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ORCIDStephanus Daniel Handoko
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Books and Theses
- 2013
[b1]Stephanus Daniel Handoko:
Constraint-oriented refinement-efficacious memetic algorithms for efficient optimization of computationally-expensive problems. Nanyang Technological University, Singapore, 2013
Journal Articles
- 2016
- [j7]Stephanus Daniel Handoko, Hoong Chuin Lau
, Shih-Fen Cheng:
Achieving Economic and Environmental Sustainabilities in Urban Consolidation Center With Bicriteria Auction. IEEE Trans Autom. Sci. Eng. 13(4): 1471-1479 (2016) - 2015
- [j6]Amr Alhossary, Stephanus Daniel Handoko, Yuguang Mu, Chee Keong Kwoh:
Fast, accurate, and reliable molecular docking with QuickVina 2. Bioinform. 31(13): 2214-2216 (2015) - 2013
- [j5]Mostafa Mostafa Hashim Ellabaan, Yew-Soon Ong, Stephanus Daniel Handoko, Chee Keong Kwoh, H. Y. Man:
Discovering Unique, Low-Energy Transition States Using Evolutionary Molecular Memetic Computing. IEEE Comput. Intell. Mag. 8(3): 54-63 (2013) - 2012
- [j4]Mostafa Mostafa Hashim Ellabaan, Stephanus Daniel Handoko, Yew-Soon Ong, Chee Keong Kwoh, S. A. Bahnassy, F. M. Elassawy, H. Y. Man:
A tree-structured covalent-bond-driven molecular memetic algorithm for optimization of ring-deficient molecules. Comput. Math. Appl. 64(12): 3792-3804 (2012) - [j3]Stephanus Daniel Handoko, Xuchang Ouyang, Chinh Tran To Su, Chee Keong Kwoh, Yew-Soon Ong:
QuickVina: Accelerating AutoDock Vina Using Gradient-Based Heuristics for Global Optimization. IEEE ACM Trans. Comput. Biol. Bioinform. 9(5): 1266-1272 (2012) - [j2]Stephanus Daniel Handoko, Xuchang Ouyang, Chinh Tran To Su, Chee Keong Kwoh, Yew-Soon Ong:
Erratum to "QuickVina: Accelerating AutoDock Vina Using Gradient-Based Heuristics for Global Optimization". IEEE ACM Trans. Comput. Biol. Bioinform. 9(6): 1853 (2012) - 2010
- [j1]Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong:
Feasibility Structure Modeling: An Effective Chaperone for Constrained Memetic Algorithms. IEEE Trans. Evol. Comput. 14(5): 740-758 (2010)
Conference and Workshop Papers
- 2016
- [c19]Abhishek Gupta, Yew-Soon Ong, Bingshui Da, Liang Feng, Stephanus Daniel Handoko:
Landscape synergy in evolutionary multitasking. CEC 2016: 3076-3083 - [c18]Teck-Hou Teng, Stephanus Daniel Handoko, Hoong Chuin Lau:
Self-organizing Neural Network for Adaptive Operator Selection in Evolutionary Search. LION 2016: 187-202 - 2015
- [c17]Richard Jayadi Oentaryo, Stephanus Daniel Handoko, Hoong Chuin Lau:
Algorithm Selection via Ranking. AAAI 2015: 1826-1832 - [c16]Stephanus Daniel Handoko, Hoong Chuin Lau:
Efficient order sharing with privacy preservation via double auction with split delivery. CASE 2015: 69-74 - [c15]Stephanus Daniel Handoko, Hoong Chuin Lau, Abhishek Gupta, Yew-Soon Ong, Chen Kim Heng, Puay Siew Tan:
Solving multi-vehicle profitable tour problem via knowledge adoption in evolutionary bi-level programming. CEC 2015: 2713-2720 - [c14]Mustafa Misir, Stephanus Daniel Handoko, Hoong Chuin Lau:
ADVISER: A Web-Based Algorithm Portfolio Deviser. LION 2015: 23-28 - [c13]Mustafa Misir, Stephanus Daniel Handoko, Hoong Chuin Lau:
OSCAR: Online Selection of Algorithm Portfolios with Case Study on Memetic Algorithms. LION 2015: 59-73 - 2014
- [c12]Stephanus Daniel Handoko, Duc Thien Nguyen, Hoong Chuin Lau:
An auction mechanism for the last-mile deliveries via urban consolidation centre. CASE 2014: 607-612 - [c11]Stephanus Daniel Handoko, Duc Thien Nguyen, Zhi Yuan, Hoong Chuin Lau:
Reinforcement learning for adaptive operator selection in memetic search applied to quadratic assignment problem. GECCO (Companion) 2014: 193-194 - [c10]Mustafa Misir, Stephanus Daniel Handoko, Hoong Chuin Lau:
Building algorithm portfolios for memetic algorithms. GECCO (Companion) 2014: 197-198 - [c9]Zhi Yuan, Stephanus Daniel Handoko, Duc Thien Nguyen, Hoong Chuin Lau:
An Empirical Study of Off-Line Configuration and On-Line Adaptation in Operator Selection. LION 2014: 62-76 - [c8]Chen Wang, Stephanus Daniel Handoko, Hoong Chuin Lau:
An auction with rolling horizon for urban consolidation centre. SOLI 2014: 438-443 - 2011
- [c7]Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong, Jonathan H. Chan:
Classification-assisted memetic algorithms for solving optimization problems with restricted equality constraint function mapping. IEEE Congress on Evolutionary Computation 2011: 1209-1216 - 2010
- [c6]Stephanus Daniel Handoko, Chinh Tran To Su, Chee Keong Kwoh, Yew-Soon Ong:
Structural analysis of (TCR - )HLA/peptide complexes: An initial study. BIBM Workshops 2010: 63-66 - [c5]Chinh T. T. Su, Stephanus Daniel Handoko, Chee Keong Kwoh, Christian Schönbach, Xiaoli Li:
A possible mutation that enables H1N1 influenza a virus to escape antibody recognition. BIBM 2010: 81-84 - 2009
- [c4]Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong:
Classification-Assisted Memetic Algorithms for Equality-Constrained Optimization Problems. Australasian Conference on Artificial Intelligence 2009: 391-400 - 2008
- [c3]Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong, Meng-Hiot Lim:
A study on constrained MA using GA and SQP: Analytical vs. finite-difference gradients. IEEE Congress on Evolutionary Computation 2008: 4031-4038 - [c2]Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong:
Using classification for constrained memetic algorithm: A new paradigm. SMC 2008: 547-552 - 2006
- [c1]Stephanus Daniel Handoko, Chee Keong Kwoh, Yew-Soon Ong, Guanglan Zhang, Vladimir Brusic:
Extreme Learning Machine for Predicting HLA-Peptide Binding. ISNN (2) 2006: 716-721
Coauthor Index
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