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ORCIDBibTeX records: Fabio Vandin
@article{DBLP:journals/pvldb/PellegrinaV24,
author = {Leonardo Pellegrina and
Fabio Vandin},
title = {Efficient Discovery of Significant Patterns with Few-Shot Resampling},
journal = {Proc. {VLDB} Endow.},
volume = {17},
number = {10},
pages = {2668--2680},
year = {2024},
url = {https://www.vldb.org/pvldb/vol17/p2668-vandin.pdf},
timestamp = {Thu, 19 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pvldb/PellegrinaV24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkdd/PellegrinaV24,
author = {Leonardo Pellegrina and
Fabio Vandin},
title = {{SILVAN:} Estimating Betweenness Centralities with Progressive Sampling
and Non-uniform Rademacher Bounds},
journal = {{ACM} Trans. Knowl. Discov. Data},
volume = {18},
number = {3},
pages = {52:1--52:55},
year = {2024},
url = {https://doi.org/10.1145/3628601},
doi = {10.1145/3628601},
timestamp = {Sat, 10 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tkdd/PellegrinaV24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/PellegrinaV24,
author = {Leonardo Pellegrina and
Fabio Vandin},
editor = {Ricardo Baeza{-}Yates and
Francesco Bonchi},
title = {Scalable Rule Lists Learning with Sampling},
booktitle = {Proceedings of the 30th {ACM} {SIGKDD} Conference on Knowledge Discovery
and Data Mining, {KDD} 2024, Barcelona, Spain, August 25-29, 2024},
pages = {2352--2363},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3637528.3671989},
doi = {10.1145/3637528.3671989},
timestamp = {Sun, 08 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kdd/PellegrinaV24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/SarpeVG24,
author = {Ilie Sarpe and
Fabio Vandin and
Aristides Gionis},
editor = {Ricardo Baeza{-}Yates and
Francesco Bonchi},
title = {Scalable Temporal Motif Densest Subnetwork Discovery},
booktitle = {Proceedings of the 30th {ACM} {SIGKDD} Conference on Knowledge Discovery
and Data Mining, {KDD} 2024, Barcelona, Spain, August 25-29, 2024},
pages = {2536--2547},
publisher = {{ACM}},
year = {2024},
url = {https://doi.org/10.1145/3637528.3671889},
doi = {10.1145/3637528.3671889},
timestamp = {Sun, 08 Sep 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kdd/SarpeVG24.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2406-10608,
author = {Ilie Sarpe and
Fabio Vandin and
Aristides Gionis},
title = {Scalable Temporal Motif Densest Subnetwork Discovery},
journal = {CoRR},
volume = {abs/2406.10608},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2406.10608},
doi = {10.48550/ARXIV.2406.10608},
eprinttype = {arXiv},
eprint = {2406.10608},
timestamp = {Thu, 18 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2406-10608.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2406-11803,
author = {Leonardo Pellegrina and
Fabio Vandin},
title = {Efficient Discovery of Significant Patterns with Few-Shot Resampling},
journal = {CoRR},
volume = {abs/2406.11803},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2406.11803},
doi = {10.48550/ARXIV.2406.11803},
eprinttype = {arXiv},
eprint = {2406.11803},
timestamp = {Thu, 18 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2406-11803.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2406-12803,
author = {Leonardo Pellegrina and
Fabio Vandin},
title = {Scalable Rule Lists Learning with Sampling},
journal = {CoRR},
volume = {abs/2406.12803},
year = {2024},
url = {https://doi.org/10.48550/arXiv.2406.12803},
doi = {10.48550/ARXIV.2406.12803},
eprinttype = {arXiv},
eprint = {2406.12803},
timestamp = {Fri, 12 Jul 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2406-12803.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kais/TononV23,
author = {Andrea Tonon and
Fabio Vandin},
title = {caSPiTa: mining statistically significant paths in time series data
from an unknown network},
journal = {Knowl. Inf. Syst.},
volume = {65},
number = {6},
pages = {2347--2374},
year = {2023},
url = {https://doi.org/10.1007/s10115-022-01800-7},
doi = {10.1007/S10115-022-01800-7},
timestamp = {Sat, 13 May 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/kais/TononV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icde/PellizzoniV23,
author = {Paolo Pellizzoni and
Fabio Vandin},
title = {VC-dimension and Rademacher Averages of Subgraphs, with Applications
to Graph Mining},
booktitle = {39th {IEEE} International Conference on Data Engineering, {ICDE} 2023,
Anaheim, CA, USA, April 3-7, 2023},
pages = {2470--2482},
publisher = {{IEEE}},
year = {2023},
url = {https://doi.org/10.1109/ICDE55515.2023.00190},
doi = {10.1109/ICDE55515.2023.00190},
timestamp = {Thu, 27 Jul 2023 14:59:05 +0200},
biburl = {https://dblp.org/rec/conf/icde/PellizzoniV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcai/SimionatoV23,
author = {Dario Simionato and
Fabio Vandin},
title = {Bounding the Family-Wise Error Rate in Local Causal Discovery Using
Rademacher Averages (Extended Abstract)},
booktitle = {Proceedings of the Thirty-Second International Joint Conference on
Artificial Intelligence, {IJCAI} 2023, 19th-25th August 2023, Macao,
SAR, China},
pages = {6492--6497},
publisher = {ijcai.org},
year = {2023},
url = {https://doi.org/10.24963/ijcai.2023/726},
doi = {10.24963/IJCAI.2023/726},
timestamp = {Mon, 28 Aug 2023 17:23:07 +0200},
biburl = {https://dblp.org/rec/conf/ijcai/SimionatoV23.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/SantoroPCV22,
author = {Diego Santoro and
Leonardo Pellegrina and
Matteo Comin and
Fabio Vandin},
title = {{SPRISS:} approximating frequent \emph{k}-mers by sampling reads,
and applications},
journal = {Bioinform.},
volume = {38},
number = {13},
pages = {3343--3350},
year = {2022},
url = {https://doi.org/10.1093/bioinformatics/btac180},
doi = {10.1093/BIOINFORMATICS/BTAC180},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bioinformatics/SantoroPCV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/cacm/Vandin22,
author = {Fabio Vandin},
title = {Technical perspective: Evaluating sampled metrics is challenging},
journal = {Commun. {ACM}},
volume = {65},
number = {7},
pages = {74},
year = {2022},
url = {https://doi.org/10.1145/3535334},
doi = {10.1145/3535334},
timestamp = {Thu, 30 Jun 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/cacm/Vandin22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/data/BuffelliV22,
author = {Davide Buffelli and
Fabio Vandin},
title = {The Impact of Global Structural Information in Graph Neural Networks
