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ORCIDNorio Kobayashi
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2020 – today
- 2024
[i3]Julio Cesar Rangel Reyes, Tarcisio Mendes de Farias, Ana Claudia Sima, Norio Kobayashi:
SPARQL Generation: an analysis on fine-tuning OpenLLaMA for Question Answering over a Life Science Knowledge Graph. CoRR abs/2402.04627 (2024)- 2023
- [c30]Julio Cesar Rangel Reyes, Norio Kobayashi:
Developing a semantic event search engine for biomedical events. SWAT4HCLS 2023: 128-129 - 2021
- [j11]Imad Abugessaisa
, Jordan A. Ramilowski, Marina Lizio, Jesicca Severin, Akira Hasegawa, Jayson Harshbarger, Atsushi Kondo, Shuhei Noguchi, Chi Wai Yip, Jasmine Li Ching Ooi, Michihira Tagami, Fumi Hori, Saumya Agrawal, Chung-Chau Hon, Mélissa Cardon, Shuya Ikeda, Hiromasa Ono, Hidemasa Bono, Masaki Kato, Kosuke Hashimoto, Alessandro Bonetti, Norio Kobayashi, Jay W. Shin, Michiel J. L. de Hoon, Yoshihide Hayashizaki, Piero Carninci, Hideya Kawaji, Takeya Kasukawa:
FANTOM enters 20th year: expansion of transcriptomic atlases and functional annotation of non-coding RNAs. Nucleic Acids Res. 49(Database-Issue): D892-D898 (2021) - [i2]Satoshi Kume, Hiroshi Masuya, Yosky Kataoka, Norio Kobayashi:
Development of an Ontology for an Integrated Image Analysis Platform to enable Global Sharing of Microscopy Imaging Data. CoRR abs/2110.10407 (2021) - [i1]Satoshi Kume, Hiroshi Masuya, Mitsuyo Maeda, Mitsuo Suga, Yosky Kataoka, Norio Kobayashi:
Development of Semantic Web-based Imaging Database for Biological Morphome. CoRR abs/2110.12058 (2021)
2010 – 2019
- 2019
- [j10]Masahiko Morita, Kazuro Shimokawa, Masaomi Nishimura, Sakiko Nakamura, Yuki Tsujimura, Satoko Takemoto, Takehiro Tawara, Hideo Yokota, Shuhei Wemler, Daisuke Miyamoto, Hidetoshi Ikeno, Akira Sato, Teiichi Furuichi, Norio Kobayashi, Yoshihiro Okumura, Yoko Shiraishi-Yamaguchi, Yuko Okamura-Oho:
ViBrism DB: an interactive search and viewer platform for 2D/3D anatomical images of gene expression and co-expression networks. Nucleic Acids Res. 47(Database-Issue): D859-D866 (2019) - [c29]Josh Moore, Norio Kobayashi, Susanne Kunis, Shuichi Onami, Jason R. Swedlow:
On Bringing Bioimaging Data into the Open (World). SWAT4HCLS 2019: 44-53 - [c28]Norio Kobayashi, Josh Moore, Shuichi Onami, Jason R. Swedlow:
OME Core Ontology: An OWL-based Life Science Imaging Data Model. SWAT4HCLS 2019: 149-150 - [c27]Norio Kobayashi, Yasunori Yamamoto, Atsuko Yamaguchi:
UmakaData Extension: Toward Realization of a Practical SPARQL Endpoint Discovery Service for Life Sciences. SWAT4HCLS 2019: 151-152 - 2018
- [j9]Norio Kobayashi, Satoshi Kume, Kai Lenz, Hiroshi Masuya:
RIKEN MetaDatabase: A Database Platform for Health Care and Life Sciences as a Microcosm of Linked Open Data Cloud. Int. J. Semantic Web Inf. Syst. 14(1): 140-164 (2018) - 2017
- [c26]Atsuko Yamaguchi, Kouji Kozaki, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi:
Semantic Graph Analysis for Federated LOD Surfing in Life Sciences. JIST 2017: 268-276 - [c25]Satoshi Kume, Hiroshi Masuya, Mitsuyo Maeda, Mitsuo Suga, Yosky Kataoka, Norio Kobayashi:
Development of Semantic Web-Based Imaging Database for Biological Morphome. JIST 2017: 277-285 - [c24]Norio Kobayashi, Satoshi Kume, Hiroshi Masuya:
Metadata-driven Interdisciplinary Research Projects Using RIKEN MetaDatabase. SWAT4LS 2017 - [c23]Atsuko Yamaguchi, Kouji Kozaki, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi:
LOD Surfer API: Web API for LOD Surfing Using Class-Class Relationships in Life Sciences. SWAT4LS 2017 - 2016
- [c22]Norio Kobayashi, Kai Lenz, Hiroshi Masuya:
