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ORCIDBSB 2005: Sao Leopoldo, Brazil
- João C. Setubal, Sergio Verjovski-Almeida
:
Advances in Bioinformatics and Computational Biology, Brazilian Symposium on Bioinformatics, BSB 2005, Sao Leopoldo, Brazil, July 27-29, 2005, Proceedings. Lecture Notes in Computer Science 3594, Springer 2005, ISBN 3-540-28008-1
Invited Papers
- Irene S. Gabashvili, Richard J. Carter, Peter W. Markstein, Anne B. S. Giersch:
Differential Gene Expression in the Auditory System. 1-8 - Walter L. Ruzzo:
Searching for Non-coding RNA. 9-10 - Bruno W. S. Sobral:
Cyberinfrastructure for PathoSystems Biology. 11-27 - Joel S. Rozowsky, Paul Bertone, Thomas E. Royce, Sherman Weissman, Michael Snyder, Mark Gerstein:
Analysis of Genomic Tiling Microarrays for Transcript Mapping and the Identification of Transcription Factor Binding Sites. 28-29
Full Papers
- R. Nigam, S. Liang:
Perturbing Thermodynamically Unfeasible Metabolic Networks. 30-41 - Ana Carolina Lorena, André Carlos Ponce de Leon Ferreira de Carvalho:
Protein Cellular Localization with Multiclass Support Vector Machines and Decision Trees. 42-53 - Eduardo Jaques Spinosa, André Carlos Ponce de Leon Ferreira de Carvalho:
Combining One-Class Classifiers for Robust Novelty Detection in Gene Expression Data. 54-64 - Katti Faceli, André Carlos Ponce de Leon Ferreira de Carvalho, Marcílio Carlos Pereira de Souto:
Evaluation of the Contents of Partitions Obtained with Clustering Gene Expression Data. 65-76 - Meika I. Monteiro, Marcílio Carlos Pereira de Souto, Luiz M. G. Gonçalves, Lucymara F. Agnez-Lima:
Machine Learning Techniques for Predicting Bacillus subtilis Promoters. 77-84 - Adriana Neves dos Reis, Ney Lemke:
An Improved Hidden Markov Model Methodology to Discover Prokaryotic Promoters. 85-94 - Marcelo Cezar Pinto, Luciana Foss, José C. M. Mombach, Leila Ribeiro:
Modeling and Property Verification of Lactose Operon Regulation. 95-106 - Guilherme Balestieri Bedin, Ney Lemke:
YAMONES: A Computational Architecture for Molecular Network Simulation. 107-117 - Cláudia Lemelle Fernandes, Diógenes Santiago Santos, Luiz Augusto Basso, Osmar Norberto de Souza:
Structure Prediction and Docking Studies of Chorismate Synthase from Mycobacterium Tuberculosis. 118-127 - Georgios Joannis Pappas Jr., Shankar Subramaniam:
Analysis of the Effects of Multiple Sequence Alignments in Protein Secondary Structure Prediction. 128-140 - Maurício de Alvarenga Mudado, Estevam Bravo-Neto, José Miguel Ortega:
Tests of Automatic Annotation Using KOG Proteins and ESTs from 4 Eukariotic Organisms. 141-152 - Francisco Prosdocimi, José Miguel Ortega:
Diet as a Pressure on the Amino Acid Content of Proteomes. 153-159 - Guilherme P. Telles, Marcelo M. Brigido, Nalvo F. Almeida, Carlos Juliano M. Viana, Daniel A. S. Anjos, Maria Emília Telles Walter:
A Method for Comparing Three Genomes. 160-169 - Miguel Galves, Zanoni Dias:
Comparison of Genomic DNA to cDNA Alignment Methods. 170-180 - Elaine Ribeiro de Faria, Denise Guliato, Jean Carlo de Sousa Santos:
Segmentation and Centromere Locating Methods Applied to Fish Chromosomes Images. 181-189
Extended Abstracts
- Florencia G. Leonardi, Antonio Galves:
Sequence Motif Identification and Protein Family Classification Using Probabilistic Trees. 190-193 - Fabiano Pazzini, Fernanda Oliveira, Jorge A. Guimarães, Hermes Luís Neubauer de Amorim:
Prediction of Myotoxic and Neurotoxic Activities in Phospholipases A2 from Primary Sequence Analysis. 194-197 - Thiago M. Venancio, Ricardo DeMarco, Katia C. P. Oliveira, Ana Carolina Quirino Simoes, Aline Maria da Silva, Sergio Verjovski-Almeida:
Genomics and Gene Expression Management Tools for the Schistosoma Mansoni cDNA Microarray Project. 198-201 - Ana Carolina Quirino Simoes, Aline Maria da Silva, Sergio Verjovski-Almeida, Eduardo M. Reis:
SAM Method as an Approach to Select Candidates for Human Prostate Cancer Markers. 202-205 - Christian Baudet, Zanoni Dias:
New EST Trimming Strategy. 206-209 - Rodrigo de Castro Miranda, Mauricio Ayala-Rincón:
A Modification of the Landau-Vishkin Algorithm Computing Longest Common Extensions via Suffix Arrays. 210-213 - Alan Wilter, Carla Osthoff, Cristiane Oliveira, Diego Enry Barreto Gomes, Eduardo Hill, Laurent Emmanuel Dardenne, Patrícia M. Barros, Pedro A. A. G. L. Loureiro, Reynaldo Novaes, Pedro Geraldo Pascutti:
The BioPAUÁ Project: A Portal for Molecular Dynamics Using Grid Environment. 214-217 - Dino Franklin, Ivan da Silva Sendin:
Analysis of Structure Prediction Tools in Mutated MeCP-2. 218-221 - Armando Vieira, Baldomero Oliva:
Protein Loop Classification Using Artificial Neural Networks. 222-225 - Ricardo M. Czekster, Osmar Norberto de Souza:
VIZ - A Graphical Open-Source Architecture for Use in Structural Bioinformatics. 226-229 - Ana L. C. Bazzan, Cássia Trojahn dos Santos:
Selection of Data Sets of Motifs as Attributes in the Process of Automating the Annotation of Proteins' Keywords. 230-233 - Ardala Breda, Cláudia Lemelle Fernandes, Sabrina Esteves de Matos Almeida, Heitor Moreira Franco, Maria Lúcia Rosa Rossetti, Rosângela Rodrigues, Luís Fernando Brígido, Elizabeth Cortez-Herrera:
Bioinformatics Tools for HIV-1 Identification in Southern Brazilian States. 234-237 - Luciano A. Digiampietri, Julia M. Perdigueiro, Aloisio J. de Almeida Junior, Daniel M. Faria, Éric Hainer Ostroski, Gustavo G. L. Costa, Marcelo C. Perez:
Fact and Task Oriented System for Genome Assembly and Annotation. 238-241 - João Francisco Valiati, Paulo Martins Engel:
A Clustering Strategy to Find Similarities in Mycoplasma Promoters. 242-245 - Said Sadique Adi, Carlos Eduardo Ferreira:
Gene Prediction by Syntenic Alignment. 246-250 - Ilana de Almeida Souza, Claudiney Sanches Jr., André Luiz Miranda da Rosa, Patrícia Trautenmüller, Thiago Tognoli Lopes, Marcelo Knörich Zuffo:
Real Time Immersive Visualization and Manipulation of the Visible Human Data Set. 251-256
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