Applications},
journal = {Data},
volume = {7},
number = {1},
pages = {10},
year = {2022},
url = {https://doi.org/10.3390/data7010010},
doi = {10.3390/DATA7010010},
timestamp = {Tue, 15 Mar 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/data/BuffelliV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/kais/TononV22,
author = {Andrea Tonon and
Fabio Vandin},
title = {gRosSo: mining statistically robust patterns from a sequence of datasets},
journal = {Knowl. Inf. Syst.},
volume = {64},
number = {9},
pages = {2329--2359},
year = {2022},
url = {https://doi.org/10.1007/s10115-022-01689-2},
doi = {10.1007/S10115-022-01689-2},
timestamp = {Mon, 24 Oct 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/kais/TononV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkdd/PellegrinaCVR22,
author = {Leonardo Pellegrina and
Cyrus Cousins and
Fabio Vandin and
Matteo Riondato},
title = {MCRapper: Monte-Carlo Rademacher Averages for Poset Families and Approximate
Pattern Mining},
journal = {{ACM} Trans. Knowl. Discov. Data},
volume = {16},
number = {6},
pages = {124:1--124:29},
year = {2022},
url = {https://doi.org/10.1145/3532187},
doi = {10.1145/3532187},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/tkdd/PellegrinaCVR22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/ijcnn/BuffelliV22,
author = {Davide Buffelli and
Fabio Vandin},
title = {Graph Representation Learning for Multi-Task Settings: a Meta-Learning
Approach},
booktitle = {International Joint Conference on Neural Networks, {IJCNN} 2022, Padua,
Italy, July 18-23, 2022},
pages = {1--8},
publisher = {{IEEE}},
year = {2022},
url = {https://doi.org/10.1109/IJCNN55064.2022.9892010},
doi = {10.1109/IJCNN55064.2022.9892010},
timestamp = {Wed, 07 Dec 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/ijcnn/BuffelliV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/nips/BuffelliLV22,
author = {Davide Buffelli and
Pietro Li{\'{o}} and
Fabio Vandin},
editor = {Sanmi Koyejo and
S. Mohamed and
A. Agarwal and
Danielle Belgrave and
K. Cho and
A. Oh},
title = {SizeShiftReg: a Regularization Method for Improving Size-Generalization
in Graph Neural Networks},
booktitle = {Advances in Neural Information Processing Systems 35: Annual Conference
on Neural Information Processing Systems 2022, NeurIPS 2022, New Orleans,
LA, USA, November 28 - December 9, 2022},
year = {2022},
url = {http://papers.nips.cc/paper\_files/paper/2022/hash/ceeb3fa5be458f08fbb12a5bb783aac8-Abstract-Conference.html},
timestamp = {Mon, 08 Jan 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/nips/BuffelliLV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pkdd/SimionatoV22,
author = {Dario Simionato and
Fabio Vandin},
editor = {Massih{-}Reza Amini and
St{\'{e}}phane Canu and
Asja Fischer and
Tias Guns and
Petra Kralj Novak and
Grigorios Tsoumakas},
title = {Bounding the Family-Wise Error Rate in Local Causal Discovery Using
Rademacher Averages},
booktitle = {Machine Learning and Knowledge Discovery in Databases - European Conference,
{ECML} {PKDD} 2022, Grenoble, France, September 19-23, 2022, Proceedings,
Part {V}},
series = {Lecture Notes in Computer Science},
volume = {13717},
pages = {255--271},
publisher = {Springer},
year = {2022},
url = {https://doi.org/10.1007/978-3-031-26419-1\_16},
doi = {10.1007/978-3-031-26419-1\_16},
timestamp = {Tue, 28 Mar 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/pkdd/SimionatoV22.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2201-03326,
author = {Davide Buffelli and
Fabio Vandin},
title = {Graph Representation Learning for Multi-Task Settings: a Meta-Learning
Approach},
journal = {CoRR},
volume = {abs/2201.03326},
year = {2022},
url = {https://arxiv.org/abs/2201.03326},
eprinttype = {arXiv},
eprint = {2201.03326},
timestamp = {Thu, 20 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2201-03326.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2207-07888,
author = {Davide Buffelli and
Pietro Li{\`{o}} and
Fabio Vandin},
title = {SizeShiftReg: a Regularization Method for Improving Size-Generalization
in Graph Neural Networks},
journal = {CoRR},
volume = {abs/2207.07888},
year = {2022},
url = {https://doi.org/10.48550/arXiv.2207.07888},
doi = {10.48550/ARXIV.2207.07888},
eprinttype = {arXiv},
eprint = {2207.07888},
timestamp = {Tue, 19 Jul 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2207-07888.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bib/CominCPV21,
author = {Matteo Comin and
Barbara Di Camillo and
Cinzia Pizzi and
Fabio Vandin},
title = {Comparison of microbiome samples: methods and computational challenges},
journal = {Briefings Bioinform.},
volume = {22},
number = {1},
pages = {88--95},
year = {2021},
url = {https://doi.org/10.1093/bib/bbaa121},
doi = {10.1093/BIB/BBAA121},
timestamp = {Tue, 07 May 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bib/CominCPV21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/cikm/SarpeV21,
author = {Ilie Sarpe and
Fabio Vandin},
editor = {Gianluca Demartini and
Guido Zuccon and
J. Shane Culpepper and
Zi Huang and
Hanghang Tong},
title = {odeN: Simultaneous Approximation of Multiple Motif Counts in Large
Temporal Networks},
booktitle = {{CIKM} '21: The 30th {ACM} International Conference on Information
and Knowledge Management, Virtual Event, Queensland, Australia, November
1 - 5, 2021},
pages = {1568--1577},
publisher = {{ACM}},
year = {2021},
url = {https://doi.org/10.1145/3459637.3482459},
doi = {10.1145/3459637.3482459},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/cikm/SarpeV21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/TononV21,
author = {Andrea Tonon and
Fabio Vandin},
editor = {James Bailey and
Pauli Miettinen and
Yun Sing Koh and
Dacheng Tao and
Xindong Wu},
title = {{CASPITA:} Mining Statistically Significant Paths in Time Series Data
from an Unknown Network},
booktitle = {{IEEE} International Conference on Data Mining, {ICDM} 2021, Auckland,
New Zealand, December 7-10, 2021},
pages = {639--648},
publisher = {{IEEE}},
year = {2021},
url = {https://doi.org/10.1109/ICDM51629.2021.00075},
doi = {10.1109/ICDM51629.2021.00075},
timestamp = {Mon, 31 Jan 2022 08:58:55 +0100},
biburl = {https://dblp.org/rec/conf/icdm/TononV21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/SarpeV21,
author = {Ilie Sarpe and
Fabio Vandin},
editor = {Carlotta Demeniconi and
Ian Davidson},
title = {{PRESTO:} Simple and Scalable Sampling Techniques for the Rigorous
