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Books and Theses
- 2005
[b1]Ole Lund, Morten Nielsen, Claus Lundegaard, Can Kesmir, Søren Brunak:
Immunological bioinformatics. Computational molecular biology, AAAI Press 2005, ISBN 978-0-262-12280-1, pp. I-XII, 1-296
Journal Articles
- 2020
- [j8]Dmitry V. Bagaev, Renske M. A. Vroomans, Jerome Samir
, Ulrik Stervbo, Cristina Rius, Garry Dolton, Alexander Greenshields-Watson, Meriem Attaf, Evgeny S. Egorov, Ivan V. Zvyagin, Nina Babel, David K. Cole, Andrew J. Godkin, Andrew K. Sewell, Can Kesmir, Dmitry M. Chudakov, Fabio Luciani, Mikhail Shugay:
VDJdb in 2019: database extension, new analysis infrastructure and a T-cell receptor motif compendium. Nucleic Acids Res. 48(Database-Issue): D1057-D1062 (2020) - 2018
- [j7]Mikhail Shugay, Dmitriy V. Bagaev, Ivan V. Zvyagin, Renske M. A. Vroomans, Jeremy Chase Crawford, Garry Dolton, Ekaterina Komech, Anastasiya L. Sycheva, Anna E. Koneva, Evgeniy S. Egorov, Alexey V. Eliseev, Ewald van Dyk, Pradyot Dash, Meriem Attaf, Cristina Rius, Kristin Ladell, James E. McLaren, Katherine K. Matthews, E. Bridie Clemens, Daniel C. Douek, Fabio Luciani, Debbie van Baarle, Katherine Kedzierska, Can Kesmir, Paul G. Thomas, David A. Price, Andrew K. Sewell, Dmitry M. Chudakov:
VDJdb: a curated database of T-cell receptor sequences with known antigen specificity. Nucleic Acids Res. 46(Database-Issue): D419-D427 (2018) - 2013
- [j6]Jorg J. A. Calis, Matt Maybeno, Jason A. Greenbaum, Daniela Weiskopf, Aruna D. De Silva, Alessandro Sette, Can Kesmir, Björn Peters:
Properties of MHC Class I Presented Peptides That Enhance Immunogenicity. PLoS Comput. Biol. 9(10) (2013) - [j5]Paola Carrillo-Bustamante, Can Kesmir, Rob J. De Boer:
Virus Encoded MHC-Like Decoys Diversify the Inhibitory KIR Repertoire. PLoS Comput. Biol. 9(10) (2013) - 2012
- [j4]Jorg J. A. Calis, Rob J. De Boer, Can Kesmir:
Degenerate T-cell Recognition of Peptides on MHC Molecules Creates Large Holes in the T-cell Repertoire. PLoS Comput. Biol. 8(3) (2012) - [j3]Ilka Hoof, Debbie van Baarle, William H. Hildebrand, Can Kesmir:
Proteome Sampling by the HLA Class I Antigen Processing Pathway. PLoS Comput. Biol. 8(5) (2012) - [j2]Rafal Mostowy, Roger D. Kouyos, Ilka Hoof, Trevor Hinkley, Mojgan Haddad, Jeannette M. Whitcomb, Christos J. Petropoulos, Can Kesmir, Sebastian Bonhoeffer:
Estimating the Fitness Cost of Escape from HLA Presentation in HIV-1 Protease and Reverse Transcriptase. PLoS Comput. Biol. 8(5) (2012) - 2007
- [j1]Claus Lundegaard, Ole Lund, Can Kesmir, Søren Brunak, Morten Nielsen:
Modeling the adaptive immune system: predictions and simulations. Bioinform. 23(24): 3265-3275 (2007)
Coauthor Index
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