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2020 – today
- 2022
[j12]Anouck Becker
, Georges Pierre Schmartz, Laura Gröger, Nadja Liddy Grammes, Valentina Galata, Hannah Philippeit, Jacqueline Weiland, Nicole Ludwig, Eckart Meese, Sascha Tierling, Jörn Walter, Andreas Schwiertz, Jörg Spiegel, Gudrun Wagenpfeil, Klaus Faßbender, Andreas Keller, Marcus M. Unger:
Effects of Resistant Starch on Symptoms, Fecal Markers, and Gut Microbiota in Parkinson's Disease - The RESISTA-PD Trial. Genom. Proteom. Bioinform. 20(2): 274-287 (2022)- 2021
- [j11]Michael Scherer, Florian Schmidt, Olga Lazareva, Jörn Walter, Jan Baumbach, Marcel H. Schulz, Markus List:
Machine learning for deciphering cell heterogeneity and gene regulation. Nat. Comput. Sci. 1(3): 183-191 (2021) - 2020
- [j10]Nico Gerstner, Tim Kehl, Kerstin Lenhof, Anne Müller, Carolin Mayer, Lea Eckhart, Nadja Liddy Grammes, Caroline Diener, Martin Hart, Oliver Hahn, Jörn Walter, Tony Wyss-Coray, Eckart Meese, Andreas Keller, Hans-Peter Lenhof:
GeneTrail 3: advanced high-throughput enrichment analysis. Nucleic Acids Res. 48(Webserver-Issue): W515-W520 (2020)
2010 – 2019
- 2019
- [j9]Alexander Lück, Pascal Giehr, Karl Nordström, Jörn Walter, Verena Wolf:
Hidden Markov Modelling Reveals Neighborhood Dependence of Dnmt3a and 3b Activity. IEEE ACM Trans. Comput. Biol. Bioinform. 16(5): 1598-1609 (2019) - [c2]Charalampos Kyriakopoulos, Pascal Giehr, Alexander Lück, Jörn Walter, Verena Wolf:
A Hybrid HMM Approach for the Dynamics of DNA Methylation. HSB 2019: 117-131 - 2018
- [j8]Tim Kehl, Lara Schneider, Kathrin Kattler, Daniel Stöckel, Jenny Wegert, Nico Gerstner, Nicole Ludwig, Ute Distler, Markus Schick, Ulrich Keller, Stefan Tenzer, Manfred Gessler, Jörn Walter, Andreas Keller, Norbert M. Graf, Eckart Meese, Hans-Peter Lenhof:
REGGAE: a novel approach for the identification of key transcriptional regulators. Bioinform. 34(20): 3503-3510 (2018) - 2017
- [c1]Alexander Lück, Pascal Giehr, Jörn Walter, Verena Wolf:
A Stochastic Model for the Formation of Spatial Methylation Patterns. CMSB 2017: 160-178 - 2016
- [j7]Pascal Giehr, Charalampos Kyriakopoulos, Gabriella Ficz, Verena Wolf, Jörn Walter:
The Influence of Hydroxylation on Maintaining CpG Methylation Patterns: A Hidden Markov Model Approach. PLoS Comput. Biol. 12(5) (2016) - 2015
- [j6]Matthias Döring, Gilles Gasparoni, Jasmin Gries, Karl Nordström, Pavlo Lutsik, Jörn Walter, Nico Pfeifer:
Identification and analysis of methylation call differences between bisulfite microarray and bisulfite sequencing data with statistical learning techniques. BMC Bioinform. 16(S-3): A7 (2015) - 2014
- [j5]Junfang Chen, Pavlo Lutsik, Ruslan Akulenko, Jörn Walter, Volkhard Helms:
AKSmooth: Enhancing low-coverage bisulfite sequencing data via kernel-based smoothing. J. Bioinform. Comput. Biol. 12(6) (2014) - [j4]Daniel Becker, Pavlo Lutsik, Peter Ebert, Christoph Bock, Thomas Lengauer, Jörn Walter:
BiQ Analyzer HiMod: an interactive software tool for high-throughput locus-specific analysis of 5-methylcytosine and its oxidized derivatives. Nucleic Acids Res. 42(Webserver-Issue): 501-507 (2014) - 2011
- [j3]Pavlo Lutsik, Lars Feuerbach, Julia Arand, Thomas Lengauer, Jörn Walter, Christoph Bock:
BiQ Analyzer HT: locus-specific analysis of DNA methylation by high-throughput bisulfite sequencing. Nucleic Acids Res. 39(Web-Server-Issue): 551-556 (2011)
2000 – 2009
- 2007
- [j2]Christoph Bock, Jörn Walter, Martina Paulsen, Thomas Lengauer:
CpG Island Mapping by Epigenome Prediction. PLoS Comput. Biol. 3(6) (2007) - 2005
- [j1]Christoph Bock, Sabine Reither, Thomas Mikeska, Martina Paulsen, Jörn Walter, Thomas Lengauer:
BiQ Analyzer: visualization and quality control for DNA methylation data from bisulfite sequencing. Bioinform. 21(21): 4067-4068 (2005)
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