Approximation of Temporal Motif Counts},
booktitle = {Proceedings of the 2021 {SIAM} International Conference on Data Mining,
{SDM} 2021, Virtual Event, April 29 - May 1, 2021},
pages = {145--153},
publisher = {{SIAM}},
year = {2021},
url = {https://doi.org/10.1137/1.9781611976700.17},
doi = {10.1137/1.9781611976700.17},
timestamp = {Sun, 04 Aug 2024 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sdm/SarpeV21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/AltieriPPV21,
author = {Federico Altieri and
Andrea Pietracaprina and
Geppino Pucci and
Fabio Vandin},
editor = {Carlotta Demeniconi and
Ian Davidson},
title = {Scalable Distributed Approximation of Internal Measures for Clustering
Evaluation},
booktitle = {Proceedings of the 2021 {SIAM} International Conference on Data Mining,
{SDM} 2021, Virtual Event, April 29 - May 1, 2021},
pages = {648--656},
publisher = {{SIAM}},
year = {2021},
url = {https://doi.org/10.1137/1.9781611976700.73},
doi = {10.1137/1.9781611976700.73},
timestamp = {Sat, 21 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/sdm/AltieriPPV21.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2101-07152,
author = {Ilie Sarpe and
Fabio Vandin},
title = {{PRESTO:} Simple and Scalable Sampling Techniques for the Rigorous
Approximation of Temporal Motif Counts},
journal = {CoRR},
volume = {abs/2101.07152},
year = {2021},
url = {https://arxiv.org/abs/2101.07152},
eprinttype = {arXiv},
eprint = {2101.07152},
timestamp = {Fri, 22 Jan 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2101-07152.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2106-03462,
author = {Leonardo Pellegrina and
Fabio Vandin},
title = {{SILVAN:} Estimating Betweenness Centralities with Progressive Sampling
and Non-uniform Rademacher Bounds},
journal = {CoRR},
volume = {abs/2106.03462},
year = {2021},
url = {https://arxiv.org/abs/2106.03462},
eprinttype = {arXiv},
eprint = {2106.03462},
timestamp = {Thu, 10 Jun 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2106-03462.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2108-08734,
author = {Ilie Sarpe and
Fabio Vandin},
title = {odeN: Simultaneous Approximation of Multiple Motif Counts in Large
Temporal Networks},
journal = {CoRR},
volume = {abs/2108.08734},
year = {2021},
url = {https://arxiv.org/abs/2108.08734},
eprinttype = {arXiv},
eprint = {2108.08734},
timestamp = {Mon, 23 Aug 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2108-08734.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/algorithms/SantoroTV20,
author = {Diego Santoro and
Andrea Tonon and
Fabio Vandin},
title = {Mining Sequential Patterns with VC-Dimension and Rademacher Complexity},
journal = {Algorithms},
volume = {13},
number = {5},
pages = {123},
year = {2020},
url = {https://doi.org/10.3390/a13050123},
doi = {10.3390/A13050123},
timestamp = {Tue, 16 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/algorithms/SantoroTV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/PellegrinaV20,
author = {Leonardo Pellegrina and
Fabio Vandin},
title = {Efficient mining of the most significant patterns with permutation
testing},
journal = {Data Min. Knowl. Discov.},
volume = {34},
number = {4},
pages = {1201--1234},
year = {2020},
url = {https://doi.org/10.1007/s10618-020-00687-8},
doi = {10.1007/S10618-020-00687-8},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/datamine/PellegrinaV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/PellegrinaPV20,
author = {Leonardo Pellegrina and
Cinzia Pizzi and
Fabio Vandin},
title = {Fast Approximation of Frequent k-Mers and Applications to Metagenomics},
journal = {J. Comput. Biol.},
volume = {27},
number = {4},
pages = {534--549},
year = {2020},
url = {https://doi.org/10.1089/cmb.2019.0314},
doi = {10.1089/CMB.2019.0314},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/PellegrinaPV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/tkdd/RiondatoV20,
author = {Matteo Riondato and
Fabio Vandin},
title = {MiSoSouP: Mining Interesting Subgroups with Sampling and Pseudodimension},
journal = {{ACM} Trans. Knowl. Discov. Data},
volume = {14},
number = {5},
pages = {56:1--56:31},
year = {2020},
url = {https://doi.org/10.1145/3385653},
doi = {10.1145/3385653},
timestamp = {Mon, 03 Jan 2022 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/tkdd/RiondatoV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/TononV20,
author = {Andrea Tonon and
Fabio Vandin},
editor = {Claudia Plant and
Haixun Wang and
Alfredo Cuzzocrea and
Carlo Zaniolo and
Xindong Wu},
title = {GRosSo: Mining Statistically Robust Patterns from a Sequence of Datasets},
booktitle = {20th {IEEE} International Conference on Data Mining, {ICDM} 2020,
Sorrento, Italy, November 17-20, 2020},
pages = {551--560},
publisher = {{IEEE}},
year = {2020},
url = {https://doi.org/10.1109/ICDM50108.2020.00064},
doi = {10.1109/ICDM50108.2020.00064},
timestamp = {Wed, 17 Feb 2021 11:24:17 +0100},
biburl = {https://dblp.org/rec/conf/icdm/TononV20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/PellegrinaCVR20,
author = {Leonardo Pellegrina and
Cyrus Cousins and
Fabio Vandin and
Matteo Riondato},
editor = {Rajesh Gupta and
Yan Liu and
Jiliang Tang and
B. Aditya Prakash},
title = {MCRapper: Monte-Carlo Rademacher Averages for Poset Families and Approximate
Pattern Mining},
booktitle = {{KDD} '20: The 26th {ACM} {SIGKDD} Conference on Knowledge Discovery
and Data Mining, Virtual Event, CA, USA, August 23-27, 2020},
pages = {2165--2174},
publisher = {{ACM}},
year = {2020},
url = {https://doi.org/10.1145/3394486.3403267},
doi = {10.1145/3394486.3403267},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kdd/PellegrinaCVR20.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2003-01430,
author = {Federico Altieri and
Andrea Pietracaprina and
Geppino Pucci and
Fabio Vandin},
title = {Scalable Distributed Approximation of Internal Measures for Clustering
Evaluation},
journal = {CoRR},
volume = {abs/2003.01430},
year = {2020},
url = {https://arxiv.org/abs/2003.01430},
eprinttype = {arXiv},
eprint = {2003.01430},
timestamp = {Tue, 10 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/corr/abs-2003-01430.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2006-03814,
author = {Davide Buffelli and
Fabio Vandin},
title = {Are Graph Convolutional Networks Fully Exploiting Graph Structure?},
journal = {CoRR},
volume = {abs/2006.03814},
year = {2020},
url = {https://arxiv.org/abs/2006.03814},
