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ORCIDJaroslaw Meller
Person information
- affiliation: Nicolaus Copernicus University, Department of Informatics, Poland
- affiliation: University of Cincinnati, USA
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Journal Articles
- 2020
[j14]Behrouz Shamsaei, Szymon Chojnacki, Marcin Pilarczyk, Mehdi Fazel-Najafabadi, Wen Niu, Chuming Chen
, Karen Ross, Andrea Matlock, Jeremy Muhlich, Somchai Chutipongtanate, Jie Zheng, John Turner, Dusica Vidovic, Jake Jaffe, Michael J. MacCoss, Cathy Wu, Ajay Pillai, Avi Ma'ayan, Stephan C. Schürer, Michal Kouril, Mario Medvedovic, Jarek Meller:
piNET: a versatile web platform for downstream analysis and visualization of proteomics data. Nucleic Acids Res. 48(Webserver-Issue): W85-W93 (2020)- 2018
- [j13]Amar Koleti, Raymond Terryn, Vasileios Stathias, Caty Chung, Daniel J. Cooper, John Paul Turner, Dusica Vidovic, Michele Forlin, Tanya T. Kelley, Alessandro D'Urso, Bryce K. Allen, Denis Torre, Kathleen M. Jagodnik, Lily Wang, Sherry L. Jenkins, Christopher Mader, Wen Niu, Mehdi Fazel, Naim Al Mahi, Marcin Pilarczyk, Nicholas A. Clark, Behrouz Shamsaei, Jarek Meller, Juozas Vasiliauskas, John Reichard, Mario Medvedovic, Avi Ma'ayan, Ajay Pillai, Stephan C. Schürer:
Data Portal for the Library of Integrated Network-based Cellular Signatures (LINCS) program: integrated access to diverse large-scale cellular perturbation response data. Nucleic Acids Res. 46(Database-Issue): D558-D566 (2018) - 2016
- [j12]Rafal Adamczak, Jarek Meller:
UQlust: combining profile hashing with linear-time ranking for efficient clustering and analysis of big macromolecular data. BMC Bioinform. 17: 546:1-546:8 (2016) - 2012
- [j11]Wlodzislaw Duch, Wieslaw Nowak, Jaroslaw Meller, Grzegorz Osinski, Krzysztof Dobosz, Dariusz Mikolajewski, Grzegorz M. Wójcik:
Computational Approach to Understanding autism Spectrum disorders. Comput. Sci. 13(2): 47-62 (2012) - [j10]Samuel H. Huang, Dengyao Mo, Jarek Meller, Michael Wagner:
Identifying a small set of marker genes using minimum expected cost of misclassification. Artif. Intell. Medicine 55(1): 51-59 (2012) - 2011
- [j9]Rafal Adamczak, Jaroslaw Pillardy, Brinda K. Vallat, Jaroslaw Meller:
Fast Geometric Consensus Approach for Protein Model Quality Assessment. J. Comput. Biol. 18(12): 1807-1818 (2011) - 2010
- [j8]Aleksey A. Porollo, Jaroslaw Meller:
POLYVIEW-MM: web-based platform for animation and analysis of molecular simulations. Nucleic Acids Res. 38(Web-Server-Issue): 662-666 (2010) - 2007
- [j7]Aleksey A. Porollo, Jaroslaw Meller:
Versatile annotation and publication quality visualization of protein complexes using POLYVIEW-3D. BMC Bioinform. 8 (2007) - [j6]Amit U. Sinha, Jaroslaw Meller:
Cinteny: flexible analysis and visualization of synteny and genome rearrangements in multiple organisms. BMC Bioinform. 8 (2007) - 2006
- [j5]Baoqiang Cao, Aleksey A. Porollo, Rafal Adamczak, Mark Jarrell, Jaroslaw Meller:
Enhanced recognition of protein transmembrane domains with prediction-based structural profiles. Bioinform. 22(3): 303-309 (2006) - 2005
- [j4]Michael Wagner, Rafal Adamczak, Aleksey A. Porollo, Jaroslaw Meller:
Linear Regression Models for Solvent Accessibility Prediction in Proteins. J. Comput. Biol. 12(3): 355-369 (2005) - 2004
- [j3]Aleksey A. Porollo, Rafal Adamczak, Jaroslaw Meller:
POLYVIEW: a flexible visualization tool for structural and functional annotations of proteins. Bioinform. 20(15): 2460-2462 (2004) - [j2]Michael Wagner, Jaroslaw Meller, Ron Elber:
Large-scale linear programming techniques for the design of protein folding potentials. Math. Program. 101(2): 301-318 (2004) - 2002
- [j1]Jaroslaw Meller, Michael Wagner, Ron Elber:
Maximum feasibility guideline in the design and analysis of protein folding potentials. J. Comput. Chem. 23(1): 111-118 (2002)
Conference and Workshop Papers
- 2010
- [c5]Mukta Phatak, Jaroslaw Meller:
Model Quality Assessment in Membrane Proteins Using predicted Lipid Accessibility Profiles. ISAIM 2010 - 2009
- [c4]Karthikeyan Swaminathan, Jaroslaw Meller:
Assessment of One- and Two-Class SVMs in the Prediction of Phosphorylation in Proteins. BIOCOMP 2009: 37-42 - [c3]Roman Petrenko, Matthew Dickerson, Rajesh Naik, Soumya Patnaik, Thomas Beck, Jaroslaw Meller:
Entropic Force in Drosophila Resilin: Molecular Dynamics Study. BIOCOMP 2009: 598-603 - 2008
- [c2]Amit U. Sinha, Jaroslaw Meller:
Sensitivity Analysis for Reversal Distance and Breakpoint Reuse in Genome Rearrangements. Pacific Symposium on Biocomputing 2008: 37-48 - 2007
- [c1]Aleksey A. Porollo, Baoqiang Cao, Jaroslaw Meller:
Biases in Lipid Accessibility Prediction Can Be Used for the Recognition of Protein Interaction Interfaces in Soluble Proteins. BIOCOMP 2007: 439-445
Coauthor Index
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