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ORCID21st ISBRA 2025: Helsinki, Finland - Part II
- Jing Tang
, Xin Lai, Zhipeng Cai, Wei Peng, Yanjie Wei:
Bioinformatics Research and Applications - 21st International Symposium, ISBRA 2025, Helsinki, Finland, August 3-5, 2025, Proceedings, Part II. Lecture Notes in Computer Science 15757, Springer 2026, ISBN 978-981-95-0694-1 - Saisai Ma, Xuehua Bi, Linlin Zhang, Haifeng Xu, Kai Zhao:
Prediction of High-Altitude Pulmonary Edema Based on Resampling and Ensemble Learning. 1-13 - Chunyang Jiang, Yuanbo Guo, Linlin Zhang, Xuehua Bi, Kai Zhao:
LGFMDA: miRNA-Disease Association Prediction with Local and Global Feature Representation Learning. 14-25 - Yang Jiao, Mingzhe Cui, Tao Chen, Ruibin Bai, Yi Pan:
TSCF-Net: A Temporal-Spectral Cross-Fusion Network for Low-Channel EEG Motor Imagery Classification. 26-37 - Jiancun Zhou, Hulin Kuang, Jian-xin Wang:
HCM-Net: Hybrid CNN and Mamba Network with Multi-scale Awareness Feature Fusion for Lung Cancer Pathological Complete Response Prediction. 38-48 - Shicheng Ma, Weiyang Liang, Kai Zhao, Xuehua Bi, Linlin Zhang:
PrePSL: A Pre-training Method for Protein Subcellular Localization Using Graph Auto-encoder and Protein Language Model. 49-60 - Zhipeng Gao, Kai Zhao, Guanglei Yu, Xuehua Bi, Linlin Zhang:
MOGATFF: An Explainable Multi-Omics Prediction Model with Feature Enhancement for Genotype-Phenotype Association Analysis. 61-72 - Juan He, Xiaoyan Wang, Yi Pan, Zhengshan Wang, Bokai Yang, Zhiming Zhang, Tzu-Ming Liu, Yunpeng Cai, Long Chen, Ruitao Xie:
Accurate and Interpretable Wound Healing Progress Detection Based on a Task-Related Knowledge Refinement Learning Method. 73-85 - Bolin Chen, Jianjun Zhang, Weihua Meng, Youpeng Hu, Yuhang Li, Xinyue Hu, Zhouning Xu, Zhengyu Wang, Xingyu Liao, Xingyi Li:
A Novel Weighted Network Control Model for Identifying Coding and Non-coding Drivers in Cancer. 86-97 - Xinyue Xu, Wei Peng, Wei Dai, Xiaodong Fu, Li Liu, Lijun Liu:
A Survival Prediction Model Integrating Hierarchical Pathological Image and Pathway Features. 98-109 - Yajun Liu, Fan Zhang, Yulian Ding, Aimin Li, Rong Fei:
Identification of piRNA-Disease Association Based on Contrastive Learning. 110-122 - Lei Chu, Hongyan Wu, Yi Pan:
Autonomous Generation of an Autism Knowledge Question-and-Answer Dataset Using Large Language Models. 123-138 - Nidhibahen Shah, Joyanta Basak, Sartaj Sahni, Anup Mathur, Krista Park, Daniel Weinberg, Sanguthevar Rajasekaran:
Double Metaphone Blocking: An Innovative Blocking Approach to Record Linkage. 139-150 - Denis Skibinski, Thomas Spicher, Leonhard Sidl, Paulína Holotová, Yingjie Pan, Maximilian Faissner, Cristian A. Velandia-Huerto, Ronny Lorenz, Maria Waldl, Hua-Ting Yao, Peter F. Stadler:
Integrating High-Throughput RNA-RNA Interaction Data Into RNA Secondary Structure Prediction. 151-162 - Manjir Gurung, Ronald Bbosa, Kafui Efio-Akolly, Feng Liu, Ruoshan Kong:
GDCA-TransUNet for Dual-Stage Attention Enhanced Multi-organ Segmentation in Abdominal CT Images. 163-176 - Po-Yu Liang, Jun Bai:
E(3)-Invariant Diffusion Model for Pocket-Aware Peptide Generation. 177-189 - C. Malcolm Todd, Yuan Tian, Nathaniel Osgood, Ian McQuillan, Lingling Jin:
Simulating Viral Evolution and Immune Escape Reinfection Dynamics Using Agent-Based Modelling. 190-202 - Nicola Rizzo, Manuel Cáceres, Veli Mäkinen:
Practical Colinear Chaining on Sequences Revisited. 203-216 - Hongyu Duan, Ziyan Li, Yixuan Wu, Bozhen Ren, Wen Chen, Fanghua Wang, Dongming Lan, Yonghua Wang, Li C. Xia:
EnzHier: Accurate Enzyme Function Prediction Through Multi-scale Feature Integration and Hierarchical Contrastive Learning. 217-227 - Cheng Xu, Mingzhao Wang, Jinyan Li, Juanying Xie:
Bidirectional Position-Context Feature Representation for Predicting DNA/RNA Modification Sites. 228-240 - Feng Deng, Yi Tang, Qinghua Fu, Lin Guo, Ying An:
Optical Flow-Augmented Dual-Stream Network for Left Ventricular Ejection Fraction Prediction. 241-252 - Rwan Ahmed, Kang Jiang, Fang-Xiang Wu:
Joint Sparse Precision Matrix Estimation for Cancer Diagnosis. 253-264 - Maocheng Cao, Zhelang Deng, Qiucheng Miao, Jintao Meng, Yanjie Wei, Jiefeng Cheng:
An Efficient Parallel List Ranking Algorithm for Graph Concatenation on BSP Graph System. 265-278 - Xiang Chen, Wenfeng He, Junnan Yu, Zhaoyu Fang:
scCMA: A Contrastive Masked Autoencoder for Single-Cell RNA-Seq Embedding. 279-294 - Minzhu Xie, Dongze Deng, Yabin Kuang:
Drug-Target Interaction Prediction via Substructure Similarity-Guided Denoising and Hierarchical Feature Fusion. 295-306 - Jianxin Wang, Hongdong Li, Guihua Duan, Jin Liu, Min Li:
Bioinformatics Course Reform Through Projects Integrating History, Theory, and Practice. 307-319 - Jian Wang, Yiding Zhang, Zhengyang Song, Ting Cheng:
BiGDC-BrainAgeNet: Enhancing EEG-Based Brain Age Prediction with Bidirectional Graph Diffusion Convolutions. 320-332 - Haoze Du, Shumei Hou, Xiaolei Wang, Bin Sun, Dongfang Zhang, Junliang Du, Qingkai Hu, Weifeng Guo, Xianfang Wang:
CT-Semi-net: Segmentation of Infected Areas in Lung CT Images Based on Attention Mechanism and Semi-supervised Learning. 333-346 - Yunzhi Qiu, Bo Zhang, Haohao Zhu, Changrong Min, Haifeng Liu, Tongxuan Zhang, Liang Yang, Hongfei Lin:
Dynamic Knowledge-Aware LLM for Adverse Drug Reaction Entity Recognition. 347-358 - Yu Sheng, Yiyi Hong, Yongchang Jia, Guihua Duan:
LiteSCTransNet: Lightweight CNN-Transformer for 3D Medical Image Segmentation. 359-370 - Jiale Wen, Xiao Lan, Yaru Chen, Kamen Ivanov, Jia Gu, Shifu Chen:
ACMSI: An Innovative Automated Analysis Application Utilizing Computer Vision for Accurate Microsatellite Instability Classification. 371-382 - Xiaochuan Chen, Jianqiang Zheng, Zhenni Huang, Ziqi Xu, Junye Huang, Yueyi Tan, Yanjie Wei, Huiling Zhang:
AlloPED: Leveraging Protein Language Models and Structure Features for Allosteric Site Prediction. 383-397 - Feng Shi, Zhanglian Lin, Xin Zeng, Jingyi Liu:
Parameterized Algorithms for the Tree Containment Problem on Multifurcating Phylogenetic Network. 398-410 - Duo Feng, Shuaicheng Li, Yue Zhang:
Automated Prediction of Protein Pair Distances Based on Deep Learning: A Novel Approach to Protein Structure Prediction in SCOP. 411-426
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