eprinttype = {arXiv},
eprint = {2006.03814},
timestamp = {Fri, 12 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2006-03814.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2006-03820,
author = {Davide Buffelli and
Fabio Vandin},
title = {Attention-Based Deep Learning Framework for Human Activity Recognition
with User Adaptation},
journal = {CoRR},
volume = {abs/2006.03820},
year = {2020},
url = {https://arxiv.org/abs/2006.03820},
eprinttype = {arXiv},
eprint = {2006.03820},
timestamp = {Fri, 12 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2006-03820.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2006-09085,
author = {Leonardo Pellegrina and
Cyrus Cousins and
Fabio Vandin and
Matteo Riondato},
title = {MCRapper: Monte-Carlo Rademacher Averages for Poset Families and Approximate
Pattern Mining},
journal = {CoRR},
volume = {abs/2006.09085},
year = {2020},
url = {https://arxiv.org/abs/2006.09085},
eprinttype = {arXiv},
eprint = {2006.09085},
timestamp = {Wed, 17 Jun 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2006-09085.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-2012-06755,
author = {Davide Buffelli and
Fabio Vandin},
title = {A Meta-Learning Approach for Graph Representation Learning in Multi-Task
Settings},
journal = {CoRR},
volume = {abs/2012.06755},
year = {2020},
url = {https://arxiv.org/abs/2012.06755},
eprinttype = {arXiv},
eprint = {2012.06755},
timestamp = {Thu, 14 Oct 2021 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-2012-06755.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/HajkarimUV19,
author = {Morteza Chalabi Hajkarim and
Eli Upfal and
Fabio Vandin},
title = {Differentially mutated subnetworks discovery},
journal = {Algorithms Mol. Biol.},
volume = {14},
number = {1},
pages = {10:1--10:11},
year = {2019},
url = {https://doi.org/10.1186/s13015-019-0146-7},
doi = {10.1186/S13015-019-0146-7},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/HajkarimUV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bmcbi/HajkarimTKVS19,
author = {Morteza Chalabi Hajkarim and
Vasileios Tsiamis and
Lukas K{\"{a}}ll and
Fabio Vandin and
Veit Schw{\"{a}}mmle},
title = {CoExpresso: assess the quantitative behavior of protein complexes
in human cells},
journal = {{BMC} Bioinform.},
volume = {20},
number = {1},
pages = {17},
year = {2019},
url = {https://doi.org/10.1186/s12859-018-2573-8},
doi = {10.1186/S12859-018-2573-8},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/bmcbi/HajkarimTKVS19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/BassoHV19,
author = {Rebecca Sarto Basso and
Dorit S. Hochbaum and
Fabio Vandin},
title = {Efficient algorithms to discover alterations with complementary functional
association in cancer},
journal = {PLoS Comput. Biol.},
volume = {15},
number = {5},
year = {2019},
url = {https://doi.org/10.1371/journal.pcbi.1006802},
doi = {10.1371/JOURNAL.PCBI.1006802},
timestamp = {Sat, 25 Dec 2021 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/ploscb/BassoHV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/icdm/TononV19,
author = {Andrea Tonon and
Fabio Vandin},
editor = {Jianyong Wang and
Kyuseok Shim and
Xindong Wu},
title = {Permutation Strategies for Mining Significant Sequential Patterns},
booktitle = {2019 {IEEE} International Conference on Data Mining, {ICDM} 2019,
Beijing, China, November 8-11, 2019},
pages = {1330--1335},
publisher = {{IEEE}},
year = {2019},
url = {https://doi.org/10.1109/ICDM.2019.00169},
doi = {10.1109/ICDM.2019.00169},
timestamp = {Tue, 26 Jan 2021 13:51:21 +0100},
biburl = {https://dblp.org/rec/conf/icdm/TononV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/PellegrinaRV19,
author = {Leonardo Pellegrina and
Matteo Riondato and
Fabio Vandin},
editor = {Ankur Teredesai and
Vipin Kumar and
Ying Li and
R{\'{o}}mer Rosales and
Evimaria Terzi and
George Karypis},
title = {SPuManTE: Significant Pattern Mining with Unconditional Testing},
booktitle = {Proceedings of the 25th {ACM} {SIGKDD} International Conference on
Knowledge Discovery {\&} Data Mining, {KDD} 2019, Anchorage, AK,
USA, August 4-8, 2019},
pages = {1528--1538},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3292500.3330978},
doi = {10.1145/3292500.3330978},
timestamp = {Tue, 20 Aug 2024 07:54:44 +0200},
biburl = {https://dblp.org/rec/conf/kdd/PellegrinaRV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/PellegrinaRV19a,
author = {Leonardo Pellegrina and
Matteo Riondato and
Fabio Vandin},
editor = {Ankur Teredesai and
Vipin Kumar and
Ying Li and
R{\'{o}}mer Rosales and
Evimaria Terzi and
George Karypis},
title = {Hypothesis Testing and Statistically-sound Pattern Mining},
booktitle = {Proceedings of the 25th {ACM} {SIGKDD} International Conference on
Knowledge Discovery {\&} Data Mining, {KDD} 2019, Anchorage, AK,
USA, August 4-8, 2019},
pages = {3215--3216},
publisher = {{ACM}},
year = {2019},
url = {https://doi.org/10.1145/3292500.3332286},
doi = {10.1145/3292500.3332286},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kdd/PellegrinaRV19a.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/PellegrinaPV19,
author = {Leonardo Pellegrina and
Cinzia Pizzi and
Fabio Vandin},
editor = {Lenore J. Cowen},
title = {Fast Approximation of Frequent k-mers and Applications to Metagenomics},
booktitle = {Research in Computational Molecular Biology - 23rd Annual International
Conference, {RECOMB} 2019, Washington, DC, USA, May 5-8, 2019, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {11467},
pages = {208--226},
publisher = {Springer},
year = {2019},
url = {https://doi.org/10.1007/978-3-030-17083-7\_13},
doi = {10.1007/978-3-030-17083-7\_13},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/PellegrinaPV19.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/PellegrinaV18,
author = {Leonardo Pellegrina and
Fabio Vandin},
editor = {Yike Guo and
Faisal Farooq},
title = {Efficient Mining of the Most Significant Patterns with Permutation
Testing},
booktitle = {Proceedings of the 24th {ACM} {SIGKDD} International Conference on
Knowledge Discovery {\&} Data Mining, {KDD} 2018, London, UK,
August 19-23, 2018},
pages = {2070--2079},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3219819.3219997},
doi = {10.1145/3219819.3219997},
timestamp = {Tue, 21 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/kdd/PellegrinaV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/kdd/RiondatoV18,
author = {Matteo Riondato and
