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2020 – today
- 2025
[c12]Khoa Tuan Nguyen, Homin Park, Gaeun Oh
, Joris Vankerschaver, Wesley De Neve:
Towards Improved Cervical Cancer Screening: Vision Transformer-Based Classification and Interpretability. ISBI 2025: 1-5- [c11]Khoa Tuan Nguyen, Francesca Tozzi, Wouter Willaert, Joris Vankerschaver, Niki Rashidian, Wesley De Neve:
Boosting 3D Liver Shape Datasets with Diffusion Models and Implicit Neural Representations. MICCAI (2) 2025: 67-77 - [c10]Solha Kang, Eugene Kim, Joris Vankerschaver, Utku Ozbulak:
Towards Affordable Tumor Segmentation and Visualization for 3D Breast MRI Using SAM2. Deep-Breath@MICCAI 2025: 81-90 - [c9]Utku Ozbulak, Seyed Amir Mousavi, Francesca Tozzi, Niki Rashidian, Wouter Willaert, Wesley De Neve, Joris Vankerschaver:
Revisiting the Evaluation Bias Introduced by Frame Sampling Strategies in Surgical Video Segmentation Using SAM2. FAIMI@MICCAI 2025: 198-207 - [c8]Jongbum Won, Wesley De Neve, Joris Vankerschaver, Utku Ozbulak:
SpurBreast: A Curated Dataset for Investigating Spurious Correlations in Real-World Breast MRI Classification. MICCAI (16) 2025: 555-564 - [i15]Utku Ozbulak, Esla Timothy Anzaku, Solha Kang, Wesley De Neve, Joris Vankerschaver:
Self-supervised Benchmark Lottery on ImageNet: Do Marginal Improvements Translate to Improvements on Similar Datasets? CoRR abs/2501.15431 (2025) - [i14]Solha Kang, Joris Vankerschaver, Utku Ozbulak:
Identifying Critical Tokens for Accurate Predictions in Transformer-based Medical Imaging Models. CoRR abs/2501.15452 (2025) - [i13]Utku Ozbulak, Seyed Amir Mousavi, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Wesley De Neve, Joris Vankerschaver:
Less is More? Revisiting the Importance of Frame Rate in Real-Time Zero-Shot Surgical Video Segmentation. CoRR abs/2502.20934 (2025) - [i12]Seyed Amir Mousavi, Utku Ozbulak, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve:
One Patient's Annotation is Another One's Initialization: Towards Zero-Shot Surgical Video Segmentation with Cross-Patient Initialization. CoRR abs/2503.02228 (2025) - [i11]Khoa Tuan Nguyen, Francesca Tozzi, Wouter Willaert, Joris Vankerschaver, Nikdokht Rashidian, Wesley De Neve:
Boosting 3D Liver Shape Datasets with Diffusion Models and Implicit Neural Representations. CoRR abs/2504.19402 (2025) - [i10]Khoa Tuan Nguyen, Ho-min Park, Gaeun Oh, Joris Vankerschaver, Wesley De Neve:
Towards Improved Cervical Cancer Screening: Vision Transformer-Based Classification and Interpretability. CoRR abs/2504.21340 (2025) - [i9]Solha Kang, Eugene Kim, Joris Vankerschaver, Utku Ozbulak:
Towards Affordable Tumor Segmentation and Visualization for 3D Breast MRI Using SAM2. CoRR abs/2507.23272 (2025) - [i8]Khoa Tuan Nguyen, Gaeun Oh, Ho-min Park, Francesca Tozzi, Wouter Willaert, Joris Vankerschaver, Niki Rashidian, Wesley De Neve:
Toward Using Machine Learning as a Shape Quality Metric for Liver Point Cloud Generation. CoRR abs/2508.02482 (2025) - [i7]Utku Ozbulak, Michaela Cohrs, Hristo L. Svilenov, Joris Vankerschaver, Wesley De Neve:
Improved Sub-Visible Particle Classification in Flow Imaging Microscopy via Generative AI-Based Image Synthesis. CoRR abs/2508.06021 (2025) - [i6]Solha Kang, Esla Timothy Anzaku, Wesley De Neve, Arnout Van Messem, Joris Vankerschaver, François Rameau, Utku Ozbulak:
Detecting Regional Spurious Correlations in Vision Transformers via Token Discarding. CoRR abs/2509.04009 (2025) - [i5]Jong Bum Won, Wesley De Neve, Joris Vankerschaver, Utku Ozbulak:
SpurBreast: A Curated Dataset for Investigating Spurious Correlations in Real-world Breast MRI Classification. CoRR abs/2510.02109 (2025) - 2024
- [j6]Hyun Jung Lee, Utku Ozbulak, Homin Park, Stephen Depuydt, Wesley De Neve, Joris Vankerschaver:
Assessing the reliability of point mutation as data augmentation for deep learning with genomic data. BMC Bioinform. 25(1): 170 (2024) - [c7]Negin Harandi, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver:
Grasshopper Optimization Algorithm (GOA): A Novel Algorithm or A Variant of PSO? ANTS 2024: 84-97 - [c6]Utku Ozbulak, Esla Timothy Anzaku, Solha Kang, Wesley De Neve, Joris Vankerschaver:
Self-supervised Benchmark Lottery on ImageNet: Do Marginal Improvements Translate to Improvements on Similar Datasets? IJCNN 2024: 1-8 - [c5]Solha Kang, Joris Vankerschaver, Utku Ozbulak:
Identifying Critical Tokens for Accurate Predictions in Transformer-Based Medical Imaging Models. MLMI@MICCAI (2) 2024: 169-179 - 2023
- [j5]Ho-min Park, Jongbum Won, Yunseol Park, Esla Timothy Anzaku, Joris Vankerschaver, Arnout Van Messem, Wesley De Neve, Hyunjin Shim:
CRISPR-Cas-Docker: web-based in silico docking and machine learning-based classification of crRNAs with Cas proteins. BMC Bioinform. 24(1): 167 (2023) - [j4]Utku Ozbulak, Hyun Jung Lee, Beril Boga, Esla Timothy Anzaku, Ho-min Park, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver:
Know Your Self-supervised Learning: A Survey on Image-based Generative and Discriminative Training. Trans. Mach. Learn. Res. 2023 (2023) - [c4]Khoa Tuan Nguyen, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve:
Towards Abdominal 3-D Scene Rendering from Laparoscopy Surgical Videos Using NeRFs. MLMI@MICCAI (1) 2023: 83-93 - [i4]Utku Ozbulak, Hyun Jung Lee, Beril Boga, Esla Timothy Anzaku, Ho-min Park, Arnout Van Messem, Wesley De Neve, Joris Vankerschaver:
Know Your Self-supervised Learning: A Survey on Image-based Generative and Discriminative Training. CoRR abs/2305.13689 (2023) - [i3]Woowon Jang, Shiwoo Koak, Jiwon Im, Utku Ozbulak, Joris Vankerschaver:
BRCA Gene Mutations in dbSNP: A Visual Exploration of Genetic Variants. CoRR abs/2309.00311 (2023) - [i2]Khoa Tuan Nguyen, Francesca Tozzi, Nikdokht Rashidian, Wouter Willaert, Joris Vankerschaver, Wesley De Neve:
Towards Abdominal 3-D Scene Rendering from Laparoscopy Surgical Videos using NeRFs. CoRR abs/2310.11645 (2023) - 2022
- [j3]Joris Vankerschaver, Steven J. Kern, Robert Kern:
VPsearch: fast exact sequence similarity search for genomic sequences. J. Open Source Softw. 7(78): 4236 (2022) - [j2]Dong Eui Chang, Matthew Perlmutter, Joris Vankerschaver:
Feedback Integrators for Mechanical Systems with Holonomic Constraints. Sensors 22(17): 6487 (2022) - [i1]Utku Ozbulak, Solha Kang, Jasper Zuallaert, Stephen Depuydt, Joris Vankerschaver:
Utilizing Mutations to Evaluate Interpretability of Neural Networks on Genomic Data. CoRR abs/2212.06151 (2022)
2010 – 2019
- 2014
- [j1]Joris Vankerschaver, Melvin Leok:
A Novel Formulation of Point Vortex Dynamics on the Sphere: Geometrical and Numerical Aspects. J. Nonlinear Sci. 24(1): 1-37 (2014) - 2012
- [c3]Scott David Kelly, Joris Vankerschaver:
Hamiltonian mechanics and nonlinear dynamics of a body subject to time-varying gyroscopic and potential forces. CDC 2012: 4436-4441 - 2010
- [c2]Joris Vankerschaver, Hiroaki Yoshimura, Melvin Leok, Jerrold E. Marsden:
Stokes-Dirac structures through reduction of infinite-dimensional Dirac structures. CDC 2010: 6265-6270
2000 – 2009
- 2009
- [c1]Yizhar Or, Joris Vankerschaver, Scott David Kelly, Richard M. Murray, Jerrold E. Marsden:
Geometric control of particle manipulation in a two-dimensional fluid. CDC 2009: 19-26
Coauthor Index
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