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Books and Theses
- 2009
[b1]Timothy F. Oliver:
Wire level encapsulation framework for increasing FPGA design productivity. Nanyang Technological University, Singapore, 2009
Journal Articles
- 2009
- [j7]Timothy F. Oliver, Bertil Schmidt
, Yanto Jakop, Douglas L. Maskell:
High Speed Biological Sequence Analysis With Hidden Markov Models on Reconfigurable Platforms. IEEE Trans. Inf. Technol. Biomed. 13(5): 740-746 (2009) - 2008
- [j6]Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt:
Integrating FPGA acceleration into HMMer. Parallel Comput. 34(11): 681-691 (2008) - 2007
- [j5]Timothy F. Oliver, Douglas L. Maskell:
Prerouted FPGA Cores for Rapid System Construction in a Dynamic Reconfigurable System. EURASIP J. Embed. Syst. 2007 (2007) - [j4]John Paul Walters, Xiandong Meng, Vipin Chaudhary, Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt, Darran Nathan, Joseph I. Landman:
MPI-HMMER-Boost: Distributed FPGA Acceleration. J. VLSI Signal Process. 48(3): 223-238 (2007) - 2006
- [j3]Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell, Darran Nathan, Ralf Clemens:
High-speed Multiple Sequence Alignment on a reconfigurable platform. Int. J. Bioinform. Res. Appl. 2(4): 394-406 (2006) - 2005
- [j2]Timothy F. Oliver, Bertil Schmidt, Darran Nathan, Ralf Clemens, Douglas L. Maskell:
Using reconfigurable hardware to accelerate multiple sequence alignment with ClustalW. Bioinform. 21(16): 3431-3432 (2005) - [j1]Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell:
Reconfigurable architectures for bio-sequence database scanning on FPGAs. IEEE Trans. Circuits Syst. II Express Briefs 52-II(12): 851-855 (2005)
Conference and Workshop Papers
- 2007
- [c11]Timothy F. Oliver, Leow Yuan Yeow, Bertil Schmidt:
High Performance Database Searching with HMMer on FPGAs. IPDPS 2007: 1-7 - [c10]Yan Lin Aung, Douglas L. Maskell, Timothy F. Oliver, Bertil Schmidt, William Bong:
C-Based Design Methodology for FPGA Implementation of ClustalW MSA. PRIB 2007: 11-18 - 2006
- [c9]Timothy F. Oliver, Douglas L. Maskell:
Execution Objects for Dynamically Reconfigurable FPGA Systems. FPL 2006: 1-4 - [c8]Timothy F. Oliver, Bertil Schmidt, Yanto Jakop, Douglas L. Maskell:
Accelerating the Viterbi Algorithm for Profile Hidden Markov Models Using Reconfigurable Hardware. International Conference on Computational Science (1) 2006: 522-529 - 2005
- [c7]Jacop Yanto, Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell:
Biological Sequence Analysis with Hidden Markov Models on an FPGA. Asia-Pacific Computer Systems Architecture Conference 2005: 429-439 - [c6]Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell:
Hyper customized processors for bio-sequence database scanning on FPGAs. FPGA 2005: 229-237 - [c5]Timothy F. Oliver, Douglas L. Maskell:
An FPGA Model for Developing Dynamic Circuit Computing. FPT 2005: 281-282 - [c4]Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell, Darran Nathan, Ralf Clemens:
Multiple Sequence Alignment on an FPGA. ICPADS (2) 2005: 326-330 - [c3]Timothy F. Oliver, Bertil Schmidt, Douglas L. Maskell, Achutavarrier Prasad Vinod:
A reconfigurable architecture for scanning biosequence databases. ISCAS (5) 2005: 4799-4802 - 2004
- [c2]Timothy F. Oliver, Bertil Schmidt:
High Performance Biosequence Database Scanning on Reconfigurable Platforms. IPDPS 2004 - 2003
- [c1]Timothy F. Oliver, Douglas L. Maskell:
Towards Run-Time Re-Configurable Techniques for Real-Time Embedded Applications. Engineering of Reconfigurable Systems and Algorithms 2003: 141-146
Informal and Other Publications
- 2006
- [i1]Douglas L. Maskell, Timothy F. Oliver:
Pre-Routed FPGA Cores for Rapid System Construction in a Dynamic Reconfigurable System. Dynamically Reconfigurable Architectures 2006
Coauthor Index
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