Fabio Vandin},
editor = {Yike Guo and
Faisal Farooq},
title = {MiSoSouP: Mining Interesting Subgroups with Sampling and Pseudodimension},
booktitle = {Proceedings of the 24th {ACM} {SIGKDD} International Conference on
Knowledge Discovery {\&} Data Mining, {KDD} 2018, London, UK,
August 19-23, 2018},
pages = {2130--2139},
publisher = {{ACM}},
year = {2018},
url = {https://doi.org/10.1145/3219819.3219989},
doi = {10.1145/3219819.3219989},
timestamp = {Sun, 02 Jun 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/kdd/RiondatoV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/BassoHV18,
author = {Rebecca Sarto Basso and
Dorit S. Hochbaum and
Fabio Vandin},
editor = {Benjamin J. Raphael},
title = {Efficient Algorithms to Discover Alterations with Complementary Functional
Association in Cancer},
booktitle = {Research in Computational Molecular Biology - 22nd Annual International
Conference, {RECOMB} 2018, Paris, France, April 21-24, 2018, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {10812},
pages = {278--279},
publisher = {Springer},
year = {2018},
url = {https://link.springer.com/content/pdf/bbm\%3A978-3-319-89929-9\%2F1.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/BassoHV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/HajkarimUV18,
author = {Morteza Chalabi Hajkarim and
Eli Upfal and
Fabio Vandin},
editor = {Laxmi Parida and
Esko Ukkonen},
title = {Differentially Mutated Subnetworks Discovery},
booktitle = {18th International Workshop on Algorithms in Bioinformatics, {WABI}
2018, August 20-22, 2018, Helsinki, Finland},
series = {LIPIcs},
volume = {113},
pages = {18:1--18:14},
publisher = {Schloss Dagstuhl - Leibniz-Zentrum f{\"{u}}r Informatik},
year = {2018},
url = {https://doi.org/10.4230/LIPIcs.WABI.2018.18},
doi = {10.4230/LIPICS.WABI.2018.18},
timestamp = {Tue, 11 Feb 2020 15:52:14 +0100},
biburl = {https://dblp.org/rec/conf/wabi/HajkarimUV18.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/bioinformatics/AlmeidaSSVTRB17,
author = {Diogo Almeida and
Ida Skov and
Artur Silva and
Fabio Vandin and
Qihua Tan and
Richard R{\"{o}}ttger and
Jan Baumbach},
title = {Efficient detection of differentially methylated regions using DiMmeR},
journal = {Bioinform.},
volume = {33},
number = {4},
pages = {549--551},
year = {2017},
url = {https://doi.org/10.1093/bioinformatics/btw657},
doi = {10.1093/BIOINFORMATICS/BTW657},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/bioinformatics/AlmeidaSSVTRB17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/pvldb/CeccarelloFPPV17,
author = {Matteo Ceccarello and
Carlo Fantozzi and
Andrea Pietracaprina and
Geppino Pucci and
Fabio Vandin},
title = {Clustering Uncertain Graphs},
journal = {Proc. {VLDB} Endow.},
volume = {11},
number = {4},
pages = {472--484},
year = {2017},
url = {http://www.vldb.org/pvldb/vol11/p472-ceccarello.pdf},
doi = {10.1145/3186728.3164143},
timestamp = {Sat, 25 Apr 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/pvldb/CeccarelloFPPV17.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/VandinRU16,
author = {Fabio Vandin and
Benjamin J. Raphael and
Eli Upfal},
title = {On the Sample Complexity of Cancer Pathways Identification},
journal = {J. Comput. Biol.},
volume = {23},
number = {1},
pages = {30--41},
year = {2016},
url = {https://doi.org/10.1089/cmb.2015.0100},
doi = {10.1089/CMB.2015.0100},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/VandinRU16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jib/AlmeidaSLMSVTBR16,
author = {Diogo Almeida and
Ida Skov and
Jesper Lund and
Afsaneh Mohammadnejad and
Artur Silva and
Fabio Vandin and
Qihua Tan and
Jan Baumbach and
Richard R{\"{o}}ttger},
title = {Jllumina - {A} comprehensive Java-based {API} for statistical Illumina
Infinium HumanMethylation450 and MethylationEPIC data processing},
journal = {J. Integr. Bioinform.},
volume = {13},
number = {4},
year = {2016},
url = {https://doi.org/10.2390/biecoll-jib-2016-294},
doi = {10.2390/BIECOLL-JIB-2016-294},
timestamp = {Mon, 05 Feb 2024 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jib/AlmeidaSLMSVTBR16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/aaai/StefaniEUV16,
author = {Lorenzo De Stefani and
Alessandro Epasto and
Eli Upfal and
Fabio Vandin},
editor = {Dale Schuurmans and
Michael P. Wellman},
title = {Reconstructing Hidden Permutations Using the Average-Precision {(AP)}
Correlation Statistic},
booktitle = {Proceedings of the Thirtieth {AAAI} Conference on Artificial Intelligence,
February 12-17, 2016, Phoenix, Arizona, {USA}},
pages = {1526--1532},
publisher = {{AAAI} Press},
year = {2016},
url = {https://doi.org/10.1609/aaai.v30i1.10236},
doi = {10.1609/AAAI.V30I1.10236},
timestamp = {Mon, 04 Sep 2023 15:08:28 +0200},
biburl = {https://dblp.org/rec/conf/aaai/StefaniEUV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HormozdiariHKMV16,
author = {Farhad Hormozdiari and
Fereydoun Hormozdiari and
Carl Kingsford and
Paul Medvedev and
Fabio Vandin},
editor = {Mona Singh},
title = {The Second Decade of the International Conference on Research in Computational
Molecular Biology {(RECOMB)}},
booktitle = {Research in Computational Molecular Biology - 20th Annual Conference,
{RECOMB} 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9649},
pages = {3--16},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-31957-5\_1},
doi = {10.1007/978-3-319-31957-5\_1},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HormozdiariHKMV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HansenV16,
author = {Tommy Hansen and
Fabio Vandin},
editor = {Mona Singh},
title = {Finding Mutated Subnetworks Associated with Survival in Cancer},
booktitle = {Research in Computational Molecular Biology - 20th Annual Conference,
{RECOMB} 2016, Santa Monica, CA, USA, April 17-21, 2016, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9649},
pages = {250},
publisher = {Springer},
year = {2016},
url = {https://link.springer.com/content/pdf/bbm\%3A978-3-319-31957-5\%2F1.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/recomb/HansenV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/BomersbachCV16,
author = {Anna Bomersbach and
Marco Chiarandini and
Fabio Vandin},
editor = {Martin C. Frith and
Christian N{\o}rgaard Storm Pedersen},
title = {An Efficient Branch and Cut Algorithm to Find Frequently Mutated Subnetworks
in Cancer},
booktitle = {Algorithms in Bioinformatics - 16th International Workshop, {WABI}
