Gary D. Bader
, Keiichiro Ono, Brett Settle, Eric Sage, John H. Morris
, William J. R. Longabaugh, Christian Tannus Lopes, Michael Kucera, Adam Treister
, Benno Schwikowski, Piet Molenaar, Trey Ideker
:
The Cytoscape Automation app article collection. F1000Research 7: 800 (2018) - 2015
- [j8]Georg Summer, Thomas Kelder, Keiichiro Ono, Marijana Radonjic, Stephane Heymans
, Barry Demchak
:
cyNeo4j: connecting Neo4j and Cytoscape. Bioinform. 31(23): 3868-3869 (2015) - [i4]Keiichiro Ono, Tanja Muetze, Georgi Kolishovski, Paul Shannon, Barry Demchak
:
CyREST: Turbocharging Cytoscape Access for External Tools via a RESTful API. F1000Research 4: 478 (2015) - 2014
- [j7]Janusz Dutkowski, Keiichiro Ono, Michael Kramer
, Michael Yu, Dexter Pratt, Barry Demchak
, Trey Ideker
:
NeXO Web: the NeXO ontology database and visualization platform. Nucleic Acids Res. 42(Database-Issue): 1269-1274 (2014) - [i3]Alexander R. Pico
, Gary D. Bader
, Barry Demchak
, Oriol Guitart Pla, Timothy Hull, William J. R. Longabaugh, Christian Tannus Lopes, Samad Lotia, Piet Molenaar, Jason Montojo, John H. Morris
, Keiichiro Ono, Benno Schwikowski
, David Welker, Trey Ideker
:
The Cytoscape app article collection. F1000Research 3: 138 (2014) - [i2]Keiichiro Ono
, Barry Demchak
, Trey Ideker:
Cytoscape tools for the web age: D3.js and Cytoscape.js exporters. F1000Research 3: 143 (2014) - [i1]Kozo Nishida
, Keiichiro Ono, Shigehiko Kanaya, Koichi Takahashi:
KEGGscape: a Cytoscape app for pathway data integration. F1000Research 3: 144 (2014) - 2013
- [j6]Noemi del-Toro
, Marine Dumousseau, Sandra E. Orchard
, Rafael C. Jiménez
, Eugenia Galeota
, Guillaume Launay
, Johannes Goll, Karin Breuer, Keiichiro Ono, Lukasz Salwínski
, Henning Hermjakob
:
A new reference implementation of the PSICQUIC web service. Nucleic Acids Res. 41(Webserver-Issue): 601-606 (2013) - 2011
- [j5]Michael E. Smoot, Keiichiro Ono, Johannes Ruscheinski, Peng-Liang Wang, Trey Ideker
:
Cytoscape 2.8: new features for data integration and network visualization. Bioinform. 27(3): 431-432 (2011) - [j4]Michael E. Smoot, Keiichiro Ono, Trey Ideker
, Steven Maere
:
PiNGO: a Cytoscape plugin to find candidate genes in biological networks. Bioinform. 27(7): 1030-1031 (2011) - [j3]Toshiaki Katayama, Mark D. Wilkinson
, Rutger A. Vos
, Takeshi Kawashima, Shuichi Kawashima
, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi
, Shin Kawano
, Jan Aerts
, Kiyoko F. Aoki-Kinoshita
, Kazuharu Arakawa
, Bruno Aranda, Raoul Jean Pierre Bonnal
, José María Fernández
, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd W. Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo
, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga
, Vachiranee Limviphuvadh
, E. Luke McCarthy, Yasukazu Nakamura
, Yunsun Nam, Kozo Nishida
, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda
, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas H. Putnam
, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi:
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. J. Biomed. Semant. 2: 4 (2011) - 2010
- [j2]Konstantin Pentchev, Keiichiro Ono, Ralf Herwig
, Trey Ideker
, Atanas Kamburov
:
Evidence mining and novelty assessment of protein-protein interactions with the ConsensusPathDB plugin for Cytoscape. Bioinform. 26(21): 2796-2797 (2010) - [j1]Toshiaki Katayama, Kazuharu Arakawa, Mitsuteru Nakao, Keiichiro Ono, Kiyoko F. Aoki-Kinoshita
, Yasunori Yamamoto, Atsuko Yamaguchi
, Shuichi Kawashima
, Hong-Woo Chun, Jan Aerts
, Bruno Aranda, Lord H. Barboza, Raoul Jean Pierre Bonnal
, Richard M. Bruskiewich, Jan Christian Bryne, José María Fernández
, Akira Funahashi
, Paul M. K. Gordon, Naohisa Goto, Andreas Groscurth, Alex Gutteridge
, Richard C. G. Holland
, Yoshinobu Kano
, Edward A. Kawas, Arnaud Kerhornou
, Eri Kibukawa, Akira R. Kinjo
, Michael Kuhn, Hilmar Lapp
, Heikki Lehväslaiho
, Hiroyuki Nakamura, Yasukazu Nakamura
, Tatsuya Nishizawa, Chikashi Nobata, Tamotsu Noguchi, Thomas M. Oinn, Shinobu Okamoto, Stuart Owen, Evangelos Pafilis, Matthew R. Pocock, Pjotr Prins
, René Ranzinger, Florian Reisinger, Lukasz Salwínski
, Mark J. Schreiber, Martin Senger, Yasumasa Shigemoto, Daron M. Standley, Hideaki Sugawara, Toshiyuki Tashiro, Oswaldo Trelles
, Rutger A. Vos
, Mark D. Wilkinson
, William S. York, Christian M. Zmasek
, Kiyoshi Asai, Toshihisa Takagi:
The DBCLS BioHackathon: standardization and interoperability for bioinformatics web services and workflows. J. Biomed. Semant. 1: 8 (2010)
Coauthor Index
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last updated on 2024-08-05 21:24 CEST by the dblp team
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