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Publications
- 2024
[j72]Tao Wang, Han Shu, Jialu Hu
, Yongtian Wang, Jin Chen, Jiajie Peng, Xuequn Shang:
Accurately deciphering spatial domains for spatially resolved transcriptomics with stCluster. Briefings Bioinform. 25(4) (2024)- [j71]Haohui Zhang, Yuwei Wang, Bin Lian, Yiran Wang, Xingyi Li, Tao Wang, Xuequn Shang, Hui Yang, Ahmad Aziz, Jialu Hu:
Scbean: a python library for single-cell multi-omics data analysis. Bioinform. 40(2) (2024) - 2023
- [j60]Yuwei Wang, Bin Lian, Haohui Zhang, Yuanke Zhong, Jie He, Fashuai Wu, Knut Reinert, Xuequn Shang, Hui Yang, Jialu Hu:
A multi-view latent variable model reveals cellular heterogeneity in complex tissues for paired multimodal single-cell data. Bioinform. 39(1) (2023) - 2022
- [j49]Jialu Hu, Yuanke Zhong, Xuequn Shang:
A versatile and scalable single-cell data integration algorithm based on domain-adversarial and variational approximation. Briefings Bioinform. 23(1) (2022) - [c65]Xingyi Li, Zhelin Zhao, Ju Xiang, Jialu Hu, Xuequn Shang:
A multi-source fusion method to identify biomarkers for breast cancer prognosis based on dual-layer heterogeneous network. BIBM 2022: 471-476 - 2021
- [j37]Yan Zheng, Yuanke Zhong, Jialu Hu, Xuequn Shang:
SCC: an accurate imputation method for scRNA-seq dropouts based on a mixture model. BMC Bioinform. 22(1): 5 (2021) - 2020
- [j31]Yuanke Zhong, Jing Li, Junhao He, Yiqun Gao, Jie Liu, Jingru Wang, Xuequn Shang, Jialu Hu:
Twadn: an efficient alignment algorithm based on time warping for pairwise dynamic networks. BMC Bioinform. 21-S(13): 385 (2020) - 2019
- [j24]Jialu Hu, Jingru Wang, Jianan Lin, Tianwei Liu, Yuanke Zhong, Jie Liu, Yan Zheng, Yiqun Gao, Junhao He, Xuequn Shang:
MD-SVM: a novel SVM-based algorithm for the motif discovery of transcription factor binding sites. BMC Bioinform. 20-S(7): 41-48 (2019) - [j21]Jialu Hu, Yiqun Gao, Jing Li, Yan Zheng, Jingru Wang, Xuequn Shang:
A novel algorithm based on bi-random walks to identify disease-related lncRNAs. BMC Bioinform. 20-S(18): 569:1-569:11 (2019) - [c38]Yuanke Zhong, Jing Li, Jie Liu, Yan Zheng, Xuequn Shang, Jialu Hu:
Deep learning enables accurate alignment of single cell RNA-seq data. BIBM 2019: 778-781 - 2018
- [j16]Jialu Hu, Yiqun Gao, Junhao He, Yan Zheng, Xuequn Shang:
WebNetCoffee: a web-based application to identify functionally conserved proteins from Multiple PPI networks. BMC Bioinform. 19(1): 422:1-422:6 (2018) - [j13]Jialu Hu, Yiqun Gao, Yan Zheng, Xuequn Shang:
KF-finder: identification of key factors from host-microbial networks in cervical cancer. BMC Syst. Biol. 12(4): 41-48 (2018) - [c29]Yiqun Gao, Jialu Hu, Xuequn Shang:
Identification of lncRNA-disease association using bi-random walks. BIBM 2018: 1249-1255 - [c27]Jialu Hu, Junhao He, Yiqun Gao, Yan Zheng, Xuequn Shang:
NetCoffee2: A Novel Global Alignment Algorithm for Multiple PPI Networks Based on Graph Feature Vectors. ICIC (2) 2018: 241-246 - 2017
- [c24]Jialu Hu, Yan Zheng, Xuequn Shang:
MiteFinder: A fast approach to identify miniature inverted-repeat transposable elements on a genome-wide scale. BIBM 2017: 164-168 - 2016
- [c18]Jiajie Peng, Qianqian Li, Bolin Chen, Jialu Hu, Xuequn Shang:
Analyzing factors involved in the HPO-based semantic similarity calculation. BIBM 2016: 1653-1656
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last updated on 2024-09-13 01:42 CEST by the dblp team
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