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Publication search results
found 75 matches
- 2024
- Nathanael Sheehan, Federico Botta, Sabina Leonelli:
Unrestricted Versus Regulated Open Data Governance: A Bibliometric Comparison of SARS-CoV-2 Nucleotide Sequence Databases. Data Sci. J. 23 (2024) - Rituparna Sinha, Rajat Kumar Pal, Rajat K. De:
ENLIGHTENMENT: A Scalable Annotated Database of Genomics and NGS-Based Nucleotide Level Profiles. IEEE ACM Trans. Comput. Biol. Bioinform. 21(1): 155-168 (2024) - 2023
- Rachana Dande, Ramasubbu Sankararamakrishnan:
dbAQP-SNP: a database of missense single-nucleotide polymorphisms in human aquaporins. Database J. Biol. Databases Curation 2023 (2023) - Andrea Vandelli, Magdalena Arnal Segura, Michele Monti, Jonathan Fiorentino, Laura Broglia, Alessio Colantoni, Natalia Sanchez de Groot, Marc Torrent Burgas, Alexandros Armaos, Gian Gaetano Tartaglia:
The PRALINE database: protein and Rna humAn singLe nucleotIde variaNts in condEnsates. Bioinform. 39(1) (2023) - 2021
- Wen-Ya Zhang, Junhai Xu, Jun Wang, Yuan-Ke Zhou, Wei Chen, Pu-Feng Du:
KNIndex: a comprehensive database of physicochemical properties for k-tuple nucleotides. Briefings Bioinform. 22(4) (2021) - Masanori Arita, Ilene Karsch-Mizrachi, Guy Cochrane:
The international nucleotide sequence database collaboration. Nucleic Acids Res. 49(Database-Issue): D121-D124 (2021) - Peter W. Harrison, Alisha Ahamed, Raheela Aslam, Blaise T. F. Alako, Josephine Burgin, Nicola Buso, Mélanie Courtot, Jun Fan, Dipayan Gupta, Muhammad Haseeb, Sam Holt, Talal Ibrahim, Eugene Ivanov, Suran Jayathilaka, Vishnukumar Balavenkataraman Kadhirvelu, Manish Kumar, Rodrigo Lopez, Simon Kay, Rasko Leinonen, Xin Liu, Colman O'Cathail, Amir Pakseresht, Young Mi Park, Stephane Pesant, Nadim Rahman, Jeena Rajan, Alexey Sokolov, Senthilnathan Vijayaraja, Zahra Waheed, Ahmad Zyoud, Tony Burdett, Guy Cochrane:
The European Nucleotide Archive in 2020. Nucleic Acids Res. 49(Database-Issue): D82-D85 (2021) - 2020
- Clara Amid, Blaise T. F. Alako, Vishnukumar Balavenkataraman Kadhirvelu, Tony Burdett, Josephine Burgin, Jun Fan, Peter W. Harrison, Sam Holt, Abdulrahman Hussein, Eugene Ivanov, Suran Jayathilaka, Simon Kay, Thomas M. Keane, Rasko Leinonen, Xin Liu, Josué Martínez-Villacorta, Annalisa Milano, Amir Pakseresht, Nadim Rahman, Jeena Rajan, Kethi Reddy, Edward Richards, Dmitriy Smirnov, Alexey Sokolov, Senthilnathan Vijayaraja, Guy Cochrane:
The European Nucleotide Archive in 2019. Nucleic Acids Res. 48(Database-Issue): D70-D76 (2020) - 2019
- Peter W. Harrison, Blaise T. F. Alako, Clara Amid, Ana Cerdeño-Tárraga, Iain Cleland, Sam Holt, Abdulrahman Hussein, Suran Jayathilaka, Simon Kay, Thomas M. Keane, Rasko Leinonen, Xin Liu, Josué Martínez-Villacorta, Annalisa Milano, Nima Pakseresht, Jeena Rajan, Kethi Reddy, Edward Richards, Marc Rossello, Nicole Silvester, Dmitriy Smirnov, Ana Luisa Toribio, Senthilnathan Vijayaraja, Guy Cochrane:
The European Nucleotide Archive in 2018. Nucleic Acids Res. 47(Database-Issue): D84-D88 (2019) - 2018
- Ilene Karsch-Mizrachi, Toshihisa Takagi, Guy Cochrane:
The international nucleotide sequence database collaboration. Nucleic Acids Res. 46(Database-Issue): D48-D51 (2018) - Nicole Silvester, Blaise T. F. Alako, Clara Amid, Ana Cerdeño-Tárraga, Laura Clarke, Iain Cleland, Peter W. Harrison, Suran Jayathilaka, Simon Kay, Thomas M. Keane, Rasko Leinonen, Xin Liu, Josué Martínez-Villacorta, Manuela Menchi, Kethi Reddy, Nima Pakseresht, Jeena Rajan, Marc Rossello, Dmitriy Smirnov, Ana Luisa Toribio, Daniel Vaughan, Vadim Zalunin, Guy Cochrane:
The European Nucleotide Archive in 2017. Nucleic Acids Res. 46(Database-Issue): D36-D40 (2018) - 2017
- Qingyu Chen, Justin Zobel, Karin Verspoor:
Duplicates, redundancies and inconsistencies in the primary nucleotide databases: a descriptive study. Database J. Biol. Databases Curation 2017: baw163 (2017) - Ying Niu, Xuncai Zhang, Feng Han:
Image Encryption Algorithm Based on Hyperchaotic Maps and Nucleotide Sequences Database. Comput. Intell. Neurosci. 2017: 4079793:1-4079793:9 (2017) - Ana Luisa Toribio, Blaise T. F. Alako, Clara Amid, Ana Cerdeño-Tárraga, Laura Clarke, Iain Cleland, Susan Fairley, Richard Gibson, Neil Goodgame, Petra ten Hoopen, Suran Jayathilaka, Simon Kay, Rasko Leinonen, Xin Liu, Josué Martínez-Villacorta, Nima Pakseresht, Jeena Rajan, Kethi Reddy, Marc Rossello, Nicole Silvester, Dimitriy Smirnov, Daniel Vaughan, Vadim Zalunin, Guy Cochrane:
European Nucleotide Archive in 2016. Nucleic Acids Res. 45(Database-Issue): D32-D36 (2017) - 2016
- Matsuyuki Shirota, Kengo Kinoshita:
Discrepancies between human DNA, mRNA and protein reference sequences and their relation to single nucleotide variants in the human population. Database J. Biol. Databases Curation 2016 (2016) - Jiaxin Wu, Mengmeng Wu, Lianshuo Li, Zhuo Liu, Wanwen Zeng, Rui Jiang:
dbWGFP: a database and web server of human whole-genome single nucleotide variants and their functional predictions. Database J. Biol. Databases Curation 2016 (2016) - Guy Cochrane, Ilene Karsch-Mizrachi, Toshihisa Takagi:
The International Nucleotide Sequence Database Collaboration. Nucleic Acids Res. 44(Database-Issue): 48-50 (2016) - Richard Gibson, Blaise T. F. Alako, Clara Amid, Ana Cerdeño-Tárraga, Iain Cleland, Neil Goodgame, Petra ten Hoopen, Suran Jayathilaka, Simon Kay, Rasko Leinonen, Xin Liu, Swapna Pallreddy, Nima Pakseresht, Jeena Rajan, Marc Rossello, Nicole Silvester, Dimitriy Smirnov, Ana Luisa Toribio, Daniel Vaughan, Vadim Zalunin, Guy Cochrane:
Biocuration of functional annotation at the European nucleotide archive. Nucleic Acids Res. 44(Database-Issue): 58-66 (2016) - Zejun Zheng, Alexander Goncearenco, Igor N. Berezovsky:
Nucleotide binding database NBDB - a collection of sequence motifs with specific protein-ligand interactions. Nucleic Acids Res. 44(Database-Issue): 301-307 (2016) - 2015
- Nicole Silvester, Blaise T. F. Alako, Clara Amid, Ana Cerdeño-Tárraga, Iain Cleland, Richard Gibson, Neil Goodgame, Petra ten Hoopen, Simon Kay, Rasko Leinonen, Weizhong Li, Xin Liu, Rodrigo Lopez, Nima Pakseresht, Swapna Pallreddy, Sheila Plaister, Rajesh Radhakrishnan, Marc Rossello, Alexander Senf, Dimitriy Smirnov, Ana Luisa Toribio, Daniel Vaughan, Vadim Zalunin, Guy Cochrane:
Content discovery and retrieval services at the European Nucleotide Archive. Nucleic Acids Res. 43(Database-Issue): 23-29 (2015) - 2014
