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ORCID10. CMSB 2012: London, UK
- David R. Gilbert, Monika Heiner:
Computational Methods in Systems Biology - 10th International Conference, CMSB 2012, London, UK, October 3-5, 2012. Proceedings. Lecture Notes in Computer Science 7605, Springer 2012, ISBN 978-3-642-33635-5
Invited Talks
- Denis Noble:
Differential and Integral Views of Gene-Phenotype Relations: A Systems Biological Insight. 1 - Matthew Gibb, Rebecca Burton
, Christian Bollensdorff, Carlos Afonso, Tahier Mansoori, Ulrich Schotten, David Gavaghan, Blanca Rodríguez, Jürgen E. Schneider, Peter Kohl, Vicente Grau:
Resolving the Three-Dimensional Histology of the Heart. 2-16 - Maciej Dobrzynski, Dirk Fey, Lan K. Nguyen, Boris N. Kholodenko:
Bimodal Protein Distributions in Heterogeneous Oscillating Systems. 17-28
Regular Papers
- Paolo Ballarini, Jarno Mäkelä, Andre S. Ribeiro:
Expressive Statistical Model Checking of Genetic Networks with Delayed Stochastic Dynamics. 29-48 - Kirill Batmanov, Céline Kuttler, François Lemaire, Cédric Lhoussaine, Cristian Versari:
Symmetry-Based Model Reduction for Approximate Stochastic Analysis. 49-68 - Laura Bennett, Artem Lysenko, Lazaros G. Papageorgiou, Martin Urban, Kim E. Hammond-Kosack, Christopher J. Rawlings, Mansoor A. S. Saqi, Sophia Tsoka:
Detection of Multi-clustered Genes and Community Structure for the Plant Pathogenic Fungus Fusarium graminearum. 69-86 - Mary Ann Blätke, Monika Heiner, Wolfgang Marwan:
Predicting Phenotype from Genotype through Automatically Composed Petri Nets. 87-106 - Alfonso Carta, Madalena Chaves, Jean-Luc Gouzé:
A Simple Model to Control Growth Rate of Synthetic E. coli during the Exponential Phase: Model Analysis and Parameter Estimation. 107-126 - Jole Costanza, Giovanni Carapezza, Claudio Angione, Pietro Liò, Giuseppe Nicosia:
Multi-objective Optimisation, Sensitivity and Robustness Analysis in FBA Modelling. 127-147 - Franck Delaplace, Hanna Klaudel, Tarek Melliti, Sylvain Sené:
Analysis of Modular Organisation of Interaction Networks Based on Asymptotic Dynamics. 148-165 - Maxime Folschette, Loïc Paulevé, Katsumi Inoue, Morgan Magnin, Olivier F. Roux:
Concretizing the Process Hitting into Biological Regulatory Networks. 166-186 - Ibuki Kawamata, Nathanael Aubert, Masahiro Hamano, Masami Hagiya:
Abstraction of Graph-Based Models of Bio-molecular Reaction Systems for Efficient Simulation. 187-206 - Hannes Klarner, Adam Streck, David Safránek, Juraj Kolcák, Heike Siebert:
Parameter Identification and Model Ranking of Thomas Networks. 207-226 - David Marco, Erin Scott, David E. Cairns, Andrea L. Graham, Judi Allen, Simmi Mahajan, Carron Shankland:
Investigating Co-infection Dynamics through Evolution of Bio-PEPA Model Parameters: A Combined Process Algebra and Evolutionary Computing Approach. 227-246 - Miguel A. Martínez-del-Amor, Ignacio Pérez-Hurtado, Adolfo Gastalver-Rubio, Anne C. Elster, Mario J. Pérez-Jiménez:
Population Dynamics P Systems on CUDA. 247-266 - Abhishek Murthy, Md. Ariful Islam, Ezio Bartocci, Elizabeth Cherry, Flavio H. Fenton, James Glimm, Scott A. Smolka, Radu Grosu:
Approximate Bisimulations for Sodium Channel Dynamics. 267-287 - Aurélien Naldi, Pedro T. Monteiro, Claudine Chaouiya:
Efficient Handling of Large Signalling-Regulatory Networks by Focusing on Their Core Control. 288-306 - Ilya Potapov, Jarno Mäkelä, Olli Yli-Harja, Andre S. Ribeiro:
Sequence Dependent Properties of the Expression Dynamics of Genes and Gene Networks. 307-321 - Sriram Sankaranarayanan, Georgios Fainekos:
Simulating Insulin Infusion Pump Risks by In-Silico Modeling of the Insulin-Glucose Regulatory System. 322-341 - Santiago Videla, Carito Guziolowski, Federica Eduati, Sven Thiele, Niels Grabe, Julio Saez-Rodriguez, Anne Siegel:
Revisiting the Training of Logic Models of Protein Signaling Networks with ASP. 342-361
Flash Posters
- Mary Ann Blätke, Anna Dittrich, Monika Heiner, Fred Schaper, Wolfgang Marwan:
JAK-STAT Signalling as Example for a Database-Supported Modular Modelling Concept. 362-365 - Joseph O. Dada, Pedro Mendes:
ManyCell: A Multiscale Simulator for Cellular Systems. 366-369 - François Fages, Steven Gay, Sylvain Soliman:
Inferring Reaction Models from ODEs. 370-373 - Vashti Galpin:
Modelling Trafficking of Proteins within the Mammalian Cell Using Bio-PEPA. 374-377 - Russell Harmer, Jean Krivine, Élise Laruelle, Cédric Lhoussaine, Guillaume Madelaine, Mirabelle Nebut:
Models of Tet-On System with Epigenetic Effects. 378-381 - Asta Laiho, András Király, Attila Gyenesei:
GeneFuncster: A Web Tool for Gene Functional Enrichment Analysis and Visualisation. 382-385 - Ilya Potapov, Evgenii I. Volkov:
Effects of Molecular Noise on the Multistability in a Synthetic Genetic Oscillator. 386-389 - Larisa N. Soldatova, Qian Gao, David R. Gilbert:
Towards an Ontology of Biomodelling. 390-393
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