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Susumu Okazaki
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Journal Articles
- 2022
- [j12]Hiromi Baba
, Ryo Urano, Tetsuro Nagai, Susumu Okazaki:
Prediction of self-diffusion coefficients of chemically diverse pure liquids by all-atom molecular dynamics simulations. J. Comput. Chem. 43(28): 1892-1900 (2022) - [j11]Hiromi Baba
, Ryo Urano, Tetsuro Nagai, Susumu Okazaki:
Cover Image. J. Comput. Chem. 43(28): i (2022) - 2021
- [j10]Yoshimichi Andoh
, Shin'ichi Ichikawa, Tatsuya Sakashita
, Noriyuki Yoshii
, Susumu Okazaki:
Algorithm to minimize MPI communications in the parallelized fast multipole method combined with molecular dynamics calculations. J. Comput. Chem. 42(15): 1073-1087 (2021) - 2020
- [j9]Noriyuki Yoshii
, Yoshimichi Andoh
, Susumu Okazaki:
Fast multipole method for three-dimensional systems with periodic boundary condition in two directions. J. Comput. Chem. 41(9): 940-948 (2020) - [j8]Yoshimichi Andoh
, Noriyuki Yoshii
, Susumu Okazaki:
Extension of the fast multipole method for the rectangular cells with an anisotropic partition tree structure. J. Comput. Chem. 41(14): 1353-1367 (2020) - 2019
- [j7]Kazushi Fujimoto, Rajadeep Singh Payal, Tomonori Hattori, Wataru Shinoda, Masayuki Nakagaki, Shigeyoshi Sakaki, Susumu Okazaki:
Development of dissociative force field for all-atomistic molecular dynamics calculation of fracture of polymers. J. Comput. Chem. 40(29): 2571-2576 (2019) - [j6]Kosuke Takeda
, Kazushi Fujimoto
, Noriyuki Yoshii
, Susumu Okazaki:
Molecular dynamics study of solubilization of cyclohexane, benzene, and phenol into mixed micelles composed of sodium dodecyl sulfate and octaethylene glycol monododecyl ether. J. Comput. Chem. 40(31): 2722-2729 (2019) - [j5]Huihui Liu
, Susumu Okazaki, Wataru Shinoda
:
Heteroaryldihydropyrimidines Alter Capsid Assembly By Adjusting the Binding Affinity and Pattern of the Hepatitis B Virus Core Protein. J. Chem. Inf. Model. 59(12): 5104-5110 (2019) - 2018
- [j4]Noriyuki Yoshii
, Yoshimichi Andoh
, Susumu Okazaki:
Pressure tensor for electrostatic interaction calculated by fast multipole method with periodic boundary condition. J. Comput. Chem. 39(19): 1192-1199 (2018) - [j3]Soumya Lipsa Rath
, Huihui Liu
, Susumu Okazaki, Wataru Shinoda
:
Identification of Factors Promoting HBV Capsid Self-Assembly by Assembly-Promoting Antivirals. J. Chem. Inf. Model. 58(2): 328-337 (2018) - [j2]Yoshimichi Andoh
, Soichiro Suzuki, Satoshi Ohshima, Tatsuya Sakashita
, Masao Ogino, Takahiro Katagiri, Noriyuki Yoshii, Susumu Okazaki:
A thread-level parallelization of pairwise additive potential and force calculations suitable for current many-core architectures. J. Supercomput. 74(6): 2449-2469 (2018) - 2017
- [j1]Yoshimichi Andoh
, Noriyuki Yoshii, Atsushi Yamada
, Susumu Okazaki:
Evaluation of atomic pressure in the multiple time-step integration algorithm. J. Comput. Chem. 38(10): 704-713 (2017)
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