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ORCIDDarren Treanor
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- affiliation: St James' University Hospital, Leeds, UK
- affiliation: University of Leeds, UK
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Journal Articles
- 2024
[j13]Lucy Godson
, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya, Derek R. Magee:
Immune subtyping of melanoma whole slide images using multiple instance learning. Medical Image Anal. 93: 103097 (2024)- 2023
- [j12]Henry King, Bethany Williams, Darren Treanor, Rebecca Randell:
How, for whom, and in what contexts will artificial intelligence be adopted in pathology? A realist interview study. J. Am. Medical Informatics Assoc. 30(3): 529-538 (2023) - 2021
- [j11]Caroline Bivik Stadler, Martin Lindvall, Claes Lundström, Anna Bodén, Karin Lindman, Jeronimo Rose, Darren Treanor, Johan Blomma, Karin Stacke, Nicolas Pinchaud, Martin Hedlund, Filip Landgren, Mischa Woisetschläger, Daniel Forsberg:
Proactive Construction of an Annotated Imaging Database for Artificial Intelligence Training. J. Digit. Imaging 34(1): 105-115 (2021) - [j10]Alexander I. Wright, Catriona M. Dunn, Michael Hale, Gordon G. A. Hutchins, Darren E. Treanor:
The Effect of Quality Control on Accuracy of Digital Pathology Image Analysis. IEEE J. Biomed. Health Informatics 25(2): 307-314 (2021) - 2019
- [j9]Martin Falk, Anders Ynnerman, Darren Treanor, Claes Lundström:
Interactive Visualization of 3D Histopathology in Native Resolution. IEEE Trans. Vis. Comput. Graph. 25(1): 1008-1017 (2019) - 2016
- [j8]Yanhui Liang, Fusheng Wang, Darren Treanor, Derek R. Magee, Nick Roberts, George Teodoro, Yangyang Zhu, Jun Kong:
A framework for 3D vessel analysis using whole slide images of liver tissue sections. Int. J. Comput. Biol. Drug Des. 9(1/2): 102-119 (2016) - [j7]Roy A. Ruddle, Rhys G. Thomas, Rebecca Randell, Philip Quirke, Darren Treanor:
The Design and Evaluation of Interfaces for Navigating Gigapixel Images in Digital Pathology. ACM Trans. Comput. Hum. Interact. 23(1): 5:1-5:29 (2016) - 2015
- [j6]Roy A. Ruddle, Rhys G. Thomas, Rebecca S. Randell, Phil Quirke, Darren Treanor:
Performance and interaction behaviour during visual search on large, high-resolution displays. Inf. Vis. 14(2): 137-147 (2015) - [j5]Aldo Badano, Craig Revie, Andrew Casertano, Wei-Chung Cheng, Phil J. Green, Tom Kimpe, Elizabeth A. Krupinski, Christye Sisson, Stein Olav Skrøvseth, Darren Treanor, Paul A. Boynton, David A. Clunie, Michael J. Flynn, Tatsuo Heki, Stephen M. Hewitt, Hiroyuki Homma, Andy Masia, Takashi Matsui, Balázs Nagy, Masahiro Nishibori, John Penczek, Thomas R. Schopf, Yukako Yagi, Hideto Yokoi:
Consistency and Standardization of Color in Medical Imaging: a Consensus Report. J. Digit. Imaging 28(1): 41-52 (2015) - [j4]Rebecca Randell, Thilina Ambepitiya, Claudia Mello-Thoms, Roy A. Ruddle, David S. Brettle, Rhys G. Thomas, Darren Treanor:
Effect of Display Resolution on Time to Diagnosis with Virtual Pathology Slides in a Systematic Search Task. J. Digit. Imaging 28(1): 68-76 (2015) - 2014
- [j3]Yi Song, Darren Treanor, Andrew J. Bulpitt, Nagitha Wijayathunga, Nick Roberts, Ruth Wilcox, Derek R. Magee:
Unsupervised Content Classification Based Nonrigid Registration of Differently Stained Histology Images. IEEE Trans. Biomed. Eng. 61(1): 96-108 (2014) - [j2]Adnan Mujahid Khan, Nasir M. Rajpoot, Darren Treanor, Derek R. Magee:
A Nonlinear Mapping Approach to Stain Normalization in Digital Histopathology Images Using Image-Specific Color Deconvolution. IEEE Trans. Biomed. Eng. 61(6): 1729-1738 (2014) - 2012
- [j1]Rebecca Randell, Roy A. Ruddle, Rhys Thomas, Darren Treanor:
Diagnosis at the microscope: a workplace study of histopathology. Cogn. Technol. Work. 14(4): 319-335 (2012)
Conference and Workshop Papers
- 2023
- [c17]Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Derek R. Magee:
Multi-level Graph Representations of Melanoma Whole Slide Images for Identifying Immune Subgroups. GRAIL/OCELOT@MICCAI 2023: 85-96 - 2022
- [c16]Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya:
Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups. MIDL 2022: 423-440 - 2017
