default search action
Google
Google Scholar
Semantic Scholar
Internet Archive Scholar
CiteSeerX
ORCIDFerhat Ay
Person information
Refine list
refinements active!
zoomed in on ?? of ?? records
view refined list in
export refined list as
2020 – today
- 2025
[j9]Pramod Shinde
, Lisa Willemsen, Michael Anderson, Minori Aoki, Saonli Basu, Julie G. Burel, Peng Cheng, Souradipto Ghosh Dastidar, Aidan Dunleavy, Tal Einav, Jamie Forschmiedt, Slim Fourati, Javier Garcia, William Gibson, Jason A. Greenbaum, Leying Guan, Weikang Guan, Jeremy P. Gygi, Brendan Ha, Joe Hou, Jason Hsiao, Yunda Huang, Rick Jansen, Bhargob Kakoty, Zhiyu Kang, James J. Kobie, Mari Kojima, Anna Konstorum, Jiyeun Lee, Sloan A. Lewis, Aixin Li, Eric F. Lock, Jarjapu Mahita, Marcus Mendes, Hailong Meng, Aidan Neher, Somayeh Nili, Lars Rønn Olsen, Shelby Orfield, James A. Overton, Nidhi Pai, Cokie Parker, Brian Qian, Mikkel Rasmussen, Joaquin Reyna, Eve Richardson, Sandra Safo, Josey Sorenson, Aparna Srinivasan, Nicola Thrupp, Rashmi Tippalagama, Raphael Trevizani, Steffen Ventz, Jiuzhou Wang, Cheng-Chang Wu, Ferhat Ay, Barry Grant, Steven H. Kleinstein, Bjoern Peters:
Putting computational models of immunity to the test - An invited challenge to predict B.pertussis vaccination responses. PLoS Comput. Biol. 21(3): 1012927 (2025)- 2023
- [j8]Ali Osman Berk Sapci, Shan Lu, Shuchen Yan, Ferhat Ay, Öznur Tastan, Sündüz Keles:
MuDCoD: multi-subject community detection in personalized dynamic gene networks from single-cell RNA sequencing. Bioinform. 39(10) (2023) - 2021
- [j7]Abhijit Chakraborty, Ferhat Ay, Ramana V. Davuluri:
ExTraMapper: exon- and transcript-level mappings for orthologous gene pairs. Bioinform. 37(20): 3412-3420 (2021)
2010 – 2019
- 2019
- [j6]Abbas Roayaei Ardakany, Ferhat Ay, Stefano Lonardi:
Selfish: discovery of differential chromatin interactions via a self-similarity measure. Bioinform. 35(14): i145-i153 (2019) - 2018
- [j5]Abhijit Chakraborty, Ferhat Ay:
Identification of copy number variations and translocations in cancer cells from Hi-C data. Bioinform. 34(2): 338-345 (2018) - 2014
- [j4]Nelle Varoquaux, Ferhat Ay, William Stafford Noble, Jean-Philippe Vert:
A statistical approach for inferring the 3D structure of the genome. Bioinform. 30(12): 26-33 (2014) - 2012
- [j3]Ferhat Ay, Michael Dang, Tamer Kahveci:
Metabolic network alignment in large scale by network compression. BMC Bioinform. 13(S-3): S2 (2012) - 2011
- [j2]Ferhat Ay, Manolis Kellis, Tamer Kahveci:
SubMAP: Aligning Metabolic Pathways with Subnetwork Mappings. J. Comput. Biol. 18(3): 219-235 (2011) - [c5]Michael Dang, Ferhat Ay, Tamer Kahveci:
A novel framework for large scale metabolic network alignments by compression. BCB 2011: 274-283 - 2010
- [c4]Ferhat Ay, Tamer Kahveci:
Functional similarities of reaction sets in metabolic pathways. BCB 2010: 102-111 - [c3]Ferhat Ay, Thang N. Dinh, My T. Thai, Tamer Kahveci:
Finding Dynamic Modules of Biological Regulatory Networks. BIBE 2010: 136-143 - [c2]Ferhat Ay, Günhan Gülsoy, Tamer Kahveci:
Finding steady states of large scale regulatory networks through partitioning. GENSiPS 2010: 1-4 - [c1]Ferhat Ay, Tamer Kahveci:
SubMAP: Aligning Metabolic Pathways with Subnetwork Mappings. RECOMB 2010: 15-30
2000 – 2009
- 2009
- [j1]Ferhat Ay, Tamer Kahveci, Valérie de Crécy-Lagard:
A Fast and Accurate Algorithm for Comparative Analysis of metabolic Pathways. J. Bioinform. Comput. Biol. 7(3): 389-428 (2009)
Coauthor Index
manage site settings
To protect your privacy, all features that rely on external API calls from your browser are turned off by default. You need to opt-in for them to become active. All settings here will be stored as cookies with your web browser. For more information see our F.A.Q.
Unpaywalled article links
Add open access links from 
to the list of external document links (if available).
Privacy notice: By enabling the option above, your browser will contact the API of unpaywall.org to load hyperlinks to open access articles. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Unpaywall privacy policy.
Archived links via Wayback Machine
For web page which are no longer available, try to retrieve content from the 
of the Internet Archive (if available).
Privacy notice: By enabling the option above, your browser will contact the API of archive.org to check for archived content of web pages that are no longer available. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Internet Archive privacy policy.
Reference lists
Add a list of references from 
, 
, and 
to record detail pages.
load references from crossref.org and opencitations.net
Privacy notice: By enabling the option above, your browser will contact the APIs of crossref.org, opencitations.net, and semanticscholar.org to load article reference information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the Crossref privacy policy and the OpenCitations privacy policy, as well as the AI2 Privacy Policy covering Semantic Scholar.
Citation data
Add a list of citing articles from and to record detail pages.
load citations from opencitations.net
Privacy notice: By enabling the option above, your browser will contact the API of opencitations.net and semanticscholar.org to load citation information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the OpenCitations privacy policy as well as the AI2 Privacy Policy covering Semantic Scholar.
OpenAlex data
Load additional information about publications from 
.
Privacy notice: By enabling the option above, your browser will contact the API of openalex.org to load additional information. Although we do not have any reason to believe that your call will be tracked, we do not have any control over how the remote server uses your data. So please proceed with care and consider checking the information given by OpenAlex.
last updated on 2025-05-12 22:44 CEST by the dblp team
all metadata released as open data under CC0 1.0 license
see also: Terms of Use | Privacy Policy | Imprint
dblp was originally created in 1993 at:
since 2018, dblp has been operated and maintained by:
the dblp computer science bibliography is funded and supported by:
