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Nathalie Théret
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Journal Articles
- 2023
- [j9]Olivier Dennler, François Coste
, Samuel Blanquart, Catherine Belleannée, Nathalie Théret
:
Phylogenetic inference of the emergence of sequence modules and protein-protein interactions in the ADAMTS-TSL family. PLoS Comput. Biol. 19(8) (2023) - 2022
- [j8]Pierre Vignet, Jean Coquet
, Sébastien Auber, Matéo Boudet
, Anne Siegel
, Nathalie Théret:
Discrete modeling for integration and analysis of large-scale signaling networks. PLoS Comput. Biol. 18(6) (2022) - 2021
- [j7]Maël Conan, Nathalie Théret, Sophie Langouet
, Anne Siegel
:
Constructing xenobiotic maps of metabolism to predict enzymes catalyzing metabolites capable of binding to DNA. BMC Bioinform. 22-S(3): 450 (2021) - 2020
- [j6]Maxime Folschette
, Vincent Legagneux
, Arnaud Poret, Lokmane Chebouba
, Carito Guziolowski, Nathalie Théret
:
A pipeline to create predictive functional networks: application to the tumor progression of hepatocellular carcinoma. BMC Bioinform. 21(1): 18 (2020) - 2016
- [j5]Satya Swarup Samal
, Aurélien Naldi
, Dima Grigoriev, Andreas Weber, Nathalie Théret
, Ovidiu Radulescu
:
Geometric analysis of pathways dynamics: Application to versatility of TGF-β receptors. Biosyst. 149: 3-14 (2016) - [j4]Marie-Amandine Laurent, Dominique Bonnier, Nathalie Théret
, Pierre Tufféry
, Gautier Moroy
:
In silico characterization of the interaction between LSKL peptide, a LAP-TGF-beta derived peptide, and ADAMTS1. Comput. Biol. Chem. 61: 155-161 (2016) - 2014
- [j3]Geoffroy Andrieux
, Michel Le Borgne, Nathalie Théret
:
An integrative modeling framework reveals plasticity of TGF-β signaling. BMC Syst. Biol. 8: 30 (2014) - 2011
- [j2]Jeremy Gruel, Michel Le Borgne, Nolwenn LeMeur, Nathalie Théret
:
Simple Shared Motifs (SSM) in conserved region of promoters: a new approach to identify co-regulation patterns. BMC Bioinform. 12: 365 (2011) - 2008
- [j1]Antony Le Béchec, Pierre-Joachim Zindy, Thomas Sierocinski, Dimitri Petritis, Audrey Bihouée, Nolwenn LeMeur, Jean Léger, Nathalie Théret:
M@IA: A Modular Open-Source Application for Microarray Workflow and Integrative Datamining. Silico Biol. 8(1): 63-69 (2008)
Conference and Workshop Papers
- 2018
- [c3]Pierre Boutillier, Ferdinanda Camporesi, Jean Coquet
, Jérôme Feret, Kim Quyên Lý, Nathalie Théret
, Pierre Vignet:
KaSa: A Static Analyzer for Kappa. CMSB 2018: 285-291 - 2017
- [c2]Jean Coquet
, Nathalie Théret
, Vincent Legagneux
, Olivier Dameron
:
Identifying Functional Families of Trajectories in Biological Pathways by Soft Clustering: Application to TGF-β Signaling. CMSB 2017: 91-107 - 2015
- [c1]Loïc Paulevé, Nathalie Théret
:
Preface. SASB 2015: 1-2
Parts in Books or Collections
- 2007
- [p1]Thomas Sierocinski, Antony Le Béchec, Nathalie Théret
, Dimitri Petritis:
Semantic Distillation: A Method for Clustering Objects by their Contextual Specificity. NICSO 2007: 431-442
Editorship
- 2016
- [e1]Loïc Paulevé, Nathalie Théret:
6th International Workshop on Static Analysis and Systems Biology, SASB 2015, Saint-Malo, France, September 8, 2015. Electronic Notes in Theoretical Computer Science 326, Elsevier 2016 [contents]
Informal and Other Publications
- 2007
- [i1]Thomas Sierocinski, Antony Le Béchec, Nathalie Théret, Dimitri Petritis:
Semantic distillation: a method for clustering objects by their contextual specificity. CoRR abs/0710.1203 (2007)
Coauthor Index
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