- [c15]Martin Falk, Ingrid Hotz, Patric Ljung, Darren Treanor, Anders Ynnerman, Claes Lundström:
Transfer Function design toolbox for full-color volume datasets. PacificVis 2017: 171-179 - 2016
- [c14]Alexander I. Wright, Derek R. Magee, Philip Quirke, Darren Treanor:
Incorporating Local and Global Context for Better Automated Analysis of Colorectal Cancer on Digital Pathology Slides. MIUA 2016: 125-131 - [c13]Jesper Molin, Pawel W. Wozniak, Claes Lundström, Darren Treanor, Morten Fjeld:
Understanding Design for Automated Image Analysis in Digital Pathology. NordiCHI 2016: 58 - 2015
- [c12]Yanhui Liang, Fusheng Wang, Darren Treanor, Derek R. Magee, George Teodoro, Yangyang Zhu, Jun Kong:
Liver whole slide image analysis for 3D vessel reconstruction. ISBI 2015: 182-185 - [c11]Rebecca Randell, Roy A. Ruddle, Darren Treanor:
Barriers and facilitators to the introduction of digital pathology for diagnostic work. MedInfo 2015: 443-447 - [c10]Yanhui Liang, Fusheng Wang, Darren Treanor, Derek R. Magee, George Teodoro, Yangyang Zhu, Jun Kong:
A 3D Primary Vessel Reconstruction Framework with Serial Microscopy Images. MICCAI (3) 2015: 251-259 - [c9]Duane Carey, Nagitha Wijayathunga, Andrew J. Bulpitt, Darren Treanor:
A Novel Approach for the Colour Deconvolution of Multiple Histological Stains. MIUA 2015: 156-162 - 2014
- [c8]Stephen H. Gilbert, Olivier Bernus, Ed White, Nick Roberts, Darren Treanor, Derek R. Magee:
A framework for quantification of regional cardiac fibrosis from serial sections using 3D whole slide imaging. EMBC 2014: 6766-6769 - [c7]Alexander I. Wright, Derek R. Magee, Philip Quirke, Darren E. Treanor:
Towards automatic patient selection for chemotherapy in colorectal cancer trials. Medical Imaging: Digital Pathology 2014: 90410A - 2013
- [c6]Roy A. Ruddle, Waleed Fateen, Darren Treanor, Peter Sondergeld, Phil Quirke:
Leveraging wall-sized high-resolution displays for comparative genomics analyses of copy number variation. BioVis 2013: 89-96 - 2012
- [c5]Rebecca Randell, Gordon G. A. Hutchins, John Sandars, Thilina Ambepitiya, Darren Treanor, Rhys Thomas, Roy A. Ruddle:
Using a high-resolution wall-sized virtual microscope to teach undergraduate medical students. CHI Extended Abstracts 2012: 2435-2440 - [c4]A. Johannes Pretorius, Derek R. Magee, Darren Treanor, Roy A. Ruddle:
Visual Parameter Optimization for Biomedical Image Analysis: A Case Study. SIGRAD 2012: 67-75 - 2011
- [c3]Derek R. Magee, Darren Treanor, Phattthanaphong Chomphuwiset, Philip Quirke:
Context Aware Colour Classification in Digital Microscopy. MIUA 2011: 135-140 - [c2]Phattthanaphong Chomphuwiset, Derek R. Magee, Roger D. Boyle, Darren Treanor:
Context-Based Classification of Cell Nuclei and Tissue Regions in Liver Histopathology. MIUA 2011: 239-244 - [c1]Afzan Adam, Andrew J. Bulpitt, Darren Treanor:
Texture Analysis of Virtual Slides for Grading Dysplasia in Barretts Oesophagus. MIUA 2011: 269-274
Informal and Other Publications
- 2023
- [i5]Clare McGenity, Darren Treanor:
Navigating the reporting guideline environment for computational pathology: A review. CoRR abs/2301.09985 (2023) - [i4]Clare McGenity, Emily L. Clarke, Charlotte Jennings, Gillian Matthews, Caroline Cartlidge, Henschel Freduah-Agyemang, Deborah D. Stocken, Darren Treanor:
Artificial intelligence in digital pathology: a diagnostic test accuracy systematic review and meta-analysis. CoRR abs/2306.07999 (2023) - [i3]Charlotte Jennings, Darren Treanor, David S. Brettle:
Pathologists light level preferences using the microscope - a study to guide digital pathology display use. CoRR abs/2312.00475 (2023) - 2022
- [i2]Lucy Godson, Navid Alemi Koohbanani, Jeremie Nsengimana, Graham P. Cook, Emily L. Clarke, Darren Treanor, D. Timothy Bishop, Julia Newton-Bishop, Ali Gooya:
Weakly-supervised learning for image-based classification of primary melanomas into genomic immune subgroups. CoRR abs/2202.11524 (2022) - 2016
- [i1]Jesper Molin, Anna Bodén, Darren Treanor, Morten Fjeld, Claes Lundström:
Scale Stain: Multi-Resolution Feature Enhancement in Pathology Visualization. CoRR abs/1610.04141 (2016)
Coauthor Index
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