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Peter Tarczy-Hornoch
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2020 – today
- 2022
- [j32]Hua Xu, David L. Buckeridge, Fei Wang, Peter Tarczy-Hornoch:
Novel informatics approaches to COVID-19 Research: From methods to applications. J. Biomed. Informatics 129: 104028 (2022) - 2020
- [j31]Nicholas J. Dobbins, Clifford H. Spital, Robert A. Black, Jason M. Morrison, Bas de Veer, Elizabeth Zampino, Robert D. Harrington, Bethene D. Britt, Kari A. Stephens, Adam B. Wilcox, Peter Tarczy-Hornoch, Sean D. Mooney:
Leaf: an open-source, model-agnostic, data-driven web application for cohort discovery and translational biomedical research. J. Am. Medical Informatics Assoc. 27(1): 109-118 (2020)
2010 – 2019
- 2018
- [c31]Ahmad K. Aljadaan, Peter Tarczy-Hornoch, Adam B. Wilcox, Todd F. Dardas, John H. Gennari:
Counting Readmissions: Surprisingly difficult. AMIA 2018 - 2017
- [c30]Wayne H. Liang, Bas de Veer, Diane M. Korngiebel, Annie T. Chen, Gail P. Jarvik, Peter Tarczy-Hornoch, David R. Crosslin:
User-Centered Design of a Collaborative Genetic Variant Interpretation Tool. AMIA 2017 - [c29]Neris M. Nieves-Robbins, Matthew Parry, Andrew Holdaway, Robert C. Marshall, Fredric M. Wolf, Peter Tarczy-Hornoch:
Impact of Predictive Analytics on Clinical Outcomes, Clinical Decision Making, and Healthcare Organization Performance: A Systematic Review. AMIA 2017 - [c28]Chia-Ju Lee, Beth Devine, Peter Tarczy-Hornoch:
A Knowledge-based System for Intelligent Support in Pharmacogenomics Evidence Assessment: Ontology-driven Evidence Representation and Retrieval. CRI 2017 - 2016
- [j30]Casey L. Overby, John J. Connolly, Christopher G. Chute, Joshua C. Denny, Robert R. Freimuth, Andrea L. Hartzler, Ingrid A. Holm, Shannon F. Manzi, Jyotishman Pathak, Peggy L. Peissig, Maureen E. Smith, Marc S. Williams, Brian H. Shirts, Elena M. Stoffel, Peter Tarczy-Hornoch, Carolyn Rohrer Vitek, Wendy A. Wolf, Justin Starren, Luke V. Rasmussen:
Practical considerations for implementing genomic information resources. Appl. Clin. Inform. 07(03): 870-882 (2016) - [j29]Adam A. Nishimura, Brian H. Shirts, Joseph S. Salama, Joe W. Smith, Emily Beth Devine, Peter Tarczy-Hornoch:
Physician perspectives of CYP2C19 and clopidogrel drug-gene interaction active clinical decision support alerts. Int. J. Medical Informatics 86: 117-125 (2016) - [j28]Laura K. Wiley, Peter Tarczy-Hornoch, Joshua C. Denny, Robert R. Freimuth, Casey L. Overby, Nigam Shah, Ross D. Martin, Indra Neil Sarkar:
Harnessing next-generation informatics for personalizing medicine: a report from AMIA's 2014 Health Policy Invitational Meeting. J. Am. Medical Informatics Assoc. 23(2): 413-419 (2016) - [c27]Meliha Yetisgen, Lucy Vanderwende, Tony Black, Sean D. Mooney, Peter Tarczy-Hornoch:
A New Way of Representing Clinical Reports for Rapid Phenotyping. CRI 2016 - 2015
