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ORCIDTommi H. Nyrönen
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Journal Articles
- 2017
[j10]Marco Brandizi
, Olga Melnichuk, Raffael Bild, Florian Kohlmayer, Benedicto Rodriguez-Castro, Helmut Spengler, Klaus A. Kuhn, Wolfgang Kuchinke, Christian Ohmann, Timo Mustonen, Mikael Linden, Tommi H. Nyrönen, Ilkka Lappalainen, Alvis Brazma, Ugis Sarkans:
Orchestrating differential data access for translational research: a pilot implementation. BMC Medical Informatics Decis. Mak. 17(1): 30:1-30:14 (2017)- 2013
- [j9]Allegra Via, Thomas Blicher, Erik Bongcam-Rudloff, Michelle D. Brazas, Catherine Brooksbank, Aidan Budd, Javier De Las Rivas, Jacqueline Dreyer, Pedro L. Fernandes, Celia W. G. van Gelder, Joachim Jacob, Rafael C. Jiménez, Jane E. Loveland, Federico Morán, Nicola J. Mulder, Tommi H. Nyrönen, Kristian Rother, Maria Victoria Schneider, Teresa K. Attwood:
Best practices in bioinformatics training for life scientists. Briefings Bioinform. 14(5): 528-537 (2013) - [j8]Rafael C. Jiménez, Juan P. Albar, Jong Bhak, Marie-Claude Blatter, Thomas Blicher, Michelle D. Brazas, Catherine Brooksbank, Aidan Budd, Javier De Las Rivas, Jacqueline Dreyer, Marc A. van Driel, Michael J. Dunn, Pedro L. Fernandes, Celia W. G. van Gelder, Henning Hermjakob, Vassilios Ioannidis, David Phillip Judge, Pascal Kahlem, Eija Korpelainen, Hans-Joachim Kraus, Jane E. Loveland, Christine Mayer, Jennifer McDowall, Federico Morán, Nicola J. Mulder, Tommi H. Nyrönen, Kristian Rother, Gustavo A. Salazar, Reinhard Schneider, Allegra Via, Jose M. Villaveces, Ping Yu, Maria Victoria Schneider, Teresa K. Attwood, Manuel Corpas:
iAnn: an event sharing platform for the life sciences. Bioinform. 29(15): 1919-1921 (2013) - 2012
- [j7]Maria Victoria Schneider, Peter Walter, Marie-Claude Blatter, James Watson, Michelle D. Brazas, Kristian Rother, Aidan Budd, Allegra Via, Celia W. G. van Gelder, Joachim Jacob, Pedro L. Fernandes, Tommi H. Nyrönen, Javier De Las Rivas, Thomas Blicher, Rafael C. Jiménez, Jane E. Loveland, Jennifer McDowall, Philip Jones, Brendan W. Vaughan, Rodrigo Lopez, Teresa K. Attwood, Catherine Brooksbank:
Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers. Briefings Bioinform. 13(3): 383-389 (2012) - 2010
- [j6]Maria Victoria Schneider, James Watson, Teresa K. Attwood, Kristian Rother, Aidan Budd, Jennifer McDowall, Allegra Via, Pedro L. Fernandes, Tommi H. Nyrönen, Thomas Blicher, Philip Jones, Marie-Claude Blatter, Javier De Las Rivas, David Phillip Judge, Wouter van der Gool, Catherine Brooksbank:
Bioinformatics training: a review of challenges, actions and support requirements. Briefings Bioinform. 11(6): 544-551 (2010) - 2008
- [j5]Annu A. Soderholm, Johanna Viiliainen, Pekka T. Lehtovuori, Hanna Eskelinen, Daniela Roell, Aria Baniahmad, Tommi H. Nyrönen:
Computationally Identified Novel Diphenyl- and Phenylpyridine Androgen Receptor Antagonist Structures. J. Chem. Inf. Model. 48(9): 1882-1890 (2008) - 2006
- [j4]Pekka T. Lehtovuori, Tommi H. Nyrönen:
SOMA - Workflow for Small Molecule Property Calculations on a Multiplatform Computing Grid. J. Chem. Inf. Model. 46(2): 620-625 (2006) - 2004
- [j3]Jukka V. Lehtonen, Dan-Johan Still, Ville-Veikko Rantanen, Jan Ekholm, Dag Björklund, Zuhair Iftikhar, Mikko Huhtala, Susanna Repo, Antti Jussila, Jussi Jaakkola, Olli T. Pentikäinen, Tommi H. Nyrönen, Tiina Salminen, Mats Gyllenberg, Mark S. Johnson:
BODIL: a molecular modeling environment for structure-function analysis and drug design. J. Comput. Aided Mol. Des. 18(6): 401-419 (2004) - [j2]Anu J. Tervo, Tommi H. Nyrönen, Toni Rönkkö, Antti Poso:
Comparing the Quality and Predictiveness between 3D QSAR Models Obtained from Manual and Automated Alignment. J. Chem. Inf. Model. 44(3): 807-816 (2004) - 2003
- [j1]Anu J. Tervo, Tommi H. Nyrönen, Toni Rönkkö, Antti Poso:
A structure-activity relationship study of catechol-O-methyltransferase inhibitors combining molecular docking and 3D QSAR methods. J. Comput. Aided Mol. Des. 17(12): 797-810 (2003)
Conference and Workshop Papers
- 2012
- [c2]Tommi H. Nyrönen, Jarno Laitinen, Olli Tourunen, Danny Sternkopf, Risto Laurikainen, Per Öster, Pekka T. Lehtovuori, Timo A. Miettinen, Tomi Simonen, Teemu Perheentupa, Imre Vastrik, Olli-P. Kallioniemi, Andrew Lyall, Janet M. Thornton:
Delivering ICT infrastructure for biomedical research. WICSA/ECSA Companion Volume 2012: 37-44 - 2003
- [c1]Matti T. Gröhn, Tommi H. Nyrönen:
Integration and utilization of different visualization methods and devices in a structure-based drug design process. Visualization and Data Analysis 2003: 11-18
Informal and Other Publications
- 2018
- [i1]Mikael Linden, Michal Procházka, Ilkka Lappalainen, Dominik Bucik, Pavel Vyskocil, Martin Kuba, Sami Silén, Peter Belmann, Alexander Sczyrba, Steven J. Newhouse, Ludek Matyska, Tommi H. Nyrönen:
Common ELIXIR Service for Researcher Authentication and Authorisation. F1000Research 7: 1199 (2018)
Coauthor Index
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