RIKEN MetaDatabase: A Database Platform as a Microcosm of Linked Open Data Cloud in the Life Sciences. JIST (Workshops & Posters) 2016: 46-49 - [c21]Atsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi:
SPARQL Builder: Constructing SPARQL Query by Traversing Class-Class Relationships for Life Science Databases. JIST (Workshops & Posters) 2016: 58-61 - [c20]Norio Kobayashi, Kai Lenz, Hiroshi Masuya:
RIKEN MetaDatabase: A Database Platform as a Microcosm of Linked Open Data Cloud in the Life Sciences. JIST 2016: 99-115 - [c19]Atsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi:
Semantic Data Acquisition by Traversing Class-Class Relationships Over Linked Open Data. JIST 2016: 136-151 - [c18]Satoshi Kume, Hiroshi Masuya, Yosky Kataoka, Norio Kobayashi:
Development of an Ontology for an Integrated Image Analysis Platform to enable Global Sharing of Microscopy Imaging Data. ISWC (Posters & Demos) 2016 - [c17]Kai Lenz, Hiroshi Masuya, Norio Kobayashi:
RIKEN MetaDatabase: a Database Publication Platform for RIKENs Life-science Researchers that Promotes Research Collaborations over Different Research Area. ISWC (Posters & Demos) 2016 - [c16]Terue Takatsuki, Mikako Saito, Sadahiro Kumagai, Eiki Takayama, Kazuya Ohshima, Nozomu Ohshiro, Kai Lenz, Nobuhiko Tanaka, Norio Kobayashi, Hiroshi Masuya:
A RDF based Portal of Biological Phenotype Data produced in Japan. ISWC (Posters & Demos) 2016 - [c15]Atsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Yasunori Yamamoto, Hiroshi Masuya, Norio Kobayashi:
Data Acquisition by Traversing Class-Class Relationships over the Linked Open Data. ISWC (Posters & Demos) 2016 - [c14]Atsuko Yamaguchi, Yasunori Yamamoto, Kouji Kozaki, Kai Lenz, Hiroshi Masuya, Norio Kobayashi:
SPARQL Query Construction with Monitoring Service for Endpoints. SWAT4LS 2016 - 2015
- [c13]Atsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Hongyan Wu, Yasunori Yamamoto, Norio Kobayashi:
Efficiently Finding Paths Between Classes to Build a SPARQL Query for Life-Science Databases. JIST 2015: 321-330 - [c12]Atsuko Yamaguchi, Katsuhiko Okubo, Norio Kobayashi, Kouji Kozaki, Sadahiro Kumagai, Kai Lenz, Tomoe Nobusada, Hongyan Wu, Yasunori Yamamoto, Hideki Hatanaka:
RDF-Based Integration with SPARQL Building System for Life Science Database Archive. SWAT4LS 2015: 195-196 - [c11]Hiroshi Masuya, Terue Takatsuki, Mikako Saito, Eiki Takayama, Kazuya Ohshima, Nozomu Ohshiro, Kai Lenz, Nobuhiko Tanaka, Hiroshi Mori, Shuichi Kawashima, Norio Kobayashi:
RDF-based Data Sharing of Bio-resource Related Information. SWAT4LS 2015: 210-211 - [c10]Norio Kobayashi, Kai Lenz, Hiroshi Masuya:
RIKEN Meta Database: A Life-science Metadata Database Based on the Semantic Web. SWAT4LS 2015: 222-223 - 2014
- [c9]Atsuko Yamaguchi, Kouji Kozaki, Kai Lenz, Hongyan Wu, Norio Kobayashi:
An Intelligent SPARQL Query Builder for Exploration of Various Life-science Databases. IESD@ISWC 2014 - [c8]Norio Kobayashi, Kai Lenz, Hongyan Wu, Kouji Kozaki, Atsuko Yamaguchi:
Prototype Implementation of SPARQL Builder for Life-science Databases by Intelligent Schema Analysis on RDF datasets. SWAT4LS 2014 - 2013
- [j8]Yuko Makita, Norio Kobayashi, Yuko Yoshida, Koji Doi, Yoshiki Mochizuki, Koro Nishikata, Akihiro Matsushima, Satoshi Takahashi, Manabu Ishii, Terue Takatsuki, Rinki Bhatia, Zolzaya Khadbaatar, Hajime Watabe, Hiroshi Masuya, Tetsuro Toyoda:
PosMed: ranking genes and bioresources based on Semantic Web Association Study. Nucleic Acids Res. 41(Webserver-Issue): 109-114 (2013) - [c7]Norio Kobayashi, Yuko Makita, Manabu Ishii, Akihiro Matsushima, Yoshiki Mochizuki, Koji Doi, Koro Nishikata, David Gifford, Terue Takatsuki, Hiroshi Masuya, Tetsuro Toyoda:
PosMed: A Biomedical Entity Prioritisation Tool Based on Statistical Inference over Literature and the Semantic Web. SWAT4LS 2013 - 2012
- [c6]Hiroshi Masuya, Terue Takatsuki, Yuko Makita, Yuko Yoshida, Yoshiki Mochizuki, Norio Kobayashi, Atsushi Yoshiki, Yukio Nakamura, Tetsuro Toyoda, Yuichi Obata:
Development of Linked Open Data for Bioresources. JIST 2012: 350-355 - 2011
- [j7]Hiroshi Masuya, Yuko Makita, Norio Kobayashi, Koro Nishikata, Yuko Yoshida, Yoshiki Mochizuki, Koji Doi, Terue Takatsuki, Kazunori Waki, Nobuhiko Tanaka, Manabu Ishii, Akihiro Matsushima, Satoshi Takahashi, Atsushi Hijikata, Kouji Kozaki, Teiichi Furuichi, Hideya Kawaji, Shigeharu Wakana, Yukio Nakamura, Atsushi Yoshiki, Takehide Murata, Kaoru Fukami-Kobayashi, S. Sujatha Mohan, Osamu Ohara, Yoshihide Hayashizaki, Riichiro Mizoguchi, Yuichi Obata, Tetsuro Toyoda:
The RIKEN integrated database of mammals. Nucleic Acids Res. 39(Database-Issue): 861-870 (2011) - [j6]Norio Kobayashi, Manabu Ishii, Satoshi Takahashi, Yoshiki Mochizuki, Akihiro Matsushima, Tetsuro Toyoda:
Semantic-JSON: a lightweight web service interface for Semantic Web contents integrating multiple life science databases. Nucleic Acids Res. 39(Web-Server-Issue): 533-540 (2011) - [c5]Hiroshi Masuya, Georgios V. Gkoutos, Nobuhiko Tanaka, Kazunori Waki, Yoshihiro Okuda, Tatsuya Kushida, Norio Kobayashi, Koji Doi, Kouji Kozaki, Robert Hoehndorf, Shigeharu Wakana, Tetsuro Toyoda, Riichiro Mizoguchi:
An Advanced Strategy for Integration of Biological Measurement Data. ICBO 2011 - [c4]Norio Kobayashi, Tetsuro Toyoda:
BioSPARQL: ontology-based smart building of SPARQL queries for biological linked open data. SWAT4LS 2011: 47-49
2000 – 2009
- 2009
- [j5]Akihiro Matsushima, Norio Kobayashi, Yoshiki Mochizuki, Manabu Ishii, Shuji Kawaguchi, Takaho A. Endo, Ryo Umetsu, Yuko Makita, Tetsuro Toyoda:
OmicBrowse: a Flash-based high-performance graphics interface for genomic resources. Nucleic Acids Res. 37(Web-Server-Issue): 57-62 (2009) - [j4]Yuko Yoshida, Yuko Makita, Naohiko Heida, Satomi Asano, Akihiro Matsushima, Manabu Ishii, Yoshiki Mochizuki, Hiroshi Masuya, Shigeharu Wakana, Norio Kobayashi, Tetsuro Toyoda:
PosMed (Positional Medline): prioritizing genes with an artificial neural network comprising medical documents to accelerate positional cloning. Nucleic Acids Res. 37(Web-Server-Issue): 147-152 (2009) - 2008
- [j3]Norio Kobayashi, Tetsuro Toyoda:
Statistical search on the Semantic Web. Bioinform. 24(7): 1002-1010 (2008) - [c3]Norio Kobayashi, Yuko Makita, Eli Kaminuma, Shuji Kawaguchi, Yuko Yoshida, Yoshiki Mochizuki, Akihiro Matsushima, Manabu Ishii, Ryo Umetsu, Satomi Asano, Naohiko Heida, Tetsuya Sakurai, Takashi Kuromori, Kazuo Shinozaki, Tetsuro Toyoda:
A Secure Data Repository Integrating Huge Volumes of Digital Contents as a Semantic Web. SWAT4LS 2008 - [c2]Norio Kobayashi, Tetsuro Toyoda:
Penta and Hexa Statements are Suitable for Representing Omics Knowledge on the Semantic Web. SWAT4LS 2008 - 2007
- [j2]Tetsuro Toyoda, Yoshiki Mochizuki, Keith Player, Naohiko Heida, Norio Kobayashi, Yoshiyuki Sakaki:
OmicBrowse: a browser of multidimensional omics annotations. Bioinform. 23(4): 524-526 (2007) - 2006
- [j1]Norio Kobayashi, Mircea Marin, Yoshimasa Tanaka, Hideko Urushihara:
On the Development of an Analysis System for Upstream Sequences in Dictyostelium discoideum Genome. Inf. Media Technol. 1(2): 742-747 (2006) - 2001
- [c1]Norio Kobayashi, Mircea Marin, Tetsuo Ida:
Collaborative Constraint Functional Logic Programming in an Open Environment. APLAS 2001: 49-59
Coauthor Index
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last updated on 2024-10-07 22:15 CEST by the dblp team
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