- [j27]Brian H. Shirts, Joseph S. Salama, Samuel J. Aronson, Wendy K. Chung, Stacy W. Gray, Lucia A. Hindorff, Gail P. Jarvik, Sharon E. Plon, Elena M. Stoffel, Peter Tarczy-Hornoch, Eliezer M. Van Allen, Karen E. Weck, Christopher G. Chute, Robert R. Freimuth, Robert Grundmeier, Andrea L. Hartzler, Rongling Li, Peggy L. Peissig, Josh F. Peterson, Luke V. Rasmussen, Justin B. Starren, Marc S. Williams, Casey Lynnette Overby:
CSER and eMERGE: current and potential state of the display of genetic information in the electronic health record. J. Am. Medical Informatics Assoc. 22(6): 1231-1242 (2015) - [j26]Casey Lynnette Overby, Emily Beth Devine, Neil F. Abernethy, Jeannine S. McCune, Peter Tarczy-Hornoch:
Making pharmacogenomic-based prescribing alerts more effective: A scenario-based pilot study with physicians. J. Biomed. Informatics 55: 249-259 (2015) - [c26]Emily Beth Devine, Maher Khelifi, Katelyn Keyloun, Nathaniel Hendrix, Patrick Mathias, Christian Bock, Peter Tarczy-Hornoch:
Characterizing the Frequency of Pharmacogenomic Biomarker-Guided Prescribing for Drugs with Pharmacogenomic Biomarker information in the FDA Labelling: A Pilot Study Using Data from an Electronic Health Record. AMIA 2015 - 2014
- [j25]Emily Beth Devine, Chia-Ju Lee, Casey Lynnette Overby, Neil F. Abernethy, Jeannine McCune, Joe W. Smith, Peter Tarczy-Hornoch:
Usability evaluation of pharmacogenomics clinical decision support aids and clinical knowledge resources in a computerized provider order entry system: A mixed methods approach. Int. J. Medical Informatics 83(7): 473-483 (2014) - [c25]Casey L. Overby, Luke V. Rasmussen, Andrea L. Hartzler, John J. Connolly, Josh F. Peterson, RoseMary Hedberg, Robert R. Freimuth, Brian H. Shirts, Joshua C. Denny, Eric B. Larson, Christopher G. Chute, Gail P. Jarvik, James D. Ralston, Alan R. Shuldiner, Iftikhar J. Kullo, Peter Tarczy-Hornoch, Marc S. Williams:
A Template for Authoring and Adapting Genomic Medicine Content in the eMERGE Infobutton Project. AMIA 2014 - 2012
- [j24]Eithon Cadag, Peter Tarczy-Hornoch, Peter J. Myler:
Learning virulent proteins from integrated query networks. BMC Bioinform. 13: 321 (2012) - [j23]Casey Lynnette Overby, Emily Beth Devine, Peter Tarczy-Hornoch, Ira J. Kalet:
Deriving rules and assertions from pharmacogenomics knowledge resources in support of patient drug metabolism efficacy predictions. J. Am. Medical Informatics Assoc. 19(5): 840-850 (2012) - [j22]Casimir A. Kulikowski, Edward H. Shortliffe, Leanne M. Currie, Peter L. Elkin, Lawrence E. Hunter, Todd R. Johnson, Ira J. Kalet, Leslie A. Lenert, Mark A. Musen, Judy G. Ozbolt, Jack W. Smith, Peter Tarczy-Hornoch, Jeffrey J. Williamson:
AMIA Board white paper: definition of biomedical informatics and specification of core competencies for graduate education in the discipline. J. Am. Medical Informatics Assoc. 19(6): 931-938 (2012) - [j21]Nicholas R. Anderson, Aaron Abend, Aaron Mandel, Estella M. Geraghty, Davera Gabriel, Rob Wynden, Michael Kamerick, Kent Anderson, Julie Rainwater, Peter Tarczy-Hornoch:
Implementation of a deidentified federated data network for population-based cohort discovery. J. Am. Medical Informatics Assoc. 19(e1) (2012) - [c24]Casey Lynnette Overby, Emily Beth Devine, Neil F. Abernethy, Jeannine McCune, Peter Tarczy-Hornoch:
Assessing the effective communication of pharmacogenomics knowledge embedded in the electronic health record for drug therapy individualization. AMIA 2012 - 2011
- [j20]Indra Neil Sarkar, Atul J. Butte, Yves A. Lussier, Peter Tarczy-Hornoch, Lucila Ohno-Machado:
Translational bioinformatics: linking knowledge across biological and clinical realms. J. Am. Medical Informatics Assoc. 18(4): 354-357 (2011) - [j19]Parmit K. Chilana, Elishema Fishman, Estella M. Geraghty, Peter Tarczy-Hornoch, Fredric M. Wolf, Nick R. Anderson:
Characterizing Data Discovery and End-User Computing Needs in Clinical Translational Science. J. Organ. End User Comput. 23(4): 17-30 (2011) - [c23]Casey Lynnette Overby, Peter Tarczy-Hornoch, Jim Hoath, Joe W. Smith, Emily Beth Devine, David A. Fenstermacher:
An Evaluation of Functional and User Interface Requirements for Pharmacogenomic Clinical Decision Support. HISB 2011: 134-141 - 2010
- [j18]Eneida A. Mendonça, Peter Tarczy-Hornoch:
Selected proceedings of the 2010 Summit on Translational Bioinformatics. BMC Bioinform. 11(S-9): S1 (2010) - [j17]Casey Lynnette Overby, Peter Tarczy-Hornoch, Jim Hoath, Ira J. Kalet, David L. Veenstra:
Feasibility of incorporating genomic knowledge into electronic medical records for pharmacogenomic clinical decision support. BMC Bioinform. 11(S-9): S10 (2010) - [j16]Terry H. Shen, Peter Tarczy-Hornoch, Landon Detwiler, Eithon Cadag, Christopher S. Carlson:
Evaluation of probabilistic and logical inference for a SNP annotation system. J. Biomed. Informatics 43(3): 407-418 (2010) - [j15]Eithon Cadag, Peter Tarczy-Hornoch:
Supporting retrieval of diverse biomedical data using evidence-aware queries. J. Biomed. Informatics 43(6): 873-882 (2010) - [j14]Emily Beth Devine, Emily C. Williams, Diane P. Martin, Dean F. Sittig, Peter Tarczy-Hornoch, Thomas H. Payne, Sean D. Sullivan:
Prescriber and staff perceptions of an electronic prescribing system in primary care: a qualitative assessment. BMC Medical Informatics Decis. Mak. 10: 72 (2010)
2000 – 2009
- 2009
- [j13]Casey Lynnette Overby, Peter Tarczy-Hornoch, Dina Demner-Fushman:
The potential for automated question answering in the context of genomic medicine: an assessment of existing resources and properties of answers. BMC Bioinform. 10(S-9): 8 (2009) - [j12]Terry H. Shen, Christopher S. Carlson, Peter Tarczy-Hornoch:
Evaluating the accuracy of a functional SNP annotation system. BMC Bioinform. 10(S-9): 11 (2009) - [j11]Terry H. Shen, Christopher S. Carlson, Peter Tarczy-Hornoch:
SNPit: A federated data integration system for the purpose of functional SNP annotation. Comput. Methods Programs Biomed. 95(2): 181-189 (2009) - [j10]E. Sally Lee, David W. McDonald, Nicholas R. Anderson, Peter Tarczy-Hornoch:
Incorporating collaboratory concepts into informatics in support of translational interdisciplinary biomedical research. Int. J. Medical Informatics 78(1): 10-21 (2009) - [c22]Eithon Cadag, Peter Tarczy-Hornoch, Peter J. Myler:
On the Reachability of Trustworthy Information from Integrated Exploratory Biological Queries. DILS 2009: 55-70 - [c21]Landon Detwiler, Wolfgang Gatterbauer, Brenton Louie, Dan Suciu, Peter Tarczy-Hornoch:
Integrating and Ranking Uncertain Scientific Data. ICDE 2009: 1235-1238 - 2008
- [j9]Joan S. Ash, Nicholas R. Anderson, Peter Tarczy-Hornoch:
Viewpoint Paper: People and Organizational Issues in Research Systems Implementation. J. Am. Medical Informatics Assoc. 15(3): 283-289 (2008) - 2007
- [j8]Nicholas R. Anderson, Joan S. Ash, Peter Tarczy-Hornoch:
A qualitative study of the implementation of a bioinformatics tool in a biological research laboratory. Int. J. Medical Informatics 76(11-12): 821-828 (2007) - [j7]Nicholas R. Anderson, E. Sally Lee, J. Scott Brockenbrough, Mark E. Minie, Sherrilynne S. Fuller, James F. Brinkley, Peter Tarczy-Hornoch:
Research Paper: Issues in Biomedical Research Data Management and Analysis: Needs and Barriers. J. Am. Medical Informatics Assoc. 14(4): 478-488 (2007) - [j6]Peter Tarczy-Hornoch, Mia K. Markey, John A. Smith, Tadaaki Hiruki:
Bio*Medical informatics and genomic medicine: Research and training. J. Biomed. Informatics 40(1): 1-4 (2007) - [j5]Brenton Louie, Peter Mork, Fernando Martín-Sánchez, Alon Y. Halevy, Peter Tarczy-Hornoch:
Data integration and genomic medicine. J. Biomed. Informatics 40(1): 5-16 (2007) - [c20]Eithon Cadag, Brenton Louie, Peter J. Myler, Peter Tarczy-Hornoch:
Biomediator Data Integration and Inference for Functional Annotation of Anonymous Sequences. Pacific Symposium on Biocomputing 2007: 343-354 - [c19]Brenton Louie, Landon Detwiler, Nilesh N. Dalvi, Ron Shaker, Peter Tarczy-Hornoch, Dan Suciu:
Incorporating Uncertainty Metrics into a General-Purpose Data Integration System. SSDBM 2007: 19 - 2006
- [j4]Nicholas R. Anderson, Peter Tarczy-Hornoch, Roger Eugene Bumgarner:
On the persistence of supplementary resources in biomedical publications. BMC Bioinform. 7: 260 (2006) - 2005
- [c18]Sophia Jeng, Kelan Wang, Janos Barbero, James F. Brinkley, Peter Tarczy-Hornoch:
A Pilot Bridging Data Integration and Analytics: BioMediator and R? AMIA 2005 - [c17]Brenton Louie, Peter Mork, Ron Shaker, Natali Kolker, Eugene Kolker, Peter Tarczy-Hornoch:
Integration of Data for Gene Annotation Using the BioMediator System. AMIA 2005 - [c16]Kelan Wang, Peter Tarczy-Hornoch, Ron Shaker, Peter Mork, James F. Brinkley:
BioMediator Data Integration: Beyond Genomics to Neuroscience Data. AMIA 2005 - [c15]Peter Mork, Ron Shaker, Peter Tarczy-Hornoch:
The Multiple Roles of Ontologies in the BioMediator Data Integration System. DILS 2005: 96-104 - 2004
- [j3]Wanda Pratt, Madhu C. Reddy, David W. McDonald, Peter Tarczy-Hornoch, John H. Gennari:
Incorporating ideas from computer-supported cooperative work. J. Biomed. Informatics 37(2): 128-137 (2004) - [c14]Loren Donelson, Peter Tarczy-Hornoch, Peter Mork, Cindy Dolan, Joyce A. Mitchell, M. Barrier, Hao Mei:
The BioMediator System as a Data Integration Tool to Answer Diverse Biologic Queries. MedInfo 2004: 768-772 - 2003
- [c13]Hao Mei, Peter Tarczy-Hornoch, Peter Mork, Anthony J. Rossini, Ron Shaker, Loren Donelson:
