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ORCIDTaijiao Jiang
Person information
- affiliation: Guangzhou Medical University, First Affiliated Hospital, State Key Laboratory of Respiratory Disease, China
- affiliation (former): Hunan University, College of Computer Science and Electronic Engineering, Changsha, China
- affiliation (former): Chinese Academy of Medical Sciences, Suzhou Institute of Systems Medicine, Beijing, China
- affiliation (former): Massachusetts Institute of Technology, Department of Biology, Cambridge, MA, USA
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2020 – today
- 2026
[j32]Lizong Deng
, Luming Chen, Mi Liu, Xuan Wang, Yifan Qi, Chunli Shao, Taijiao Jiang:
Knowledge from medical ontology can significantly enhance mainstream text embedding models in medical information retrieval. Inf. Process. Manag. 63(2): 104435 (2026)- 2025
- [j31]Jing Meng, Jiangyuan Wang, Jingze Liu, Wenkai Song, Ming Li, Aiping Wu, Taijiao Jiang:
TransSSVs: a Transformer-based deep learning model for accurate detection of somatic small variants in paired tumor and normal sequencing data. Appl. Intell. 55(12): 874 (2025) - [j30]Wenping Xie, Jingze Liu, Chuan Wang, Jiangyuan Wang, Wenjie Han, Yousong Peng, Xiangjun Du, Jing Meng, Kang Ning, Taijiao Jiang:
PREDAC-FluB: predicting antigenic clusters of seasonal influenza B viruses with protein language model embedding based convolutional neural network. Briefings Bioinform. 26(4) (2025) - [j29]Tao Yang, Luming Chen, Lizong Deng, Taijiao Jiang:
PhenoAlign: A Hybrid Data-Knowledge-Driven Approach for Precisely Aligning Phenotype Information in Medical Texts. IEEE J. Biomed. Health Informatics 29(12): 9147-9157 (2025) - 2024
- [j28]Jing Meng, Jingze Liu, Wenkai Song, Honglei Li, Jiangyuan Wang, Le Zhang, Yousong Peng, Aiping Wu, Taijiao Jiang:
PREDAC-CNN: predicting antigenic clusters of seasonal influenza A viruses with convolutional neural network. Briefings Bioinform. 25(2) (2024) - 2023
- [j27]Jie Deng, Yaohuang Shi, Xuemei Peng, Yuanlin He, Xiaoxue Chen, Mengxiao Li, Xiaowei Lin, Wenjian Liao, Yuanyin Huang, Taijiao Jiang, David M. J. Lilley, Zhichao Miao, Lin Huang:
Ribocentre: a database of ribozymes. Nucleic Acids Res. 51(D1): 262-268 (2023) - [j26]Luming Chen, Yifan Qi, Aiping Wu, Lizong Deng, Taijiao Jiang:
TeaBERT: An Efficient Knowledge Infused Cross-Lingual Language Model for Mapping Chinese Medical Entities to the Unified Medical Language System. IEEE J. Biomed. Health Informatics 27(12): 6029-6038 (2023) - 2022
- [j25]Zena Cai, Ping Fu, Ye Qiu, Aiping Wu, Gaihua Zhang, Yirong Wang, Taijiao Jiang, Xing-Yi Ge, Haizhen Zhu, Yousong Peng:
vsRNAfinder: a novel method for identifying high-confidence viral small RNAs from small RNA-Seq data. Briefings Bioinform. 23(6) (2022) - [j24]Sifan Ye, Congyu Lu, Ye Qiu, Heping Zheng, Xingyi Ge, Aiping Wu, Zanxian Xia, Taijiao Jiang, Haizhen Zhu, Yousong Peng:
An atlas of human viruses provides new insights into diversity and tissue tropism of human viruses. Bioinform. 38(11): 3087-3093 (2022) - [j23]Lizong Deng, Xu Zhang, Tao Yang, Mi Liu, Luming Chen, Taijiao Jiang:
PIAT: An Evolutionarily Intelligent System for Deep Phenotyping of Chinese Electronic Health Records. IEEE J. Biomed. Health Informatics 26(8): 4142-4152 (2022) - [c5]Luming Chen, Yifan Qi, Aiping Wu, Lizong Deng, Taijiao Jiang:
Enhancing Cross-lingual Medical Concept Alignment by Leveraging Synonyms and Translations of the Unified Medical Language System. HPCC/DSS/SmartCity/DependSys 2022: 2078-2083 - 2021
- [j22]Jingzhe Shang, Na Han, Ziyi Chen, Yousong Peng, Liang Li, Hangyu Zhou, Chengyang Ji, Jing Meng, Taijiao Jiang, Aiping Wu:
Compositional diversity and evolutionary pattern of coronavirus accessory proteins. Briefings Bioinform. 22(2): 1267-1278 (2021) - [j21]Zena Cai, Congyu Lu, Jun He, Li Liu, Yuanqiang Zou, Zheng Zhang, Zhaozhong Zhu, Xingyi Ge, Aiping Wu, Taijiao Jiang, Heping Zheng, Yousong Peng:
Identification and characterization of circRNAs encoded by MERS-CoV, SARS-CoV-1 and SARS-CoV-2. Briefings Bioinform. 22(2): 1297-1308 (2021) - [j20]Zena Cai, Yunshi Fan, Zheng Zhang, Congyu Lu, Zhaozhong Zhu, Taijiao Jiang, Tongling Shan, Yousong Peng:
VirusCircBase: a database of virus circular RNAs. Briefings Bioinform. 22(2): 2182-2190 (2021) - [j19]Jing Meng, Brandon Victor, Zhen He, Hongde Liu, Taijiao Jiang:
DeepSSV: detecting somatic small variants in paired tumor and normal sequencing data with convolutional neural network. Briefings Bioinform. 22(4) (2021) - [j18]Lin Liu, Qin Shen, Nan Li, Yuwen He, Na Han, Xianyue Wang, Jinxin Meng, Yousong Peng, Mei Pan, Yuting Jin, Taijiao Jiang, Wenjie Tan, Jinglin Wang, Aiping Wu:
Comparative viromes of Culicoides and mosquitoes reveal their consistency and diversity in viral profiles. Briefings Bioinform. 22(6) (2021) - [j17]Luyao Qin, Xiao Ding, Yongjie Li, Qingfeng Chen, Jing Meng, Taijiao Jiang:
Co-mutation modules capture the evolution and transmission patterns of SARS-CoV-2. Briefings Bioinform. 22(6) (2021) - [j16]Zhaozhong Zhu, Huiting Chen, Li Liu, Yang Cao, Taijiao Jiang, Yuanqiang Zou, Yousong Peng:
Classification and characterization of multigene family proteins of African swine fever viruses. Briefings Bioinform. 22(6) (2021) - 2020
- [j15]Xiao Ding, Xuye Yuan, Longfei Mao, Aiping Wu, Taijiao Jiang:
FluReassort: a database for the study of genomic reassortments among influenza viruses. Briefings Bioinform. 21(6): 2126-2132 (2020) - [j14]Zheng Zhang, Fen Yu, Yuanqiang Zou, Ye Qiu, Aiping Wu, Taijiao Jiang, Yousong Peng:
Phage protein receptors have multiple interaction partners and high expressions. Bioinform. 36(10): 2975-2979 (2020) - [j13]Congyu Lu, Zena Cai, Yuanqiang Zou, Zheng Zhang, Wenjun Chen, Lizong Deng, Xiangjun Du, Aiping Wu, Lei Yang, Dayan Wang, Yuelong Shu, Taijiao Jiang, Yousong Peng:
FluPhenotype - a one-stop platform for early warnings of the influenza A virus. Bioinform. 36(10): 3251-3253 (2020) - [j12]Kun Jiang, Tao Yang, Chunyan Wu, Luming Chen, Longfei Mao, Yongyou Wu, Lizong Deng, Taijiao Jiang:
LATTE: A knowledge-based method to normalize various expressions of laboratory test results in free text of Chinese electronic health records. J. Biomed. Informatics 102: 103372 (2020)
2010 – 2019
- 2019
- [j11]Zheng Zhang, Zhaozhong Zhu, Wenjun Chen, Zena Cai, Beibei Xu, Zhiying Tan, Aiping Wu, Xingyi Ge, Xinhong Guo, Zhongyang Tan, Zanxian Xia, Haizhen Zhu, Taijiao Jiang, Yousong Peng:
Cell membrane proteins with high N-glycosylation, high expression and multiple interaction partners are preferred by mammalian viruses as receptors. Bioinform. 35(5): 723-728 (2019) - 2018
- [c4]Haomiao Ni, Hong Liu, Zichao Guo, Xiangdong Wang, Taijiao Jiang, Kuansong Wang, Yueliang Qian:
Multiple Visual Fields Cascaded Convolutional Neural Network for Breast Cancer Detection. PRICAI (1) 2018: 531-544 - 2017
- [j10]Yuanqiang Zou, Zhiqiang Wu, Lizong Deng, Aiping Wu, Fan Wu, Kenli Li, Taijiao Jiang, Yousong Peng:
cooccurNet: an R package for co-occurrence network construction and analysis. Bioinform. 33(12): 1881-1882 (2017) - [c3]Yuanqiang Zou, Kenli Li, Taijiao Jiang, Yousong Peng:
Prediction of Cell Specific O-GalNAc Glycosylation in Human. ICPCSEE (2) 2017: 286-292 - [c2]Zhiying Tan, Beibei Xu, Kenli Li, Taijiao Jiang, Yousong Peng:
Predicting the Antigenic Variant of Human Influenza A(H3N2) Virus with a Stacked Auto-Encoder Model. ICPCSEE (2) 2017: 302-310 - 2016
- [j9]Yousong Peng, Lei Yang, Honglei Li, Yuanqiang Zou, Lizong Deng, Aiping Wu, Xiangjun Du, Dayan Wang, Yuelong Shu, Taijiao Jiang:
PREDAC-H3: a user-friendly platform for antigenic surveillance of human influenza a(H3N2) virus based on hemagglutinin sequences. Bioinform. 32(16): 2526-2527 (2016) - [j8]Wentao Dai, Aiping Wu, Liang-Xiao Ma, Yi-Xue Li, Taijiao Jiang, Yuan-Yuan Li:
A novel index of protein-protein interface propensity improves interface residue recognition. BMC Syst. Biol. 10(4): 381-392 (2016) - 2015
- [c1]Yuanqiang Zou, Yousong Peng, Li Lu, Taijiao Jiang, Lizong Deng:
Prediction of influenza epidemics at the province level in China using search query from "Haosou". FSKD 2015: 1450-1454 - 2014
- [j7]Lizong Deng, Aiping Wu, Wentao Dai, Tingrui Song, Ya Cui, Taijiao Jiang:
Exploring protein domain organization by recognition of secondary structure packing interfaces. Bioinform. 30(17): 2440-2446 (2014) - 2011
- [j6]Yang Cao, Lin Song, Zhichao Miao, Yun Hu, Liqing Tian, Taijiao Jiang:
Improved side-chain modeling by coupling clash-detection guided iterative search with rotamer relaxation. Bioinform. 27(6): 785-790 (2011) - [j5]Zhichao Miao, Yang Cao, Taijiao Jiang:
RASP: rapid modeling of protein side chain conformations. Bioinform. 27(22): 3117-3122 (2011) - [j4]Liqing Tian, Aiping Wu, Yang Cao, Xiaoxi Dong, Yun Hu, Taijiao Jiang:
NCACO-score: An effective main-chain dependent scoring function for structure modeling. BMC Bioinform. 12: 208 (2011) - 2010
- [j3]Aiping Wu, Yousong Peng, Xiangjun Du, Yuelong Shu, Taijiao Jiang:
Correlation of Influenza Virus Excess Mortality with Antigenic Variation: Application to Rapid Estimation of Influenza Mortality Burden. PLoS Comput. Biol. 6(8) (2010)
2000 – 2009
- 2006
- [j2]A. V. McDonnell, Taijiao Jiang, Amy E. Keating, Bonnie Berger:
Paircoil2: improved prediction of coiled coils from sequence. Bioinform. 22(3): 356-358 (2006) - 2005
- [j1]Taijiao Jiang, Amy E. Keating:
AVID: An integrative framework for discovering functional relationships among proteins. BMC Bioinform. 6: 136 (2005)
Coauthor Index
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