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Mohamed Ibrahim Abouelhoda
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2010 – 2019
- 2014
- [j7]Enno Ohlebusch, Timo Beller, Mohamed Ibrahim Abouelhoda:
Computing the Burrows-Wheeler transform of a string and its reverse in parallel. J. Discrete Algorithms 25: 21-33 (2014) - 2012
- [c11]Enno Ohlebusch, Timo Beller, Mohamed Ibrahim Abouelhoda:
Computing the Burrows-Wheeler Transform of a String and Its Reverse. CPM 2012: 243-256 - 2010
- [c10]Mohamed Ibrahim Abouelhoda, Hisham Mohamed:
Parallel Chaining Algorithms. EuroMPI 2010: 142-151
2000 – 2009
- 2009
- [j6]Mohamed Ibrahim Abouelhoda, Robert Giegerich, Behshad Behzadi, Jean-Marc Steyaert:
Alignment of Minisatellite Maps Based on Run-Length Encoding Scheme. J. Bioinform. Comput. Biol. 7(2): 287-308 (2009) - [c9]Hisham Mohamed, Mohamed Ibrahim Abouelhoda:
WinBioinfTools: Bioinformatics tools for Windows cluster. CLUSTER 2009: 1-4 - [i1]Mohamed Ibrahim Abouelhoda, Hisham Mohamed:
WinBioinfTools: Bioinformatics Tools for Windows High Performance Computing Server 2008. CoRR abs/0905.0586 (2009) - 2008
- [j5]Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch:
CoCoNUT: an efficient system for the comparison and analysis of genomes. BMC Bioinform. 9 (2008) - [j4]Martin Bader, Mohamed Ibrahim Abouelhoda, Enno Ohlebusch:
A fast algorithm for the multiple genome rearrangement problem with weighted reversals and transpositions. BMC Bioinform. 9 (2008) - [c8]Mohamed Ibrahim Abouelhoda, Robert Giegerich, Behshad Behzadi, Jean-Marc Steyaert:
Alignment of Minisatellite Maps: A Minimum Spanning Tree-based Approach. APBC 2008: 261-272 - 2007
- [j3]Enno Ohlebusch, Mohamed Ibrahim Abouelhoda, Kathrin Hockel:
A linear time algorithm for the inversion median problem in circular bacterial genomes. J. Discrete Algorithms 5(4): 637-646 (2007) - [c7]Mohamed Ibrahim Abouelhoda:
A Chaining Algorithm for Mapping cDNA Sequences to Multiple Genomic Sequences. SPIRE 2007: 1-13 - 2005
- [b1]Mohamed Ibrahim Abouelhoda:
Algorithms and a software system for comparative genome analysis. Universität Ulm, 2005, pp. I-IV, 1-191 - [j2]Mohamed Ibrahim Abouelhoda, Enno Ohlebusch:
Chaining algorithms for multiple genome comparison. J. Discrete Algorithms 3(2-4): 321-341 (2005) - [c6]Enno Ohlebusch, Mohamed Ibrahim Abouelhoda, Kathrin Hockel, Jan Stallkamp:
The Median Problem for the Reversal Distance in Circular Bacterial Genomes. CPM 2005: 116-127 - [c5]Christian Wawra, Mohamed Ibrahim Abouelhoda, Enno Ohlebusch:
Efficient mapping of large cDNA/EST databases to genomes: A comparison of two different strategies. German Conference on Bioinformatics 2005: 29-43 - [p1]Mohamed Ibrahim Abouelhoda:
Algorithmen und Softwarewerkzeuge für Vergleichende Genomanalyse. Ausgezeichnete Informatikdissertationen 2005: 9-18 - 2004
- [j1]Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch:
Replacing suffix trees with enhanced suffix arrays. J. Discrete Algorithms 2(1): 53-86 (2004) - 2003
- [c4]Mohamed Ibrahim Abouelhoda, Enno Ohlebusch:
Multiple Genome Alignment: Chaining Algorithms Revisited. CPM 2003: 1-16 - [c3]Mohamed Ibrahim Abouelhoda, Enno Ohlebusch:
A Local Chaining Algorithm and Its Applications in Comparative Genomics. WABI 2003: 1-16 - 2002
- [c2]Mohamed Ibrahim Abouelhoda, Enno Ohlebusch, Stefan Kurtz:
Optimal Exact Strring Matching Based on Suffix Arrays. SPIRE 2002: 31-43 - [c1]Mohamed Ibrahim Abouelhoda, Stefan Kurtz, Enno Ohlebusch:
The Enhanced Suffix Array and Its Applications to Genome Analysis. WABI 2002: 449-463
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