Expression Array Annotation Using the BioMediator Biological Data Integration System and the BioConductor Analytic Platform. AMIA 2003 - 2002
- [j2]Aaron E. Carroll, Sunil Saluja, Peter Tarczy-Hornoch:
Consumer Health Information on the Internet. J. Am. Medical Informatics Assoc. 9(4): 402-403 (2002) - [c12]Aaron E. Carroll, Sunil Saluja, Peter Tarczy-Hornoch:
The implementation of a Personal Digital Assistant (PDA) based patient record and charting system: lessons learned. AMIA 2002 - [c11]Joseph Edwards, Peter Tarczy-Hornoch:
Implementation of a classification hierarchy for the GeneTests/GeneClinics genetic testing databases. AMIA 2002 - [c10]Peter Mork, Ron Shaker, Alon Y. Halevy, Peter Tarczy-Hornoch:
PQL: a declarative query language over dynamic biological schemata. AMIA 2002 - [c9]Ron Shaker, Peter Mork, Matt Barclay, Peter Tarczy-Hornoch:
A rule driven bi-directional translation system for remapping queries and result sets between a mediated schema and heterogeneous data sources. AMIA 2002 - 2001
- [c8]Aaron E. Carroll, Sunil Saluja, Peter Tarczy-Hornoch:
Development of a Personal Digital Assistant (PDA) based client/server NICU patient data and charting system. AMIA 2001 - [c7]Peter Mork, Alon Y. Levy, Peter Tarczy-Hornoch:
A model for data integration systems of biomedical data applied to online genetic databases. AMIA 2001 - 2000
- [j1]Peter Tarczy-Hornoch, Paul Shannon, Patty Baskin, Miriam Espeseth, Roberta A. Pagon:
Model Formulation: GeneClinics: A Hybrid Text/Data Electronic Publishing Model Using XML Applied to Clinical Genetic Testing. J. Am. Medical Informatics Assoc. 7(3): 267-276 (2000) - [c6]William B. Lober, Peter Tarczy-Hornoch:
Development of a Multi-axial Taxonomy for Clinical Documents. AMIA 2000 - [c5]Robin McEntire, Peter D. Karp, Neil F. Abernethy, David Benton, Gregg Helt, Matt DeJongh, Robert Kent, Anthony Kosky, Suzanna Lewis, Dan Hodnett, Eric P. Neumann, Frank Olken, Dhiraj K. Pathak, Peter Tarczy-Hornoch, Luca Toldo, Thodoros Topaloglou:
An Evaluation of Ontology Exchange Languages for Bioinformatics. ISMB 2000: 239-250
1990 – 1999
- 1998
- [c4]Peter J. Dunbar, Peter Tarczy-Hornoch, Sherrilynne S. Fuller, James LoGerfo, Kevin N. Ibrahim, Kari A. Stephens, Debra S. Ketchell, Harold I. Goldberg:
Planning and Building a Multi-Institutional Data Dictionary: The Problem List Solution. AMIA 1998 - [c3]Peter Tarczy-Hornoch, Maxine L. Covington, Joseph Edwards, Paul Shannon, Sherrilynne S. Fuller, Roberta A. Pagon:
Creation and maintenance of helix, a Web based database of medical genetics laboratories, to serve the needs of the genetics community. AMIA 1998 - 1997
- [c2]Kevin N. Ibrahim, Debra S. Ketchell, Peter Tarczy-Hornoch, Steve Rauch:
The Electronic Toolkit: Providing View-Based Reference Materials. AMIA 1997 - [c1]Peter Tarczy-Hornoch, T. S. Kwan-Gett, L. Fouche, James Hoath, Sherrilynne S. Fuller, Kevin N. Ibrahim, Debra S. Ketchell, James LoGerfo, Harold I. Goldberg:
Meeting clinician information needs by integrating access to the medical record and knowledge resources via the Web. AMIA 1997
Coauthor Index
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