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Alan Veliz-Cuba
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2020 – today
- 2024
- [j17]Elena S. Dimitrova
, Cameron H. Fredrickson, Nicholas A. Rondoni
, Brandilyn Stigler
, Alan Veliz-Cuba
:
Algebraic Experimental Design: Theory and Computation. SIAM J. Appl. Algebra Geom. 8(2): 284-301 (2024) - [j16]Alan Veliz-Cuba, Vanessa Newsome-Slade, Elena S. Dimitrova
:
A Unified Approach to Reverse Engineering and Data Selection for Unique Network Identification. SIAM J. Appl. Dyn. Syst. 23(1): 592-615 (2024) - 2022
- [j15]David Murrugarra, Alan Veliz-Cuba
:
An information theoretic approach for the inference of Boolean networks and functions from data: BoCSE. Patterns 3(11): 100617 (2022)
2010 – 2019
- 2019
- [j14]Alan Veliz-Cuba
, Reinhard C. Laubenbacher
:
Dynamics of semilattice networks with strongly connected dependency graph. Autom. 99: 167-174 (2019) - 2017
- [j13]Adrian E. Radillo, Alan Veliz-Cuba
, Kresimir Josic, Zachary P. Kilpatrick:
Evidence Accumulation and Change Rate Inference in Dynamic Environments. Neural Comput. 29(6): 1561-1610 (2017) - [j12]Mehdi Sadeghpour, Alan Veliz-Cuba
, Gábor Orosz, Kresimir Josic, Matthew R. Bennett:
Bistability and oscillations in co-repressive synthetic microbial consortia. Quant. Biol. 5(1): 55-66 (2017) - 2016
- [j11]David Murrugarra
, Alan Veliz-Cuba
, Boris Aguilar, Reinhard C. Laubenbacher
:
Identification of control targets in Boolean molecular network models via computational algebra. BMC Syst. Biol. 10: 94 (2016) - [j10]Alan Veliz-Cuba
, Zachary P. Kilpatrick
, Kresimir Josic:
Stochastic Models of Evidence Accumulation in Changing Environments. SIAM Rev. 58(2): 264-289 (2016) - [i3]Alan Veliz-Cuba, Lauren Geiser:
The Number of Fixed Points of AND-OR Networks with Chain Topology. CoRR abs/1609.02526 (2016) - 2015
- [j9]Alan Veliz-Cuba
, Harel Z. Shouval, Kresimir Josic, Zachary P. Kilpatrick
:
Networks that learn the precise timing of event sequences. J. Comput. Neurosci. 39(3): 235-254 (2015) - [j8]Alan Veliz-Cuba
, Andrew J. Hirning
, Adam A. Atanas, Faiza Hussain, Flavia Vancia, Kresimir Josic, Matthew R. Bennett
:
Sources of Variability in a Synthetic Gene Oscillator. PLoS Comput. Biol. 11(12) (2015) - 2014
- [j7]Alan Veliz-Cuba
, Boris Aguilar, Franziska Hinkelmann, Reinhard C. Laubenbacher
:
Steady state analysis of Boolean molecular network models via model reduction and computational algebra. BMC Bioinform. 15: 221 (2014) - [j6]Alan Veliz-Cuba
, David Murrugarra
, Reinhard C. Laubenbacher:
Structure and dynamics of acyclic networks. Discret. Event Dyn. Syst. 24(4): 647-658 (2014) - [c1]Alan Veliz-Cuba
, Boris Aguilar, Reinhard C. Laubenbacher:
Dimension Reduction of Large Sparse AND-NOT Network Models. SASB 2014: 83-95 - [p1]Reinhard C. Laubenbacher, Franziska Hinkelmann, David Murrugarra
, Alan Veliz-Cuba
:
Algebraic Models and Their Use in Systems Biology. Discrete and Topological Models in Molecular Biology 2014: 443-474 - 2013
- [i2]Alan Veliz-Cuba, Reinhard C. Laubenbacher, Boris Aguilar:
Dimension Reduction of Large AND-NOT Network Models. CoRR abs/1311.6868 (2013) - 2012
- [j5]David Murrugarra
, Alan Veliz-Cuba
, Boris Aguilar, Seda Arat
, Reinhard C. Laubenbacher
:
Modeling stochasticity and variability in gene regulatory networks. EURASIP J. Bioinform. Syst. Biol. 2012: 5 (2012) - [j4]Alan Veliz-Cuba
:
An Algebraic Approach to Reverse Engineering Finite Dynamical Systems Arising from Biology. SIAM J. Appl. Dyn. Syst. 11(1): 31-48 (2012) - 2011
- [j3]Franziska Hinkelmann, Madison Brandon, Bonny Guang, Rustin McNeill, Grigoriy Blekherman
, Alan Veliz-Cuba
, Reinhard C. Laubenbacher
:
ADAM: Analysis of Discrete Models of Biological Systems Using Computer Algebra. BMC Bioinform. 12: 295 (2011) - [j2]Alan Veliz-Cuba
, Brandilyn Stigler
:
Boolean Models Can Explain Bistability in the lac Operon. J. Comput. Biol. 18(6): 783-794 (2011) - [i1]Alan Veliz-Cuba, Joseph Arthur, Laura Hochstetler, Victoria Klomps, Erikka Korpi:
On the relationship of steady states of continuous and discrete models. CoRR abs/1109.5197 (2011) - 2010
- [j1]Alan Veliz-Cuba
, Abdul Salam Jarrah
, Reinhard C. Laubenbacher
:
Polynomial algebra of discrete models in systems biology. Bioinform. 26(13): 1637-1643 (2010)
Coauthor Index
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last updated on 2024-08-05 21:17 CEST by the dblp team
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