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Lars Ailo Bongo
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2020 – today
- 2024
- [i22]Nikita Shvetsov, Anders Sildnes, Lill-Tove Rasmussen Busund, Stig Dalen, Kajsa Møllersen, Lars Ailo Bongo, Thomas K. Kilvaer:
Fast TILs estimation in lung cancer WSIs based on semi-stochastic patch sampling. CoRR abs/2405.02913 (2024) - [i21]Bjørn-Richard Pedersen, Maisha Islam, Doris Tove Kristoffersen, Lars Ailo Bongo, Eilidh Garrett, Alice Reid, Hilde L. Sommerseth:
Coding historical causes of death data with Large Language Models. CoRR abs/2405.07560 (2024) - 2023
- [i20]Masoud Tafavvoghi, Lars Ailo Bongo, Nikita Shvetsov, Lill-Tove Rasmussen Busund, Kajsa Møllersen:
Publicly available datasets of breast histopathology H&E whole-slide images: A systematic review. CoRR abs/2306.01546 (2023) - [i19]Bjørn-Richard Pedersen, Rigmor Katrine Johansen, Einar J. Holsbø, Hilde L. Sommerseth, Lars Ailo Bongo:
More efficient manual review of automatically transcribed tabular data. CoRR abs/2306.16126 (2023) - [i18]Pavitra Chauhan, Mohsen Gamal Saad Askar, Bjørn Fjukstad, Lars Ailo Bongo, Edvard Pedersen:
Interoperable synthetic health data with SyntHIR to enable the development of CDSS tools. CoRR abs/2308.02613 (2023) - 2022
- [c23]Bjørn-Jostein Singstad, Antony M. Gitau, Markus Kreutzer Johnsen, Johan Ravn, Lars Ailo Bongo, Henrik Schirmer:
Phonocardiogram Classification Using 1-Dimensional Inception Time Convolutional Neural Networks. CinC 2022: 1-4 - [i17]Nikita Shvetsov, Morten Grønnesby, Edvard Pedersen, Kajsa Møllersen, Lill-Tove Rasmussen Busund, Ruth Schwienbacher, Lars Ailo Bongo, Thomas K. Kilvaer:
A Pragmatic Machine Learning Approach to Quantify Tumor Infiltrating Lymphocytes in Whole Slide Images. CoRR abs/2202.06590 (2022) - [i16]Dina Benedicte Stensen, Rafael Adolfo Nozal Cañadas, Lars Småbrekke, Karina Standahl Olsen, Christopher Sivert Nielsen, Kristian Svendsen, Anne Merethe Hanssen, Johanna Sollid, Gunnar Skov Simonsen, Lars Ailo Bongo, Anne-Sofie Furberg:
Social network analysis of Staphylococcus aureus carriage in a general youth population. CoRR abs/2202.08794 (2022) - 2021
- [i15]Bjørn-Richard Pedersen, Einar J. Holsbø, Trygve Andersen, Nikita Shvetsov, Johan Ravn, Hilde Leikny Sommerseth, Lars Ailo Bongo:
Occode: an end-to-end machine learning pipeline for transcription of historical population censuses. CoRR abs/2106.03996 (2021) - [i14]Álvaro Martínez Fernández, Lars Ailo Bongo, Edvard Pedersen:
GeneNet VR: Interactive visualization of large-scale biological networks using a standalone headset. CoRR abs/2109.02937 (2021) - 2020
- [i13]Tengel Ekrem Skar, Einar J. Holsbø, Kristian Svendsen
, Lars Ailo Bongo:
Interactive exploration of population scale pharmacoepidemiology datasets. CoRR abs/2005.09890 (2020)
2010 – 2019
- 2019
- [j9]Cristina Jácome
, Johan Ravn, Einar J. Holsbø
, Juan Carlos Aviles Solis
, Hasse Melbye
, Lars Ailo Bongo
:
