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Milot Mirdita
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2020 – today
- 2023
- [j8]Hyunbin Kim
, Milot Mirdita
, Martin Steinegger
:
Foldcomp: a library and format for compressing and indexing large protein structure sets. Bioinform. 39(4) (2023) - 2021
- [j7]Milot Mirdita
, Martin Steinegger
, Florian P. Breitwieser
, Johannes Söding
, Eli Levy Karin
:
Fast and sensitive taxonomic assignment to metagenomic contigs. Bioinform. 37(18): 3029-3031 (2021) - [j6]Ruoshi Zhang
, Milot Mirdita
, Eli Levy Karin
, Clovis Norroy, Clovis Galiez
, Johannes Söding
:
SpacePHARER: sensitive identification of phages from CRISPR spacers in prokaryotic hosts. Bioinform. 37(19): 3364-3366 (2021) - [j5]Bi Zhao, Akila Katuwawala, Christopher J. Oldfield, A. Keith Dunker, Eshel Faraggi, Jörg Gsponer, Andrzej Kloczkowski, Nawar Malhis, Milot Mirdita
, Zoran Obradovic, Johannes Söding
, Martin Steinegger
, Yaoqi Zhou
, Lukasz A. Kurgan
:
DescribePROT: database of amino acid-level protein structure and function predictions. Nucleic Acids Res. 49(Database-Issue): D298-D308 (2021) - [j4]Michael Bernhofer
, Christian Dallago
, Timothy Karl, Venkata P. Satagopam
, Michael Heinzinger, Maria Littmann, Tobias Olenyi
, Jiajun Qiu
, Konstantin Schütze, Guy Yachdav, Haim Ashkenazy
, Nir Ben-Tal
, Yana Bromberg
, Tatyana Goldberg, László Kaján, Seán I. O'Donoghue, Chris Sander, Andrea Schafferhans, Avner Schlessinger, Gerrit Vriend, Milot Mirdita
, Piotr Gawron, Wei Gu
, Yohan Jarosz, Christophe Trefois
, Martin Steinegger
, Reinhard Schneider
, Burkhard Rost
:
PredictProtein - Predicting Protein Structure and Function for 29 Years. Nucleic Acids Res. 49(Webserver-Issue): 535-540 (2021)
2010 – 2019
- 2019
- [j3]Milot Mirdita
, Martin Steinegger
, Johannes Söding:
MMseqs2 desktop and local web server app for fast, interactive sequence searches. Bioinform. 35(16): 2856-2858 (2019) - [j2]Martin Steinegger
, Markus Meier, Milot Mirdita
, Harald Vöhringer
, Stephan J. Haunsberger, Johannes Söding
:
HH-suite3 for fast remote homology detection and deep protein annotation. BMC Bioinform. 20(1): 473:1-473:15 (2019) - 2017
- [j1]Milot Mirdita
, Lars von den Driesch, Clovis Galiez, Maria Jesus Martin, Johannes Söding, Martin Steinegger
:
Uniclust databases of clustered and deeply annotated protein sequences and alignments. Nucleic Acids Res. 45(Database-Issue): D170-D176 (2017)
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