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Thomas Fober
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2010 – 2019
- 2019
- [j13]Christian Beilschmidt, Michael Mattig, Thomas Fober, Bernhard Seeger:
An efficient aggregation and overlap removal algorithm for circle maps. GeoInformatica 23(3): 473-498 (2019) - [c15]Christian Beilschmidt, Michael Mattig, Thomas Fober, Bernhard Seeger:
An Efficient Method for Exploratory Data Visualization of Big Spatial Data on Commodity Hardware. GI-Jahrestagung 2019: 261-262 - 2018
- [j12]Matthias Leinweber, Thomas Fober, Bernd Freisleben:
GPU-Based Point Cloud Superpositioning for Structural Comparisons of Protein Binding Sites. IEEE ACM Trans. Comput. Biol. Bioinform. 15(3): 740-752 (2018) - [c14]Michael Mattig, Thomas Fober, Christian Beilschmidt, Bernhard Seeger:
Kernel-Based Cardinality Estimation on Metric Data. EDBT 2018: 349-360 - 2017
- [c13]Christian Beilschmidt, Thomas Fober, Michael Mattig, Bernhard Seeger:
A Linear-Time Algorithm for the Aggregation and Visualization of Big Spatial Point Data. SIGSPATIAL/GIS 2017: 73:1-73:4 - [c12]Christian Beilschmidt, Thomas Fober, Michael Mattig, Bernhard Seeger:
Quality Measures for Visual Point Clustering in Geospatial Mapping. W2GIS 2017: 153-168 - 2016
- [j11]Matthias Leinweber, Thomas Fober, Marc Strickert, Lars Baumgärtner, Gerhard Klebe, Bernd Freisleben, Eyke Hüllermeier:
CavSimBase: A Database for Large Scale Comparison of Protein Binding Sites. IEEE Trans. Knowl. Data Eng. 28(6): 1423-1434 (2016) - 2014
- [j10]Timo Krotzky, Thomas Rickmeyer, Thomas Fober, Gerhard Klebe:
Extraction of Protein Binding Pockets in Close Neighborhood of Bound Ligands Makes Comparisons Simple Due to Inherent Shape Similarity. J. Chem. Inf. Model. 54(11): 3229-3237 (2014) - [j9]Timo Krotzky, Thomas Fober, Eyke Hüllermeier, Gerhard Klebe:
Extended Graph-Based Models for Enhanced Similarity Search in Cavbase. IEEE ACM Trans. Comput. Biol. Bioinform. 11(5): 878-890 (2014) - [j8]Michiel Stock, Thomas Fober, Eyke Hüllermeier, Serghei Glinca, Gerhard Klebe, Tapio Pahikkala, Antti Airola, Bernard De Baets, Willem Waegeman:
Identification of Functionally Related Enzymes by Learning-to-Rank Methods. IEEE ACM Trans. Comput. Biol. Bioinform. 11(6): 1157-1169 (2014) - [i1]Michiel Stock, Thomas Fober, Eyke Hüllermeier, Serghei Glinca, Gerhard Klebe, Tapio Pahikkala, Antti Airola, Bernard De Baets, Willem Waegeman:
Identification of functionally related enzymes by learning-to-rank methods. CoRR abs/1405.4394 (2014) - 2013
- [b1]Thomas Fober:
Geometric, Feature-based and Graph-based Approaches for the Structural Analysis of Protein Binding Sites : Novel Methods and Computational Analysis. University of Marburg, 2013 - [j7]Timo Krotzky, Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier:
Extended graph-based models for enhanced similarity retrieval in Cavbase. J. Cheminformatics 5(S-1): 29 (2013) - [j6]Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier:
Graph-based methods for protein structure comparison. WIREs Data Mining Knowl. Discov. 3(5): 307-320 (2013) - [c11]Maryam Nasiri, Thomas Fober, Robin Senge, Eyke Hüllermeier:
Fuzzy pattern trees as an alternative to rule-based fuzzy systems: Knowledge-driven, data-driven and hybrid modeling of color yield in polyester dyeing. IFSA/NAFIPS 2013: 715-721 - [p1]Thomas Fober, Gerhard Klebe, Eyke Hüllermeier:
Local Clique Merging: An Extension of the Maximum Common Subgraph Measure with Applications in Structural Bioinformatics. Algorithms from and for Nature and Life 2013: 279-286 - 2012
- [j5]Robin Senge, Thomas Fober, Maryam Nasiri, Eyke Hüllermeier:
Fuzzy Pattern Trees: Ein alternativer Ansatz zur Fuzzy-Modellierung. Autom. 60(10): 622-629 (2012) - [c10]Matthias Leinweber, Lars Baumgärtner, Marco Mernberger, Thomas Fober, Eyke Hüllermeier, Gerhard Klebe, Bernd Freisleben:
GPU-based Cloud computing for comparing the structure of protein binding sites. DEST 2012: 1-6 - [e1]Eyke Hüllermeier, Sebastian Link, Thomas Fober, Bernhard Seeger:
Scalable Uncertainty Management - 6th International Conference, SUM 2012, Marburg, Germany, September 17-19, 2012. Proceedings. Lecture Notes in Computer Science 7520, Springer 2012, ISBN 978-3-642-33361-3 [contents] - 2011
- [j4]Thomas Fober, Serghei Glinca, Gerhard Klebe, Eyke Hüllermeier:
Superposition and Alignment of Labeled Point Clouds. IEEE ACM Trans. Comput. Biol. Bioinform. 8(6): 1653-1666 (2011) - 2010
- [j3]Patrick Pfeffer, Thomas Fober, Eyke Hüllermeier, Gerhard Klebe:
GARLig: A Fully Automated Tool for Subset Selection of Large Fragment Spaces via a Self-Adaptive Genetic Algorithm. J. Chem. Inf. Model. 50(9): 1644-1659 (2010) - [c9]Thomas Fober, Eyke Hüllermeier:
Similarity measures for protein structures based on fuzzy histogram comparison. FUZZ-IEEE 2010: 1-7 - [c8]Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier:
Efficient Similarity Retrieval of Protein Binding Sites based on Histogram Comparison. GCB 2010: 51-59
2000 – 2009
- 2009
- [j2]Thomas Fober, Marco Mernberger, Gerhard Klebe, Eyke Hüllermeier:
Evolutionary construction of multiple graph alignments for the structural analysis of biomolecules. Bioinform. 25(16): 2110-2117 (2009) - [j1]Yu Yi, Thomas Fober, Eyke Hüllermeier:
Fuzzy Operator Trees for Modeling Rating Functions. Int. J. Comput. Intell. Appl. 8(4): 413-428 (2009) - [c7]Thomas Fober, Eyke Hüllermeier:
Fuzzy Modeling of Labeled Point Cloud Superposition for the Comparison of Protein Binding Sites. IFSA/EUSFLAT Conf. 2009: 1299-1304 - [c6]Thomas Fober, Marco Mernberger, Ralph Moritz, Eyke Hüllermeier:
Graph-Kernels for the Comparative Analysis of Protein Active Sites. GCB 2009: 21-31 - [c5]Imen Boukhris, Zied Elouedi, Thomas Fober, Marco Mernberger, Eyke Hüllermeier:
Similarity Analysis of Protein Binding Sites: A Generalization of the Maximum Common Subgraph Measure Based on Quasi-Clique Detection. ISDA 2009: 1245-1250 - [c4]Thomas Fober, Gerhard Klebe, Eyke Hüllermeier:
Efficient Construction of Multiple Geometrical Alignments for the Comparison of Protein Binding Sites. ISDA 2009: 1251-1256 - [c3]Thomas Fober, Marco Mernberger, Vitalik Melnikov, Ralph Moritz, Eyke Hüllermeier:
Extension and Empirical Comparison of Graph-Kernels for the Analysis of Protein Active Sites. LWA 2009: KDML:30-36 - 2008
- [c2]Thomas Fober, Eyke Hüllermeier, Marco Mernberger:
Evolutionary Construction of Multiple Graph Alignments for the Structural Analysis of Biomolecules. German Conference on Bioinformatics 2008: 44-53 - [c1]Thomas Fober, Eyke Hüllermeier, Marco Mernberger:
Evolutionary Construction of Multiple Graph Alignments for Mining Structured Biomolecular Data. LWA 2008: 27-33
Coauthor Index
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