2016, Aarhus, Denmark, August 22-24, 2016. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9838},
pages = {27--39},
publisher = {Springer},
year = {2016},
url = {https://doi.org/10.1007/978-3-319-43681-4\_3},
doi = {10.1007/978-3-319-43681-4\_3},
timestamp = {Tue, 14 May 2019 10:00:40 +0200},
biburl = {https://dblp.org/rec/conf/wabi/BomersbachCV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/CeccarelloFPPV16,
author = {Matteo Ceccarello and
Carlo Fantozzi and
Andrea Pietracaprina and
Geppino Pucci and
Fabio Vandin},
title = {Clustering Uncertain Graphs},
journal = {CoRR},
volume = {abs/1612.06675},
year = {2016},
url = {http://arxiv.org/abs/1612.06675},
eprinttype = {arXiv},
eprint = {1612.06675},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/CeccarelloFPPV16.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/RaphaelV15,
author = {Benjamin J. Raphael and
Fabio Vandin},
title = {Simultaneous Inference of Cancer Pathways and Tumor Progression from
Cross-Sectional Mutation Data},
journal = {J. Comput. Biol.},
volume = {22},
number = {6},
pages = {510--527},
year = {2015},
url = {https://doi.org/10.1089/cmb.2014.0161},
doi = {10.1089/CMB.2014.0161},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/RaphaelV15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jpdc/PietracaprinaPS15,
author = {Andrea Pietracaprina and
Geppino Pucci and
Francesco Silvestri and
Fabio Vandin},
title = {Space-efficient parallel algorithms for combinatorial search problems},
journal = {J. Parallel Distributed Comput.},
volume = {76},
pages = {58--65},
year = {2015},
url = {https://doi.org/10.1016/j.jpdc.2014.09.007},
doi = {10.1016/J.JPDC.2014.09.007},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jpdc/PietracaprinaPS15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/ploscb/VandinPRU15,
author = {Fabio Vandin and
Alexandra Papoutsaki and
Benjamin J. Raphael and
Eli Upfal},
title = {Accurate Computation of Survival Statistics in Genome-Wide Studies},
journal = {PLoS Comput. Biol.},
volume = {11},
number = {5},
year = {2015},
url = {https://doi.org/10.1371/journal.pcbi.1004071},
doi = {10.1371/JOURNAL.PCBI.1004071},
timestamp = {Thu, 10 Sep 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/ploscb/VandinPRU15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/LeisersonWVR15,
author = {Mark D. M. Leiserson and
Hsin{-}Ta Wu and
Fabio Vandin and
Benjamin J. Raphael},
editor = {Teresa M. Przytycka},
title = {CoMEt: {A} Statistical Approach to Identify Combinations of Mutually
Exclusive Alterations in Cancer},
booktitle = {Research in Computational Molecular Biology - 19th Annual International
Conference, {RECOMB} 2015, Warsaw, Poland, April 12-15, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9029},
pages = {202--204},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-16706-0\_19},
doi = {10.1007/978-3-319-16706-0\_19},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/LeisersonWVR15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/VandinRU15,
author = {Fabio Vandin and
Benjamin J. Raphael and
Eli Upfal},
editor = {Teresa M. Przytycka},
title = {On the Sample Complexity of Cancer Pathways Identification},
booktitle = {Research in Computational Molecular Biology - 19th Annual International
Conference, {RECOMB} 2015, Warsaw, Poland, April 12-15, 2015, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {9029},
pages = {326--337},
publisher = {Springer},
year = {2015},
url = {https://doi.org/10.1007/978-3-319-16706-0\_33},
doi = {10.1007/978-3-319-16706-0\_33},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/VandinRU15.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/RaphaelV14,
author = {Benjamin J. Raphael and
Fabio Vandin},
editor = {Roded Sharan},
title = {Simultaneous Inference of Cancer Pathways and Tumor Progression from
Cross-Sectional Mutation Data},
booktitle = {Research in Computational Molecular Biology - 18th Annual International
Conference, {RECOMB} 2014, Pittsburgh, PA, USA, April 2-5, 2014, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8394},
pages = {250--264},
publisher = {Springer},
year = {2014},
url = {https://doi.org/10.1007/978-3-319-05269-4\_20},
doi = {10.1007/978-3-319-05269-4\_20},
timestamp = {Mon, 13 May 2019 09:30:09 +0200},
biburl = {https://dblp.org/rec/conf/recomb/RaphaelV14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/sdm/RiondatoV14,
author = {Matteo Riondato and
Fabio Vandin},
editor = {Mohammed Javeed Zaki and
Zoran Obradovic and
Pang{-}Ning Tan and
Arindam Banerjee and
Chandrika Kamath and
Srinivasan Parthasarathy},
title = {Finding the True Frequent Itemsets},
booktitle = {Proceedings of the 2014 {SIAM} International Conference on Data Mining,
Philadelphia, Pennsylvania, USA, April 24-26, 2014},
pages = {497--505},
publisher = {{SIAM}},
year = {2014},
url = {https://doi.org/10.1137/1.9781611973440.57},
doi = {10.1137/1.9781611973440.57},
timestamp = {Fri, 06 Oct 2023 11:45:43 +0200},
biburl = {https://dblp.org/rec/conf/sdm/RiondatoV14.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/HeVPB13,
author = {Lu He and
Fabio Vandin and
Gopal Pandurangan and
Chris Bailey{-}Kellogg},
title = {Ballast: {A} Ball-based Algorithm for Structural Motifs},
journal = {J. Comput. Biol.},
volume = {20},
number = {2},
pages = {137--151},
year = {2013},
url = {https://doi.org/10.1089/cmb.2012.0246},
doi = {10.1089/CMB.2012.0246},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/jcb/HeVPB13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/VandinUR13,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
title = {Identifying significant mutations in large cohorts of cancer genomes},
booktitle = {{IEEE} 3rd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2013, New Orleans, LA, USA, June 12-14,
2013},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2013},
url = {https://doi.org/10.1109/ICCABS.2013.6629238},
doi = {10.1109/ICCABS.2013.6629238},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/VandinUR13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/mfcs/PietracaprinaPSV13,
author = {Andrea Pietracaprina and
Geppino Pucci and
Francesco Silvestri and
Fabio Vandin},
editor = {Krishnendu Chatterjee and
Jir{\'{\i}} Sgall},
title = {Space-Efficient Parallel Algorithms for Combinatorial Search Problems},
booktitle = {Mathematical Foundations of Computer Science 2013 - 38th International
Symposium, {MFCS} 2013, Klosterneuburg, Austria, August 26-30, 2013.