- Nima Pakseresht, Blaise T. F. Alako, Clara Amid, Ana Cerdeño-Tárraga, Iain Cleland, Richard Gibson, Neil Goodgame, Tamer Gur, Mikyung Jang, Simon Kay, Rasko Leinonen, Weizhong Li, Xin Liu, Rodrigo Lopez, Hamish McWilliam, Arnaud Oisel, Swapna Pallreddy, Sheila Plaister, Rajesh Radhakrishnan, Stéphane Rivière, Marc Rossello, Alexander Senf, Nicole Silvester, Dimitriy Smirnov, Silvano Squizzato, Petra ten Hoopen, Ana Luisa Toribio, Daniel Vaughan, Vadim Zalunin, Guy Cochrane:
Assembly information services in the European Nucleotide Archive. Nucleic Acids Res. 42(Database-Issue): 38-43 (2014) - 2013
- Guy Cochrane, Blaise T. F. Alako, Clara Amid, Lawrence Bower, Ana Cerdeño-Tárraga, Iain Cleland, Richard Gibson, Neil Goodgame, Mikyung Jang, Simon Kay, Rasko Leinonen, Xiu Lin, Rodrigo Lopez, Hamish McWilliam, Arnaud Oisel, Nima Pakseresht, Swapna Pallreddy, Young Mi Park, Sheila Plaister, Rajesh Radhakrishnan, Stéphane Rivière, Marc Rossello, Alexander Senf, Nicole Silvester, Dimitriy Smirnov, Petra ten Hoopen, Ana Luisa Toribio, Daniel Vaughan, Vadim Zalunin:
Facing growth in the European Nucleotide Archive. Nucleic Acids Res. 41(Database-Issue): 30-35 (2013) - Yasukazu Nakamura, Guy Cochrane, Ilene Karsch-Mizrachi:
The International Nucleotide Sequence Database Collaboration. Nucleic Acids Res. 41(Database-Issue): 21-24 (2013) - 2012
- Ambarish Nag, Tatiana V. Karpinets, Christopher H. Chang, Maor Bar-Peled:
Enhancing a Pathway-Genome Database (PGDB) to capture subcellular localization of metabolites and enzymes: the nucleotide-sugar biosynthetic pathways of Populus trichocarpa. Database J. Biol. Databases Curation 2012 (2012) - Clara Amid, Ewan Birney, Lawrence Bower, Ana Cerdeño-Tárraga, Ying Cheng, Iain Cleland, Nadeem Faruque, Richard Gibson, Neil Goodgame, Christopher I. Hunter, Mikyung Jang, Rasko Leinonen, Xin Liu, Arnaud Oisel, Nima Pakseresht, Sheila Plaister, Rajesh Radhakrishnan, Kethi Reddy, Stéphane Rivière, Marc Rossello, Alexander Senf, Dimitriy Smirnov, Petra ten Hoopen, Daniel Vaughan, Robert Vaughan, Vadim Zalunin, Guy Cochrane:
Major submissions tool developments at the European nucleotide archive. Nucleic Acids Res. 40(Database-Issue): 43-47 (2012) - Ilene Karsch-Mizrachi, Yasukazu Nakamura, Guy Cochrane:
The International Nucleotide Sequence Database Collaboration. Nucleic Acids Res. 40(Database-Issue): 33-37 (2012) - 2011
- Philippe E. Thomas, Roman Klinger, Laura Inés Furlong, Martin Hofmann-Apitius, Christoph M. Friedrich:
Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers. BMC Bioinform. 12(S-4): S4 (2011) - Guy Cochrane, Ilene Karsch-Mizrachi, Yasukazu Nakamura:
The International Nucleotide Sequence Database Collaboration. Nucleic Acids Res. 39(Database-Issue): 15-18 (2011) - Meng-Ru Ho, Kuo-Wang Tsai, Chun-Houh Chen, Wen-Chang Lin:
dbDNV: a resource of duplicated gene nucleotide variants in human genome. Nucleic Acids Res. 39(Database-Issue): 920-925 (2011) - Rasko Leinonen, Ruth Akhtar, Ewan Birney, Lawrence Bower, Ana Cerdeño-Tárraga, Ying Cheng, Iain Cleland, Nadeem Faruque, Neil Goodgame, Richard Gibson, Gemma Hoad, Mikyung Jang, Nima Pakseresht, Sheila Plaister, Rajesh Radhakrishnan, Kethi Reddy, Siamak Sobhany, Petra ten Hoopen, Robert Vaughan, Vadim Zalunin, Guy Cochrane:
The European Nucleotide Archive. Nucleic Acids Res. 39(Database-Issue): 28-31 (2011)
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