Convolutional Neural Network for Breathing Phase Detection in Lung Sounds. Sensors 19(8): 1798 (2019) - [c22]Bjørn Fjukstad, Nina Angelvik, Morten Grønnesby, Maria Wulff Hauglann, Hedinn Gunhildrud, Fredrik Høisæther Rasch, Julianne Iversen, Margaret Dalseng, Lars Ailo Bongo:
Teaching Electronics and Programming in Norwegian Schools Using the air: bit Sensor Kit. ITiCSE 2019: 374-380 - [c21]Bjørn Fjukstad, Vanessa Dumeaux, Michael T. Hallett
, Lars Ailo Bongo:
Reproducible Data Analysis Pipelines for Precision Medicine. PDP 2019: 299-306 - [i12]Bjørn Fjukstad, Nina Angelvik, Morten Grønnesby, Maria Wulff Hauglann, Hedinn Gunhildrud, Fredrik Høisæther Rasch, Julianne Iversen, Margaret Dalseng, Lars Ailo Bongo:
Teaching Electronics and Programming in Norwegian Schools Using the air: bit Sensor Kit. CoRR abs/1901.05240 (2019) - [i11]Cristina Jácome, Johan Ravn, Einar J. Holsbø, Juan Carlos Aviles Solis, Hasse Melbye, Lars Ailo Bongo:
Convolutional neural network for breathing phase detection in lung sounds. CoRR abs/1903.10251 (2019) - 2018
- [c20]Bjørn Fjukstad, Nina Angelvik, Maria Wulff Hauglann, Joachim Sveia Knutsen, Morten Grønnesby, Hedinn Gunhildrud, Lars Ailo Bongo:
Low-Cost Programmable Air Quality Sensor Kits in Science Education. SIGCSE 2018: 227-232 - [i10]Mike Voets, Kajsa Møllersen, Lars Ailo Bongo:
Replication study: Development and validation of deep learning algorithm for detection of diabetic retinopathy in retinal fundus photographs. CoRR abs/1803.04337 (2018) - [i9]Inge Alexander Raknes, Lars Ailo Bongo
:
META-pipe Authorization service. F1000Research 7: 32 (2018) - [i8]Kidane M. Tekle, Sveinung Gundersen
, Kjetil Klepper, Lars Ailo Bongo
, Inge Alexander Raknes, Xiaxi Li, Wei Zhang, Christian Andreetta, Teshome Dagne Mulugeta, Matús Kalas
, Morten B. Rye, Erik Hjerde
, Jeevan Karloss Antony Samy, Ghislain Fornous, Abdulrahman Azab, Dag Inge Våge
, Eivind Hovig
, Nils Peder Willassen
, Finn Drabløs
, Ståle Nygård
, Kjell Petersen, Inge Jonassen
:
Norwegian e-Infrastructure for Life Sciences (NeLS). F1000Research 7: 968 (2018) - 2017
- [j8]Bjørn Fjukstad, Lars Ailo Bongo
:
A Review of Scalable Bioinformatics Pipelines. Data Sci. Eng. 2(3): 245-251 (2017) - [j7]Edvard Pedersen, Lars Ailo Bongo:
Large-scale biological meta-database management. Future Gener. Comput. Syst. 67: 481-489 (2017) - [j6]Vanessa Dumeaux
, Bjørn Fjukstad, Hans E. Fjosne, Jan-Ole Frantzen, Marit Muri Holmen
, Enno Rodegerdts, Ellen Schlichting, Anne-Lise Børresen-Dale, Lars Ailo Bongo
, Eiliv Lund
, Michael T. Hallett
:
Interactions between the tumor and the blood systemic response of breast cancer patients. PLoS Comput. Biol. 13(9) (2017) - [c19]Bjørn Fjukstad, Vanessa Dumeaux, Karina Standahl Olsen, Eiliv Lund
, Michael T. Hallett
, Lars Ailo Bongo:
Building Applications for Interactive Data Exploration in Systems Biology. BCB 2017: 556-561 - [c18]Inge Alexander Raknes, Bjørn Fjukstad, Lars Ailo Bongo:
nsroot: Minimalist process isolation tool implemented with Linux namespaces. NIK 2017 - [i7]Morten Grønnesby, Juan Carlos Aviles Solis, Einar J. Holsbø, Hasse Melbye, Lars Ailo Bongo:
Machine Learning Based Crackle Detection in Lung Sounds. CoRR abs/1706.00005 (2017) - [i6]Espen Mikal Robertsen
, Hubert Denise
, Alex L. Mitchell
, Robert D. Finn
, Lars Ailo Bongo, Nils Peder Willassen
:
ELIXIR pilot action: Marine metagenomics - towards a domain specific set of sustainable services. F1000Research 6: 70- (2017) - [i5]Aleksandr Agafonov, Kimmo Mattila, Cuong Duong Tuan, Lars Tiede, Inge Alexander Raknes, Lars Ailo Bongo:
META-pipe cloud setup and execution. F1000Research 6: 2060- (2017) - 2016
- [p1]Edvard Pedersen, Lars Ailo Bongo:
Big Biological Data Management. Resource Management for Big Data Platforms 2016: 265-277 - [i4]Espen Mikal Robertsen, Tim Kahlke
, Inge Alexander Raknes, Edvard Pedersen, Erik Kjærner-Semb, Martin Ernstsen, Lars Ailo Bongo, Nils Peder Willassen:
META-pipe - Pipeline Annotation, Analysis and Visualization of Marine Metagenomic Sequence Data. CoRR abs/1604.04103 (2016) - [i3]Inge Alexander Raknes, Bjørn Fjukstad, Lars Ailo Bongo:
nsroot: Minimalist Process Isolation Tool Implemented With Linux Namespaces. CoRR abs/1609.03750 (2016) - 2015
- [j5]Milan Mihajlovic, Lars Ailo Bongo, Raimondas Ciegis, Neki Frasheri, Dragi Kimovski
, Peter G. Kropf
, Svetozar Margenov, Maya G. Neytcheva, Thomas Rauber, Gudula Rünger, Roman Trobec, Roel Wuyts
, Roman Wyrzykowski
, Jing Gong:
Applications for ultrascale computing. Supercomput. Front. Innov. 2(1): 19-48 (2015) - [c17]Ove Kåven, Lars Ailo Bongo:
MORTAL - Multiparadigm Optimizing Retargetable Transdisciplinary Abstraction Language. NIK 2015 - [c16]Edvard Pedersen, Inge Alexander Raknes, Martin Ernstsen, Lars Ailo Bongo:
Integrating Data-Intensive Computing Systems with Biological Data Analysis Frameworks. PDP 2015: 733-740 - [i2]Edvard Pedersen, Lars Ailo Bongo:
Large-scale Biological Meta-Database Management. CoRR abs/1503.07759 (2015) - [i1]Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo
:
Kvik: three-tier data exploration tools for flexible analysis of genomic data in epidemiological studies. F1000Research 4: 81 (2015) - 2014
- [c15]Lars Ailo Bongo, Edvard Pedersen, Martin Ernstsen:
Data-Intensive Computing Infrastructure Systems for Unmodified Biological Data Analysis Pipelines. CIBB 2014: 259-272 - [c14]Martin Ernstsen, Erik Kjærner-Semb, Nils Peder Willassen, Lars Ailo Bongo:
Mario: Interactive Tuning of Biological Analysis Pipelines Using Iterative Processing. Euro-Par Workshops (1) 2014: 263-274 - [c13]Bjørn Fjukstad, Karina Standahl Olsen, Mie Jareid, Eiliv Lund, Lars Ailo Bongo:
Kvik: Interactive exploration of genomic data from the NOWAC postgenome biobank. NIK 2014 - [c12]Giacomo Tartari, Lars Tiede, Einar J. Holsbø, Kenneth Knudsen
, Inge Alexander Raknes, Bjørn Fjukstad, Nicolle Mode
, John Markus Bjørndalen, Eiliv Lund
, Lars Ailo Bongo:
Mr. Clean: A Tool for Tracking and Comparing the Lineage of Scientific Visualization Code. VISSOFT 2014: 75-78 - 2013
- [j4]Christopher Y. Park, Aaron K. Wong
, Casey S. Greene
, Jessica Rowland, Yuanfang Guan
, Lars Ailo Bongo, Rebecca D. Burdine
, Olga G. Troyanskaya
:
Functional Knowledge Transfer for High-accuracy Prediction of Under-studied Biological Processes. PLoS Comput. Biol. 9(3) (2013) - [c11]Edvard Pedersen, Nils Peder Willassen, Lars Ailo Bongo:
Transparent Incremental Updates for Genomics Data Analysis Pipelines. Euro-Par Workshops 2013: 311-320 - [c10]Lars Ailo Bongo:
Bulk synchronous visualization. PMAM 2013: 21-30 - 2012
- [j3]Aaron K. Wong
, Christopher Y. Park, Casey S. Greene
, Lars Ailo Bongo, Yuanfang Guan
, Olga G. Troyanskaya
:
IMP: a multi-species functional genomics portal for integration, visualization and prediction of protein functions and networks. Nucleic Acids Res. 40(Web-Server-Issue): 484-490 (2012) - 2010
- [j2]William K. Josephson, Lars Ailo Bongo, Kai Li, David Flynn:
DFS: A file system for virtualized flash storage. ACM Trans. Storage 6(3): 14:1-14:25 (2010) - [j1]William K. Josephson, Lars Ailo Bongo, David Flynn, Kai Li:
DFS: A File System for Virtualized Flash Storage. login Usenix Mag. 35(2) (2010) - [c9]William K. Josephson, Lars Ailo Bongo, David Flynn, Kai Li:
DFS: A File System for Virtualized Flash Storage. FAST 2010: 85-100
2000 – 2009
- 2006
- [c8]Lars Ailo Bongo, Grant Wallace, Tore Larsen, Kai Li, Olga G. Troyanskaya:
Systems Support for Remote Visualization of Genomics Applications over Wide Area Networks. GCCB 2006: 157-174 - [c7]Lars Ailo Bongo, Brian Vinter, Otto J. Anshus, Tore Larsen, John Markus Bjørndalen:
Using Overdecomposition to Overlap Communication Latencies with Computation and Take Advantage of SMT Processors. ICPP Workshops 2006: 239-247 - 2005
- [c6]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen:
Low Overhead High Performance Runtime Monitoring of Collective Communication. ICPP 2005: 455-464 - 2004
- [c5]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen:
Collective Communication Performance Analysis Within the Communication System. Euro-Par 2004: 163-172 - [c4]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen, Tore Larsen:
Extending Collective Operations with Application Semantics for Improving Multi-Cluster Performance. ISPDC/HeteroPar 2004: 320-327 - 2003
- [c3]Lars Ailo Bongo, Otto J. Anshus, John Markus Bjørndalen:
EventSpace - Exposing and Observing Communication Behavior of Parallel Cluster Applications. Euro-Par 2003: 47-56 - [c2]Otto J. Anshus, John Markus Bjørndalen, Lars Ailo Bongo:
Experiences Parallelizing, Configuring, Monitoring and Visualizing Applications for Clusters and Multi-Clusters. PARCO 2003: 879-886 - 2002
- [c1]John Markus Bjørndalen, Otto J. Anshus, Tore Larsen, Lars Ailo Bongo, Brian Vinter:
Scalable Processing and Communication Performance in a Multi-Media Related Context. EUROMICRO 2002: 200-206
Coauthor Index
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