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {8087},
pages = {717--728},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-40313-2\_63},
doi = {10.1007/978-3-642-40313-2\_63},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/mfcs/PietracaprinaPSV13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/VandinPRU13,
author = {Fabio Vandin and
Alexandra Papoutsaki and
Benjamin J. Raphael and
Eli Upfal},
editor = {Minghua Deng and
Rui Jiang and
Fengzhu Sun and
Xuegong Zhang},
title = {Genome-Wide Survival Analysis of Somatic Mutations in Cancer},
booktitle = {Research in Computational Molecular Biology - 17th Annual International
Conference, {RECOMB} 2013, Beijing, China, April 7-10, 2013. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7821},
pages = {285--286},
publisher = {Springer},
year = {2013},
url = {https://doi.org/10.1007/978-3-642-37195-0\_26},
doi = {10.1007/978-3-642-37195-0\_26},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/VandinPRU13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1301-1218,
author = {Matteo Riondato and
Fabio Vandin},
title = {Controlling False Positives in Frequent Itemsets Mining through the
VC-Dimension},
journal = {CoRR},
volume = {abs/1301.1218},
year = {2013},
url = {http://arxiv.org/abs/1301.1218},
eprinttype = {arXiv},
eprint = {1301.1218},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1301-1218.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/PietracaprinaPSV13,
author = {Andrea Pietracaprina and
Geppino Pucci and
Francesco Silvestri and
Fabio Vandin},
title = {Space-Efficient Parallel Algorithms for Combinatorial Search Problems},
journal = {CoRR},
volume = {abs/1306.2552},
year = {2013},
url = {http://arxiv.org/abs/1306.2552},
eprinttype = {arXiv},
eprint = {1306.2552},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/PietracaprinaPSV13.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/almob/VandinUR12,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
title = {Finding Driver Pathways in Cancer: Models and Algorithms},
journal = {Algorithms Mol. Biol.},
volume = {7},
pages = {23},
year = {2012},
url = {https://doi.org/10.1186/1748-7188-7-23},
doi = {10.1186/1748-7188-7-23},
timestamp = {Fri, 13 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/almob/VandinUR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/computer/VandinUR12,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
title = {Algorithms and Genome Sequencing: Identifying Driver Pathways in Cancer},
journal = {Computer},
volume = {45},
number = {3},
pages = {39--46},
year = {2012},
url = {https://doi.org/10.1109/MC.2012.71},
doi = {10.1109/MC.2012.71},
timestamp = {Wed, 12 Aug 2020 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/computer/VandinUR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jacm/KirschMPPUV12,
author = {Adam Kirsch and
Michael Mitzenmacher and
Andrea Pietracaprina and
Geppino Pucci and
Eli Upfal and
Fabio Vandin},
title = {An Efficient Rigorous Approach for Identifying Statistically Significant
Frequent Itemsets},
journal = {J. {ACM}},
volume = {59},
number = {3},
pages = {12:1--12:22},
year = {2012},
url = {https://doi.org/10.1145/2220357.2220359},
doi = {10.1145/2220357.2220359},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jacm/KirschMPPUV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/iccabs/VandinUR12,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
editor = {Sorin Istrail and
Ion I. Mandoiu and
Mihai Pop and
Sanguthevar Rajasekaran and
John L. Spouge},
title = {Workshop: Algorithms for discovery of mutated pathways in cancer},
booktitle = {{IEEE} 2nd International Conference on Computational Advances in Bio
and Medical Sciences, {ICCABS} 2012, Las Vegas, NV, USA, February
23-25, 2012},
pages = {1},
publisher = {{IEEE} Computer Society},
year = {2012},
url = {https://doi.org/10.1109/ICCABS.2012.6182678},
doi = {10.1109/ICCABS.2012.6182678},
timestamp = {Thu, 23 Mar 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/iccabs/VandinUR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/innovations/AnagnostopoulosKMUV12,
author = {Aris Anagnostopoulos and
Ravi Kumar and
Mohammad Mahdian and
Eli Upfal and
Fabio Vandin},
editor = {Shafi Goldwasser},
title = {Algorithms on evolving graphs},
booktitle = {Innovations in Theoretical Computer Science 2012, Cambridge, MA, USA,
January 8-10, 2012},
pages = {149--160},
publisher = {{ACM}},
year = {2012},
url = {https://doi.org/10.1145/2090236.2090249},
doi = {10.1145/2090236.2090249},
timestamp = {Mon, 28 Aug 2023 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/innovations/AnagnostopoulosKMUV12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/psb/VandinCUR12,
author = {Fabio Vandin and
Patrick Clay and
Eli Upfal and
Benjamin J. Raphael},
editor = {Russ B. Altman and
A. Keith Dunker and
Lawrence Hunter and
Tiffany Murray and
Teri E. Klein},
title = {Discovery of Mutated Subnetworks Associated with Clinical Data in
Cancer},
booktitle = {Biocomputing 2012: Proceedings of the Pacific Symposium, Kohala Coast,
Hawaii, USA, January 3-7, 2012},
pages = {55--66},
publisher = {World Scientific Publishing},
year = {2012},
url = {http://psb.stanford.edu/psb-online/proceedings/psb12/vandin.pdf},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/psb/VandinCUR12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/HeVPB12,
author = {Lu He and
Fabio Vandin and
Gopal Pandurangan and
Chris Bailey{-}Kellogg},
editor = {Benny Chor},
title = {Ballast: {A} Ball-Based Algorithm for Structural Motifs},
booktitle = {Research in Computational Molecular Biology - 16th Annual International
Conference, {RECOMB} 2012, Barcelona, Spain, April 21-24, 2012. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {7262},
pages = {79--93},
publisher = {Springer},
year = {2012},
url = {https://doi.org/10.1007/978-3-642-29627-7\_9},
doi = {10.1007/978-3-642-29627-7\_9},
timestamp = {Sat, 09 Apr 2022 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/HeVPB12.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/VandinUR11,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
title = {Algorithms for Detecting Significantly Mutated Pathways in Cancer},
journal = {J. Comput. Biol.},
volume = {18},
number = {3},
pages = {507--522},
year = {2011},
url = {https://doi.org/10.1089/cmb.2010.0265},
doi = {10.1089/CMB.2010.0265},
timestamp = {Thu, 12 Mar 2020 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/VandinUR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/jcb/GrossiPPPUV11,
author = {Roberto Grossi and
Andrea Pietracaprina and
Nadia Pisanti and
Geppino Pucci and
Eli Upfal and
Fabio Vandin},
title = {{MADMX:} {A} Strategy for Maximal Dense Motif Extraction},
journal = {J. Comput. Biol.},
volume = {18},
number = {4},
pages = {535--545},
year = {2011},
url = {https://doi.org/10.1089/cmb.2010.0177},
doi = {10.1089/CMB.2010.0177},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/journals/jcb/GrossiPPPUV11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/VandinUR11,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
editor = {Vineet Bafna and
S{\"{u}}leyman Cenk Sahinalp},
title = {\emph{De Novo} Discovery of Mutated Driver Pathways in Cancer},
booktitle = {Research in Computational Molecular Biology - 15th Annual International
Conference, {RECOMB} 2011, Vancouver, BC, Canada, March 28-31, 2011.
Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6577},
pages = {499--500},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-20036-6\_44},
doi = {10.1007/978-3-642-20036-6\_44},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/VandinUR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/VandinUR11,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
editor = {Teresa M. Przytycka and
Marie{-}France Sagot},
title = {Finding Driver Pathways in Cancer: Models and Algorithms},
booktitle = {Algorithms in Bioinformatics - 11th International Workshop, {WABI}
2011, Saarbr{\"{u}}cken, Germany, September 5-7, 2011. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6833},
pages = {314--325},
publisher = {Springer},
year = {2011},
url = {https://doi.org/10.1007/978-3-642-23038-7\_26},
doi = {10.1007/978-3-642-23038-7\_26},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/wabi/VandinUR11.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/datamine/PietracaprinaRUV10,
author = {Andrea Pietracaprina and
Matteo Riondato and
Eli Upfal and
Fabio Vandin},
title = {Mining top-\emph{K} frequent itemsets through progressive sampling},
journal = {Data Min. Knowl. Discov.},
volume = {21},
number = {2},
pages = {310--326},
year = {2010},
url = {https://doi.org/10.1007/s10618-010-0185-7},
doi = {10.1007/S10618-010-0185-7},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/datamine/PietracaprinaRUV10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/recomb/VandinUR10,
author = {Fabio Vandin and
Eli Upfal and
Benjamin J. Raphael},
editor = {Bonnie Berger},
title = {Algorithms for Detecting Significantly Mutated Pathways in Cancer},
booktitle = {Research in Computational Molecular Biology, 14th Annual International
Conference, {RECOMB} 2010, Lisbon, Portugal, April 25-28, 2010. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {6044},
pages = {506--521},
publisher = {Springer},
year = {2010},
url = {https://doi.org/10.1007/978-3-642-12683-3\_33},
doi = {10.1007/978-3-642-12683-3\_33},
timestamp = {Mon, 16 Sep 2019 01:00:00 +0200},
biburl = {https://dblp.org/rec/conf/recomb/VandinUR10.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1002-0874,
author = {Roberto Grossi and
Andrea Pietracaprina and
Nadia Pisanti and
Geppino Pucci and
Eli Upfal and
Fabio Vandin},
title = {{MADMX:} {A} Novel Strategy for Maximal Dense Motif Extraction},
journal = {CoRR},
volume = {abs/1002.0874},
year = {2010},
url = {http://arxiv.org/abs/1002.0874},
eprinttype = {arXiv},
eprint = {1002.0874},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1002-0874.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1002-1104,
author = {Adam Kirsch and
Michael Mitzenmacher and
Andrea Pietracaprina and
Geppino Pucci and
Eli Upfal and
Fabio Vandin},
title = {An Efficient Rigorous Approach for Identifying Statistically Significant
Frequent Itemsets},
journal = {CoRR},
volume = {abs/1002.1104},
year = {2010},
url = {http://arxiv.org/abs/1002.1104},
eprinttype = {arXiv},
eprint = {1002.1104},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1002-1104.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@article{DBLP:journals/corr/abs-1006-5235,
author = {Andrea Pietracaprina and
Matteo Riondato and
Eli Upfal and
Fabio Vandin},
title = {Mining Top-K Frequent Itemsets Through Progressive Sampling},
journal = {CoRR},
volume = {abs/1006.5235},
year = {2010},
url = {http://arxiv.org/abs/1006.5235},
eprinttype = {arXiv},
eprint = {1006.5235},
timestamp = {Mon, 13 Aug 2018 01:00:00 +0200},
biburl = {https://dblp.org/rec/journals/corr/abs-1006-5235.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/pods/KirschMPPUV09,
author = {Adam Kirsch and
Michael Mitzenmacher and
Andrea Pietracaprina and
Geppino Pucci and
Eli Upfal and
Fabio Vandin},
editor = {Jan Paredaens and
Jianwen Su},
title = {An efficient rigorous approach for identifying statistically significant
frequent itemsets},
booktitle = {Proceedings of the Twenty-Eigth {ACM} {SIGMOD-SIGACT-SIGART} Symposium
on Principles of Database Systems, {PODS} 2009, June 19 - July 1,
2009, Providence, Rhode Island, {USA}},
pages = {117--126},
publisher = {{ACM}},
year = {2009},
url = {https://doi.org/10.1145/1559795.1559814},
doi = {10.1145/1559795.1559814},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/pods/KirschMPPUV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/wabi/GrossiPPPUV09,
author = {Roberto Grossi and
Andrea Pietracaprina and
Nadia Pisanti and
Geppino Pucci and
Eli Upfal and
Fabio Vandin},
editor = {Steven Salzberg and
Tandy J. Warnow},
title = {{MADMX:} {A} Novel Strategy for Maximal Dense Motif Extraction},
booktitle = {Algorithms in Bioinformatics, 9th International Workshop, {WABI} 2009,
Philadelphia, PA, USA, September 12-13, 2009. Proceedings},
series = {Lecture Notes in Computer Science},
volume = {5724},
pages = {362--374},
publisher = {Springer},
year = {2009},
url = {https://doi.org/10.1007/978-3-642-04241-6\_30},
doi = {10.1007/978-3-642-04241-6\_30},
timestamp = {Sun, 12 Nov 2023 00:00:00 +0100},
biburl = {https://dblp.org/rec/conf/wabi/GrossiPPPUV09.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
@inproceedings{DBLP:conf/dis/PietracaprinaV07,
author = {Andrea Pietracaprina and
Fabio Vandin},
editor = {Vincent Corruble and
Masayuki Takeda and
Einoshin Suzuki},
title = {Efficient Incremental Mining of Top-K Frequent Closed Itemsets},
booktitle = {Discovery Science, 10th International Conference, {DS} 2007, Sendai,
Japan, October 1-4, 2007, Proceedings},
series = {Lecture Notes in Computer Science},
volume = {4755},
pages = {275--280},
publisher = {Springer},
year = {2007},
url = {https://doi.org/10.1007/978-3-540-75488-6\_29},
doi = {10.1007/978-3-540-75488-6\_29},
timestamp = {Tue, 14 May 2019 10:00:46 +0200},
biburl = {https://dblp.org/rec/conf/dis/PietracaprinaV07.bib},
bibsource = {dblp computer science bibliography, https://dblp.org}
}
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