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ORCIDEvgenia V. Kriventseva
Publications
- 2023
[j17]Dmitry Kuznetsov, Fredrik Tegenfeldt, Mosè Manni, Mathieu Seppey
, Matthew Berkeley, Evgenia V. Kriventseva, Evgeny M. Zdobnov:
OrthoDB v11: annotation of orthologs in the widest sampling of organismal diversity. Nucleic Acids Res. 51(D1): 445-451 (2023)- 2021
- [j16]Evgeny M. Zdobnov, Dmitry Kuznetsov, Fredrik Tegenfeldt, Mosè Manni, Matthew Berkeley, Evgenia V. Kriventseva:
OrthoDB in 2020: evolutionary and functional annotations of orthologs. Nucleic Acids Res. 49(Database-Issue): D389-D393 (2021) - 2019
- [j15]Evgenia V. Kriventseva, Dmitry Kuznetsov, Fredrik Tegenfeldt, Mosè Manni, Renata Dias, Felipe A. Simão, Evgeny M. Zdobnov:
OrthoDB v10: sampling the diversity of animal, plant, fungal, protist, bacterial and viral genomes for evolutionary and functional annotations of orthologs. Nucleic Acids Res. 47(Database-Issue): D807-D811 (2019) - 2017
- [j14]Evgeny M. Zdobnov, Fredrik Tegenfeldt, Dmitry Kuznetsov, Robert M. Waterhouse, Felipe A. Simão, Panagiotis Ioannidis, Mathieu Seppey, Alexis Loetscher, Evgenia V. Kriventseva:
OrthoDB v9.1: cataloging evolutionary and functional annotations for animal, fungal, plant, archaeal, bacterial and viral orthologs. Nucleic Acids Res. 45(Database-Issue): D744-D749 (2017) - 2015
- [j13]Felipe A. Simão, Robert M. Waterhouse, Panagiotis Ioannidis, Evgenia V. Kriventseva, Evgeny M. Zdobnov:
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs. Bioinform. 31(19): 3210-3212 (2015) - [j12]Evgenia V. Kriventseva, Fredrik Tegenfeldt, Tom J. Petty, Robert M. Waterhouse, Felipe A. Simão, Igor A. Pozdnyakov, Panagiotis Ioannidis, Evgeny M. Zdobnov:
OrthoDB v8: update of the hierarchical catalog of orthologs and the underlying free software. Nucleic Acids Res. 43(Database-Issue): 250-256 (2015) - 2013
- [j11]Robert M. Waterhouse, Fredrik Tegenfeldt, Jia Li, Evgeny M. Zdobnov, Evgenia V. Kriventseva:
OrthoDB: a hierarchical catalog of animal, fungal and bacterial orthologs. Nucleic Acids Res. 41(Database-Issue): 358-365 (2013) - 2011
- [j10]Robert M. Waterhouse, Evgeny M. Zdobnov, Fredrik Tegenfeldt, Jia Li, Evgenia V. Kriventseva:
OrthoDB: the hierarchical catalog of eukaryotic orthologs in 2011. Nucleic Acids Res. 39(Database-Issue): 283-288 (2011) - 2009
- [j9]Daniel Gerlach, Evgenia V. Kriventseva, Nazim Rahman, Charles E. Vejnar, Evgeni M. Zdobnov:
miROrtho: computational survey of microRNA genes. Nucleic Acids Res. 37(Database-Issue): 111-117 (2009) - 2008
- [j8]Evgenia V. Kriventseva, Nazim Rahman, Octavio Espinosa, Evgeni M. Zdobnov:
OrthoDB: the hierarchical catalog of eukaryotic orthologs. Nucleic Acids Res. 36(Database-Issue): 271-275 (2008) - 2003
- [j7]Evgenia V. Kriventseva, Florence Servant, Rolf Apweiler:
Improvements to CluSTr: the database of SWISS-PROT+TrEMBL protein clusters. Nucleic Acids Res. 31(1): 388-389 (2003) - [j6]Manuela Pruess, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Florence Servant, Rolf Apweiler:
The Proteome Analysis database: a tool for the in silico analysis of whole proteomes. Nucleic Acids Res. 31(1): 414-417 (2003) - 2002
- [j5]Margaret Biswas, Joseph F. O'Rourke, Evelyn Camon, Gillian Fraser, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Florence Servant, Rolf Apweiler:
Applications of InterPro in Protein Annotation and Genome Analysis. Briefings Bioinform. 3(3): 285-295 (2002) - [j4]Alexander Kanapin, Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Florence Servant, Evgeni M. Zdobnov:
Interactive InterPro-based comparisons of proteins in whole genomes. Bioinform. 18(2): 374-375 (2002) - [c3]Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Evgenia V. Kriventseva, Nicola J. Mulder:
Automation of Protein Sequence Characterization and Its Application in Whole Proteome Analysis. Gene Regulations and Metabolism 2002: 19-47 - [c2]Stéphanie Boué, Martin Vingron, Evgenia V. Kriventseva, Ina Koch:
Theoretical analysis of alternative splice forms using computational methods. ECCB 2002: 65-73 - 2001
- [j3]Evgenia V. Kriventseva, Wolfgang Fleischmann, Evgeni M. Zdobnov, Rolf Apweiler:
CluSTr: a database of clusters of SWISS-PROT+TrEMBL proteins. Nucleic Acids Res. 29(1): 33-36 (2001) - [j2]Rolf Apweiler, Margaret Biswas, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Isabelle Phan, Evgeni M. Zdobnov:
Proteome Analysis Database: online application of InterPro and CluSTr for the functional classification of proteins in whole genomes. Nucleic Acids Res. 29(1): 44-48 (2001) - 2000
- [j1]Steffen Möller, Evgenia V. Kriventseva, Rolf Apweiler:
A collection of well characterised integral membrane proteins. Bioinform. 16(12): 1159-1160 (2000) - [c1]Margaret Biswas, Rolf Apweiler, Wolfgang Fleischmann, Alexander Kanapin, Youla Karavidopoulou, Paul J. Kersey, Evgenia V. Kriventseva, Virginie Mittard, Nicola J. Mulder, Thomas M. Oinn, Isabelle Phan, Evgeni M. Zdobnov:
Proteome Analysis: Application of InterPro and CluSTr for the Functional Classification of Proteins in Whole Genomes. German Conference on Bioinformatics 2000: 149-158
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