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Journal Articles
- 2024
[j4]Lorién López-Villellas
, Rubén Langarita-Benítez, Asaf Badouh, Víctor Soria Pardos, Quim Aguado-Puig, Guillem López-Paradís, Max Doblas, Javier Setoain, Chulho Kim, Makoto Ono, Adrià Armejach, Santiago Marco-Sola, Jesús Alastruey-Benedé, Pablo Ibáñez, Miquel Moretó:
GenArchBench: A genomics benchmark suite for arm HPC processors. Future Gener. Comput. Syst. 157: 313-329 (2024)- 2023
- [j3]Quim Aguado-Puig, Max Doblas, Christos Matzoros, Antonio Espinosa, Juan Carlos Moure, Santiago Marco-Sola, Miquel Moretó:
WFA-GPU: gap-affine pairwise read-alignment using GPUs. Bioinform. 39(12) (2023) - 2022
- [j2]David Castells-Rufas, Santiago Marco-Sola, Juan Carlos Moure, Quim Aguado-Puig, Antonio Espinosa:
FPGA Acceleration of Pre-Alignment Filters for Short Read Mapping With HLS. IEEE Access 10: 22079-22100 (2022) - [j1]Quim Aguado-Puig, Santiago Marco-Sola, Juan Carlos Moure, David Castells-Rufas, Lluc Alvarez, Antonio Espinosa, Miquel Moretó:
Accelerating Edit-Distance Sequence Alignment on GPU Using the Wavefront Algorithm. IEEE Access 10: 63782-63796 (2022)
Conference and Workshop Papers
- 2023
- [c2]Max Doblas, Oscar Lostes-Cazorla, Quim Aguado-Puig, Nick Cebry, Pau Fontova-Musté, Christopher Frances Batten, Santiago Marco-Sola, Miquel Moretó:
GMX: Instruction Set Extensions for Fast, Scalable, and Efficient Genome Sequence Alignment. MICRO 2023: 1466-1480 - 2021
- [c1]David Castells-Rufas, Santiago Marco-Sola, Quim Aguado-Puig, Antonio Espinosa-Morales, Juan Carlos Moure, Lluc Alvarez, Miquel Moretó:
OpenCL-based FPGA Accelerator for Semi-Global Approximate String Matching Using Diagonal Bit-Vectors. FPL 2021: 174-178
Coauthor Index
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