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Riu Yamashita
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2010 – 2019
- 2015
- [j12]Ayako Suzuki, Hiroyuki Wakaguri, Riu Yamashita, Shin Kawano
, Katsuya Tsuchihara, Sumio Sugano, Yutaka Suzuki, Kenta Nakai:
DBTSS as an integrative platform for transcriptome, epigenome and genome sequence variation data. Nucleic Acids Res. 43(Database-Issue): 87-91 (2015) - 2012
- [j11]Riu Yamashita, Sumio Sugano, Yutaka Suzuki, Kenta Nakai:
DBTSS: DataBase of Transcriptional Start Sites progress report in 2012. Nucleic Acids Res. 40(Database-Issue): 150-154 (2012) - 2011
- [j10]Toshiaki Katayama, Mark D. Wilkinson
, Rutger A. Vos
, Takeshi Kawashima, Shuichi Kawashima
, Mitsuteru Nakao, Yasunori Yamamoto, Hong-Woo Chun, Atsuko Yamaguchi
, Shin Kawano
, Jan Aerts
, Kiyoko F. Aoki-Kinoshita
, Kazuharu Arakawa
, Bruno Aranda, Raoul Jean Pierre Bonnal
, José María Fernández
, Takatomo Fujisawa, Paul M. K. Gordon, Naohisa Goto, Syed Haider, Todd W. Harris, Takashi Hatakeyama, Isaac Ho, Masumi Itoh, Arek Kasprzyk, Nobuhiro Kido, Young-Joo Kim, Akira R. Kinjo
, Fumikazu Konishi, Yulia Kovarskaya, Gregory Von Kuster, Alberto Labarga
, Vachiranee Limviphuvadh
, E. Luke McCarthy, Yasukazu Nakamura
, Yunsun Nam, Kozo Nishida
, Kunihiro Nishimura, Tatsuya Nishizawa, Soichi Ogishima, Tom Oinn, Shinobu Okamoto, Shujiro Okuda
, Keiichiro Ono, Kazuki Oshita, Keun-Joon Park, Nicholas H. Putnam
, Martin Senger, Jessica Severin, Yasumasa Shigemoto, Hideaki Sugawara, James Taylor, Oswaldo Trelles, Chisato Yamasaki, Riu Yamashita, Noriyuki Satoh, Toshihisa Takagi:
The 2nd DBCLS BioHackathon: interoperable bioinformatics Web services for integrated applications. J. Biomed. Semant. 2: 4 (2011) - 2010
- [j9]Riu Yamashita, Hiroyuki Wakaguri, Sumio Sugano, Yutaka Suzuki, Kenta Nakai:
DBTSS provides a tissue specific dynamic view of Transcription Start Sites. Nucleic Acids Res. 38(Database-Issue): 98-104 (2010)
2000 – 2009
- 2008
- [j8]Hiroyuki Wakaguri, Riu Yamashita, Yutaka Suzuki, Sumio Sugano, Kenta Nakai:
DBTSS: database of transcription start sites, progress report 2008. Nucleic Acids Res. 36(Database-Issue): 97-101 (2008) - 2007
- [j7]Toshiyuki Okumura, Hiroki Makiguchi, Yuko Makita
, Riu Yamashita, Kenta Nakai:
Melina II: a web tool for comparisons among several predictive algorithms to find potential motifs from promoter regions. Nucleic Acids Res. 35(Web-Server-Issue): 227-231 (2007) - 2006
- [j6]Riu Yamashita, Yutaka Suzuki, Hiroyuki Wakaguri, Katsuki Tsuritani, Kenta Nakai, Sumio Sugano:
DBTSS: DataBase of Human Transcription Start Sites, progress report 2006. Nucleic Acids Res. 34(Database-Issue): 86-89 (2006) - [j5]Nicolas Sierro, Takehiro Kusakabe, Keun-Joon Park, Riu Yamashita, Kengo Kinoshita, Kenta Nakai:
DBTGR: a database of tunicate promoters and their regulatory elements. Nucleic Acids Res. 34(Database-Issue): 552-555 (2006) - 2005
- [j4]Kikuya Kato, Riu Yamashita, Ryo Matoba, Morito Monden, Shinzaburo Noguchi, Toshihisa Takagi, Kenta Nakai:
Cancer gene expression database (CGED): a database for gene expression profiling with accompanying clinical information of human cancer tissues. Nucleic Acids Res. 33(Database-Issue): 533-536 (2005) - 2004
- [j3]Yutaka Suzuki, Riu Yamashita, Matsuyuki Shirota, Yuta Sakakibara, Joe Chiba, Junko Mizushima-Sugano, Alexander E. Kel, Takahiro Arakawa, Piero Carninci, Jun Kawai, Yoshihide Hayashizaki, Toshihisa Takagi, Kenta Nakai, Sumio Sugano:
Large-scale collection and characterization of promoters of human and mouse genes. Silico Biol. 4(4): 429-444 (2004) - [j2]Yutaka Suzuki, Riu Yamashita, Sumio Sugano, Kenta Nakai:
BTSS, DataBase of Transcriptional Start Sites: progress report 2004. Nucleic Acids Res. 32(Database-Issue): 78-81 (2004) - 2002
- [j1]Yutaka Suzuki, Riu Yamashita, Kenta Nakai, Sumio Sugano:
DBTSS: DataBase of human Transcriptional Start Sites and full-length cDNAs. Nucleic Acids Res. 30(1): 328-331 (2002)
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